RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
SCAF4-203ENST00000434667 C4BP0C0L5 1744 aa11.97□□□□□ -0.49
SCAF4-203ENST00000434667 SMIM22K7EJ46 135 aa11.97□□□□□ -0.49
SCAF4-203ENST00000434667 YEATS4O95619 227 aa11.97□□□□□ -0.49
SCAF4-203ENST00000434667 FOXO4P98177 505 aa11.97□□□□□ -0.49
SCAF4-203ENST00000434667 NCAPH2Q6IBW4 605 aa11.97□□□□□ -0.49
SCAF4-203ENST00000434667 NBPF3Q9H094 633 aa11.97□□□□□ -0.49
SCAF4-203ENST00000434667 MAPK8IP1Q9UQF2 711 aa11.97□□□□□ -0.49
SCAF4-203ENST00000434667 SH3TC1Q8TE82 1336 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 RNF225M0QZC1 329 aaPredicted RBP11.96□□□□□ -0.49
SCAF4-203ENST00000434667 ENC1O14682 589 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 RANBP6O60518 1105 aaKnown RBP11.96□□□□□ -0.49
SCAF4-203ENST00000434667 CHMP4BP1P59074 171 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 RBL2Q08999 1139 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 RSRC2Q7L4I2 434 aaKnown RBP11.96□□□□□ -0.49
SCAF4-203ENST00000434667 NOA1Q8NC60 698 aaKnown RBP11.96□□□□□ -0.49
SCAF4-203ENST00000434667 H0YHG0 523 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 ARHGAP6O43182 974 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 ZSCAN12O43309 604 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 VSNL1P62760 191 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 PTPAQ15257 358 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 IMMTQ16891 758 aaKnown RBP11.96□□□□□ -0.49
SCAF4-203ENST00000434667 TXLNBQ8N3L3 684 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 CENPHQ9H3R5 247 aa11.96□□□□□ -0.49
SCAF4-203ENST00000434667 RRP15Q9Y3B9 282 aaKnown RBP11.96□□□□□ -0.49
SCAF4-203ENST00000434667 METAP2P50579 478 aaKnown RBP eCLIP11.96□□□□□ -0.5
SCAF4-203ENST00000434667 DNA2P51530 1060 aa11.96□□□□□ -0.5
SCAF4-203ENST00000434667 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.5
SCAF4-203ENST00000434667 MB21D2Q8IYB1 491 aaPredicted RBP11.96□□□□□ -0.5
SCAF4-203ENST00000434667 UBXN6Q9BZV1 441 aa11.96□□□□□ -0.5
SCAF4-203ENST00000434667 RASSF4Q9H2L5 321 aa11.96□□□□□ -0.5
SCAF4-203ENST00000434667 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 ZNF213O14771 459 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 GPR161Q8N6U8 529 aaKnown RBP11.95□□□□□ -0.5
SCAF4-203ENST00000434667 BPIFA3Q9BQP9 254 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCAF4-203ENST00000434667 HELLSQ9NRZ9 838 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 HDAC6Q9UBN7 1215 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 TUBE1Q9UJT0 475 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 HDAC5Q9UQL6 1122 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 GPAA1O43292 621 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 SRGAP2O75044 1071 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 TTC39AQ5SRH9 613 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 CCDC102BQ68D86 513 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 GOLGA1Q92805 767 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 TNS2Q63HR2 1409 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 IKBKBO14920 756 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 IDH1O75874 414 aaKnown RBP11.95□□□□□ -0.5
SCAF4-203ENST00000434667 SPECC1LQ69YQ0 1117 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 TTC19Q6DKK2 380 aaPredicted RBP11.95□□□□□ -0.5
SCAF4-203ENST00000434667 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 SLC35F6Q8N357 371 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 PCMTD1Q96MG8 357 aaPredicted RBP11.95□□□□□ -0.5
SCAF4-203ENST00000434667 PCDHB6Q9Y5E3 794 aa11.95□□□□□ -0.5
SCAF4-203ENST00000434667 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
SCAF4-203ENST00000434667 TAF7LQ5H9L4 462 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 C19orf44Q9H6X5 657 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 CSB-PGBD3P0DP91 1061 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
SCAF4-203ENST00000434667 TXLNAP40222 546 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 NBPF14Q5TI25 921 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 NBPF10Q6P3W6 841 aaKnown RBP11.94□□□□□ -0.5
SCAF4-203ENST00000434667 NBPF15Q8N660 670 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 HELBQ8NG08 1087 aaPredicted RBP11.94□□□□□ -0.5
SCAF4-203ENST00000434667 XAGE2Q96GT9 111 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 MAP3K14Q99558 947 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 EHD4Q9H223 541 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 CASP14P31944 242 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 FAM89AQ96GI7 184 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 CAPZA3Q96KX2 299 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 SLC52A2Q9HAB3 445 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 HPSEQ9Y251 543 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 MEGF6O75095 1541 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 AKAP11Q9UKA4 1901 aa11.94□□□□□ -0.5
SCAF4-203ENST00000434667 NRAPQ86VF7 1730 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 LRRIQ3A6PVS8 624 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 CBFA2T2O43439 604 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 CUTAO60888 179 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 DHX8Q14562 1220 aaKnown RBP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 SART3Q15020 963 aaKnown RBP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 DNAJC21Q5F1R6 531 aaKnown RBP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 NCOA7Q8NI08 942 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 EPSTI1Q96J88 318 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 MPHOSPH8Q99549 860 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 MYH3P11055 1940 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 TOB1P50616 345 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 FXR1P51114 621 aaKnown RBP eCLIP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 CASP7P55210 303 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 AMOTQ4VCS5 1084 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 BEND6Q5SZJ8 279 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 JAKMIP3Q5VZ66 844 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 SRLQ86TD4 932 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 AKAP2Q9Y2D5 859 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 A0A087X0B3 334 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 WNT7AO00755 349 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms