RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PDE4BQ07343 736 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 CCL15Q16663 113 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 VPS53Q5VIR6 699 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 NOL8Q76FK4 1167 aaKnown RBP8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 ALDH8A1Q9H2A2 487 aaPredicted RBP8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 SRCAPQ6ZRS2 3230 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 TTC41PQ6P2S7 1318 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 ECM29Q5VYK3 1845 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 TNS1Q9HBL0 1735 aaKnown RBP8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 TSPY2A6NKD2 308 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 HIP1O00291 1037 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 CCDC96Q2M329 555 aa8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 WDR33Q9C0J8 1336 aaKnown RBP8.65□□□□□ -1.02
CDC42BPA-208ENST00000442054 ZFYP08048 801 aaPredicted RBP8.65□□□□□ -1.03
CDC42BPA-208ENST00000442054 KIF23Q02241 960 aaPredicted RBP8.65□□□□□ -1.03
CDC42BPA-208ENST00000442054 NFXL1Q6ZNB6 911 aa8.65□□□□□ -1.03
CDC42BPA-208ENST00000442054 ARMT1Q9H993 441 aa8.65□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZKSCAN5Q9Y2L8 839 aa8.65□□□□□ -1.03
CDC42BPA-208ENST00000442054 SPEF2Q9C093 1822 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 SYCE3A1L190 88 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 MCCP23508 829 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 PTH1RQ03431 593 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 DLK2Q6UY11 383 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 TMEM106CQ9BVX2 250 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 TANGO6Q9C0B7 1094 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZFYVE28Q9HCC9 887 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 CASP7P55210 303 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 TM6SF1Q9BZW5 370 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 SH2D4AQ9H788 454 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 PI4KBQ9UBF8 816 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 MYH14Q7Z406 1995 aaKnown RBP8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 FAM196BA6NMK8 535 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 AOC2O75106 756 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 ALDH1A1P00352 501 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 MCM5P33992 734 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 ADCK5Q3MIX3 580 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 CWC27Q6UX04 472 aaKnown RBP8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 KLRG1Q96E93 195 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 FZD1Q9UP38 647 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 DAGLAQ9Y4D2 1042 aa8.64□□□□□ -1.03
CDC42BPA-208ENST00000442054 RRP9O43818 475 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 HOXD10P28358 340 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 VEGFBP49765 207 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 AK2P54819 239 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 SART3Q15020 963 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 CERKLQ49MI3 558 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 HHIPL2Q6UWX4 724 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 DHX36Q9H2U1 1008 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 ANO2Q9NQ90 1003 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 DBNLQ9UJU6 430 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 TOGARAM1Q9Y4F4 1720 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZNF532Q9HCE3 1301 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 MBD3O95983 291 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 TSPY3P0CV98 308 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 TSPY8P0CW00 308 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 IL1R1P14778 569 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 FKBP1BP68106 108 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 HDLBPQ00341 1268 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 SPP2Q13103 211 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 SNAPC2Q13487 334 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 FAM151AQ8WW52 585 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 GPR108Q9NPR9 543 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 PPP2R3BQ9Y5P8 575 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 SBF2Q86WG5 1849 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 MANSC4A6NHS7 340 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 GOLGA6L22H0YM25 854 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 GDF11O95390 407 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 OSBPP22059 807 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 ATG9AQ7Z3C6 839 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 EDC3Q96F86 508 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 UPF3BQ9BZI7 483 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 ASTN2O75129 1339 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 RTL9Q8NET4 1388 aa8.63□□□□□ -1.03
CDC42BPA-208ENST00000442054 TPM2P07951 284 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 CHMP4BP1P59074 171 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 DYNLL1P63167 89 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 VTI1AQ96AJ9 217 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 UBAC1Q9BSL1 405 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 PNMA3Q9UL41 463 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 EGFRP00533 1210 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 LBX1P52954 281 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 DGKZQ13574 1117 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 CDC42EP5Q6NZY7 148 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZKSCAN4Q969J2 545 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 MTMR6Q9Y217 621 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 TAF6LQ9Y6J9 622 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 CA12O43570 354 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 ASNSP08243 561 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 CETPP11597 493 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 PDE6AP16499 860 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 SYT1P21579 422 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 RBM43Q6ZSC3 357 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 FOXP4Q8IVH2 680 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 RAET1EQ8TD07 263 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 MAP4K1Q92918 833 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 CTNNA3Q9UI47 895 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms