RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.43■■□□□ 1.34
SEMA3B-206ENST00000439487 SLC4A4Q9Y6R1 1079 aa23.43■■□□□ 1.34
SEMA3B-206ENST00000439487 MYH8P13535 1937 aa23.43■■□□□ 1.34
SEMA3B-206ENST00000439487 DOCK1Q14185 1865 aa23.43■■□□□ 1.34
SEMA3B-206ENST00000439487 PHF20L1A8MW92 1017 aa23.42■■□□□ 1.34
SEMA3B-206ENST00000439487 TBC1D12O60347 775 aa23.42■■□□□ 1.34
SEMA3B-206ENST00000439487 KIF23Q02241 960 aaPredicted RBP23.42■■□□□ 1.34
SEMA3B-206ENST00000439487 WNK4Q96J92 1243 aa23.42■■□□□ 1.34
SEMA3B-206ENST00000439487 DCP1AQ9NPI6 582 aaPredicted RBP23.42■■□□□ 1.34
SEMA3B-206ENST00000439487 GPAA1O43292 621 aa23.41■■□□□ 1.34
SEMA3B-206ENST00000439487 HLA-DOAP06340 250 aa23.41■■□□□ 1.34
SEMA3B-206ENST00000439487 TTC22Q5TAA0 569 aa23.41■■□□□ 1.34
SEMA3B-206ENST00000439487 SPRYD7Q5W111 196 aa23.41■■□□□ 1.34
SEMA3B-206ENST00000439487 SKAP1Q86WV1 359 aa23.41■■□□□ 1.34
SEMA3B-206ENST00000439487 CNKSR2Q8WXI2 1034 aa23.41■■□□□ 1.34
SEMA3B-206ENST00000439487 MCM9Q9NXL9 1143 aa23.41■■□□□ 1.34
SEMA3B-206ENST00000439487 SNCAIPQ9Y6H5 919 aa23.41■■□□□ 1.34
SEMA3B-206ENST00000439487 LAMB1P07942 1786 aa23.4■■□□□ 1.34
SEMA3B-206ENST00000439487 POLR3DP05423 398 aaPredicted RBP23.4■■□□□ 1.34
SEMA3B-206ENST00000439487 GJA5P36382 358 aa23.4■■□□□ 1.34
SEMA3B-206ENST00000439487 FOXP4Q8IVH2 680 aaPredicted RBP23.4■■□□□ 1.34
SEMA3B-206ENST00000439487 ATP8A2Q9NTI2 1148 aa23.4■■□□□ 1.34
SEMA3B-206ENST00000439487 PHIPQ8WWQ0 1821 aa23.39■■□□□ 1.33
SEMA3B-206ENST00000439487 GSPT1P15170 499 aaKnown RBP23.39■■□□□ 1.33
SEMA3B-206ENST00000439487 PLCD1P51178 756 aa23.39■■□□□ 1.33
SEMA3B-206ENST00000439487 ERICH6BQ5W0A0 696 aa23.39■■□□□ 1.33
SEMA3B-206ENST00000439487 TTC6Q86TZ1 520 aa23.39■■□□□ 1.33
SEMA3B-206ENST00000439487 CRACR2BQ8N4Y2 399 aaPredicted RBP23.39■■□□□ 1.33
SEMA3B-206ENST00000439487 OPTNQ96CV9 577 aa23.39■■□□□ 1.33
SEMA3B-206ENST00000439487 HERC5Q9UII4 1024 aaKnown RBP23.39■■□□□ 1.33
SEMA3B-206ENST00000439487 CYP2D6P10635 497 aa23.38■■□□□ 1.33
SEMA3B-206ENST00000439487 EVX2Q03828 476 aa23.38■■□□□ 1.33
SEMA3B-206ENST00000439487 CCDC129Q6ZRS4 1044 aa23.38■■□□□ 1.33
SEMA3B-206ENST00000439487 FAM227BQ96M60 508 aa23.38■■□□□ 1.33
SEMA3B-206ENST00000439487 TRIM34Q9BYJ4 488 aa23.38■■□□□ 1.33
SEMA3B-206ENST00000439487 DNAJC18Q9H819 358 aa23.38■■□□□ 1.33
SEMA3B-206ENST00000439487 PPP4R2Q9NY27 417 aa23.38■■□□□ 1.33
SEMA3B-206ENST00000439487 GSG1L2A8MUP6 293 aa23.37■■□□□ 1.33
SEMA3B-206ENST00000439487 ZBTB48P10074 688 aaPredicted RBP23.37■■□□□ 1.33
SEMA3B-206ENST00000439487 SDSP20132 328 aa23.37■■□□□ 1.33
SEMA3B-206ENST00000439487 RRP1BQ14684 758 aaKnown RBP23.37■■□□□ 1.33
SEMA3B-206ENST00000439487 NOL9Q5SY16 702 aaKnown RBP23.37■■□□□ 1.33
SEMA3B-206ENST00000439487 METTL16Q86W50 562 aaKnown RBP23.37■■□□□ 1.33
SEMA3B-206ENST00000439487 OTUD5Q96G74 571 aa23.37■■□□□ 1.33
SEMA3B-206ENST00000439487 A0A0D9SFI3 127 aa23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 SPDYE5A6NIY4 337 aa23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 MAP2K1Q02750 393 aaPredicted RBP23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 NMIQ13287 307 aaPredicted RBP23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 TICAM2Q86XR7 235 aa23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 ERO1BQ86YB8 467 aa23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 SCYL3Q8IZE3 742 aa23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 DDRGK1Q96HY6 314 aa23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 HELLSQ9NRZ9 838 aa23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 WBP1LQ9NX94 342 aa23.36■■□□□ 1.33
SEMA3B-206ENST00000439487 CYP2D7A0A087X1C5 515 aa23.35■■□□□ 1.33
SEMA3B-206ENST00000439487 CTNND1O60716 968 aaKnown RBP23.35■■□□□ 1.33
SEMA3B-206ENST00000439487 GNAT2P19087 354 aa23.35■■□□□ 1.33
SEMA3B-206ENST00000439487 EHD4Q9H223 541 aa23.35■■□□□ 1.33
SEMA3B-206ENST00000439487 SERPINB13Q9UIV8 391 aa23.35■■□□□ 1.33
SEMA3B-206ENST00000439487 PTPRFP10586 1907 aa23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 PATL2C9JE40 543 aaKnown RBP23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 USP17L12C9JPN9 530 aa23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 USP17L21D6R901 530 aa23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 APPP05067 770 aa23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 HSPA1AP0DMV8 641 aaKnown RBP23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 HSPA1BP0DMV9 641 aaKnown RBP23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 MCMDC2Q4G0Z9 681 aa23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.34■■□□□ 1.33
SEMA3B-206ENST00000439487 SMIM22K7EJ46 135 aa23.33■■□□□ 1.33
SEMA3B-206ENST00000439487 CAP2P40123 477 aa23.33■■□□□ 1.33
SEMA3B-206ENST00000439487 CTR9Q6PD62 1173 aa23.33■■□□□ 1.33
SEMA3B-206ENST00000439487 EPB41L4AQ9HCS5 686 aaPredicted RBP23.33■■□□□ 1.33
SEMA3B-206ENST00000439487 PICK1Q9NRD5 415 aa23.33■■□□□ 1.33
SEMA3B-206ENST00000439487 PTPRAP18433 802 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 PPATQ06203 517 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 PPIL2Q13356 520 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 C12orf60Q5U649 245 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 GIMAP6Q6P9H5 292 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 AMOTL1Q8IY63 956 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 REM2Q8IYK8 340 aaPredicted RBP23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 IFNL3Q8IZI9 196 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 DYNLL2Q96FJ2 89 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 DIAPH3Q9NSV4 1193 aa23.32■■□□□ 1.32
SEMA3B-206ENST00000439487 MANSC4A6NHS7 340 aaPredicted RBP23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 IRF6O14896 467 aa23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 GDF11O95390 407 aa23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 TM4SF4P48230 202 aa23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 TDO2P48775 406 aa23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 GABPAQ06546 454 aa23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 SHROOM1Q2M3G4 852 aaPredicted RBP23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 CWC27Q6UX04 472 aaKnown RBP23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 CCDC84Q86UT8 332 aaPredicted RBP23.31■■□□□ 1.32
SEMA3B-206ENST00000439487 HIP1O00291 1037 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 SHMT1P34896 483 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 JAG1P78504 1218 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 SREBF2Q12772 1141 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 SBK1Q52WX2 424 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 VPS53Q5VIR6 699 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 TATDN1Q6P1N9 297 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 ZNF589Q86UQ0 364 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms