RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ZMYM1Q5SVZ6 1142 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 ERICH6BQ5W0A0 696 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 ERO1BQ86YB8 467 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 SDR42E1Q8WUS8 393 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 OPTNQ96CV9 577 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 DDRGK1Q96HY6 314 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 STRBPQ96SI9 672 aaKnown RBP14.21□□□□□ -0.13
HSPG2-206ENST00000439717 ZIC5Q96T25 663 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 BEGAINQ9BUH8 593 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 TRIM34Q9BYJ4 488 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 EHD4Q9H223 541 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 DCP1AQ9NPI6 582 aaPredicted RBP14.21□□□□□ -0.13
HSPG2-206ENST00000439717 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 CA12O43570 354 aa14.2□□□□□ -0.14
HSPG2-206ENST00000439717 POLR3DP05423 398 aaPredicted RBP14.2□□□□□ -0.14
HSPG2-206ENST00000439717 HSPA1AP0DMV8 641 aaKnown RBP14.2□□□□□ -0.14
HSPG2-206ENST00000439717 HSPA1BP0DMV9 641 aaKnown RBP14.2□□□□□ -0.14
HSPG2-206ENST00000439717 GNAT2P19087 354 aa14.2□□□□□ -0.14
HSPG2-206ENST00000439717 TM4SF4P48230 202 aa14.2□□□□□ -0.14
HSPG2-206ENST00000439717 PPATQ06203 517 aa14.2□□□□□ -0.14
HSPG2-206ENST00000439717 GIMAP6Q6P9H5 292 aa14.2□□□□□ -0.14
HSPG2-206ENST00000439717 SCYL3Q8IZE3 742 aa14.2□□□□□ -0.14
HSPG2-206ENST00000439717 CRACR2BQ8N4Y2 399 aaPredicted RBP14.2□□□□□ -0.14
HSPG2-206ENST00000439717 MCM9Q9NXL9 1143 aa14.2□□□□□ -0.14
HSPG2-206ENST00000439717 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
HSPG2-206ENST00000439717 SLC4A4Q9Y6R1 1079 aa14.2□□□□□ -0.14
HSPG2-206ENST00000439717 GPAA1O43292 621 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 PRKAB2O43741 272 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 GJA5P36382 358 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 MKRN3Q13064 507 aaKnown RBP14.19□□□□□ -0.14
HSPG2-206ENST00000439717 PPIL2Q13356 520 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 AMOTL1Q8IY63 956 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 RILPL2Q969X0 211 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 CCDC136Q96JN2 1154 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 PICK1Q9NRD5 415 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 HELLSQ9NRZ9 838 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
HSPG2-206ENST00000439717 PCNTO95613 3336 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 DDX60LQ5H9U9 1706 aaKnown RBP14.18□□□□□ -0.14
HSPG2-206ENST00000439717 MYH1P12882 1939 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 FAM196BA6NMK8 535 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 M0R2C6 588 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 SLURP2P0DP57 97 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 GTF2A2P52657 109 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 GINM1Q9NU53 330 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 SAGE1Q9NXZ1 904 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 NAV1Q8NEY1 1877 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 SIPA1L1O43166 1804 aa14.18□□□□□ -0.14
HSPG2-206ENST00000439717 TESPA1A2RU30 521 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-206ENST00000439717 GSG1L2A8MUP6 293 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 PATL2C9JE40 543 aaKnown RBP14.17□□□□□ -0.14
HSPG2-206ENST00000439717 HIP1O00291 1037 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 PTPRAP18433 802 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 CAP2P40123 477 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 PLCD1P51178 756 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 TATDN1Q6P1N9 297 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 CNKSR2Q8WXI2 1034 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 SEC62Q99442 399 aaKnown RBP14.17□□□□□ -0.14
HSPG2-206ENST00000439717 TBC1D2Q9BYX2 928 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 DNAJC18Q9H819 358 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 ARPP21Q9UBL0 812 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-206ENST00000439717 LAMB1P07942 1786 aa14.17□□□□□ -0.14
HSPG2-206ENST00000439717 CXCL11O14625 94 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 SDSP20132 328 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 CTCFP49711 727 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-206ENST00000439717 GABPAQ06546 454 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 SNAPC2Q13487 334 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 SLC4A8Q2Y0W8 1093 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 MCMDC2Q4G0Z9 681 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 SBK1Q52WX2 424 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 MS4A4AQ96JQ5 239 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 RNF186Q9NXI6 227 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 SWAP70Q9UH65 585 aa14.16□□□□□ -0.14
HSPG2-206ENST00000439717 DOCK1Q14185 1865 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 USP17L12C9JPN9 530 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 USP17L21D6R901 530 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 IRF6O14896 467 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 FOXN1O15353 648 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 ALDH1A1P00352 501 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 ASNSP08243 561 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 CETPP11597 493 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
HSPG2-206ENST00000439717 RRP1BQ14684 758 aaKnown RBP14.15□□□□□ -0.14
HSPG2-206ENST00000439717 C12orf60Q5U649 245 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 OTUD7BQ6GQQ9 843 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 CTR9Q6PD62 1173 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 NACAP1Q9BZK3 213 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 KCNH4Q9UQ05 1017 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 ZHX2Q9Y6X8 837 aa14.15□□□□□ -0.14
HSPG2-206ENST00000439717 CCL15-CCL14A0A0B4J2E2 113 aa14.14□□□□□ -0.15
HSPG2-206ENST00000439717 USP17L5A8MUK1 530 aa14.14□□□□□ -0.15
HSPG2-206ENST00000439717 APPP05067 770 aa14.14□□□□□ -0.15
HSPG2-206ENST00000439717 CYP2D6P10635 497 aa14.14□□□□□ -0.15
HSPG2-206ENST00000439717 TDO2P48775 406 aa14.14□□□□□ -0.15
HSPG2-206ENST00000439717 MFAP1P55081 439 aaKnown RBP14.14□□□□□ -0.15
HSPG2-206ENST00000439717 NMIQ13287 307 aaPredicted RBP14.14□□□□□ -0.15
HSPG2-206ENST00000439717 CCL15Q16663 113 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms