RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 DIS3L2Q8IYB7 885 aaKnown RBP28.67■■■□□ 2.18
LMBR1-209ENST00000434453 ACSBG1Q96GR2 724 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 TOMM22Q9NS69 142 aa28.67■■■□□ 2.18
LMBR1-209ENST00000434453 GRIN1Q05586 938 aa28.66■■■□□ 2.18
LMBR1-209ENST00000434453 WASF1Q92558 559 aa28.66■■■□□ 2.18
LMBR1-209ENST00000434453 LRP2BPQ9P2M1 347 aa28.66■■■□□ 2.18
LMBR1-209ENST00000434453 IQSEC3Q9UPP2 1182 aaPredicted RBP28.66■■■□□ 2.18
LMBR1-209ENST00000434453 MDM2Q00987 491 aaPredicted RBP28.66■■■□□ 2.18
LMBR1-209ENST00000434453 SPECC1Q5M775 1068 aa28.66■■■□□ 2.18
LMBR1-209ENST00000434453 CRACR2BQ8N4Y2 399 aaPredicted RBP28.66■■■□□ 2.18
LMBR1-209ENST00000434453 KRI1Q8N9T8 703 aaKnown RBP28.66■■■□□ 2.18
LMBR1-209ENST00000434453 WTIPA6NIX2 430 aaPredicted RBP28.65■■■□□ 2.18
LMBR1-209ENST00000434453 FOXN1O15353 648 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 BMP6P22004 513 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 TPM4P67936 248 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 CCDC82Q8N4S0 544 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 CCDC150Q8NCX0 1101 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 CICQ96RK0 1608 aaPredicted RBP28.65■■■□□ 2.18
LMBR1-209ENST00000434453 CACNA1SQ13698 1873 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 BAZ2AQ9UIF9 1905 aaKnown RBP28.65■■■□□ 2.18
LMBR1-209ENST00000434453 PPARAQ07869 468 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 DPF2Q92785 391 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 MTA3Q9BTC8 594 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 PCDHA5Q9Y5H7 936 aa28.65■■■□□ 2.18
LMBR1-209ENST00000434453 COL1A1P02452 1464 aaPredicted RBP28.65■■■□□ 2.18
LMBR1-209ENST00000434453 ROBO1Q9Y6N7 1651 aa28.64■■■□□ 2.18
LMBR1-209ENST00000434453 CASZ1Q86V15 1759 aa28.64■■■□□ 2.18
LMBR1-209ENST00000434453 A0A0G2JS52 829 aa28.64■■■□□ 2.18
LMBR1-209ENST00000434453 ZNF804BA4D1E1 1349 aa28.64■■■□□ 2.18
LMBR1-209ENST00000434453 SART3Q15020 963 aaKnown RBP28.64■■■□□ 2.18
LMBR1-209ENST00000434453 CYP7A1P22680 504 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 MYL5Q02045 173 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 TRIM22Q8IYM9 498 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 ZNF654Q8IZM8 581 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 SDR42E1Q8WUS8 393 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 ZMYND15Q9H091 742 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 FOXP1Q9H334 677 aaPredicted RBP28.63■■■□□ 2.17
LMBR1-209ENST00000434453 FBXO2Q9UK22 296 aaPredicted RBP28.63■■■□□ 2.17
LMBR1-209ENST00000434453 NR5A1Q13285 461 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 FANCBQ8NB91 859 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 CNNM3Q8NE01 707 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 SHISA4Q96DD7 197 aa28.63■■■□□ 2.17
LMBR1-209ENST00000434453 PTPREP23469 700 aa28.62■■■□□ 2.17
LMBR1-209ENST00000434453 SEC23AQ15436 765 aa28.62■■■□□ 2.17
LMBR1-209ENST00000434453 MARCH10Q8NA82 808 aaPredicted RBP28.62■■■□□ 2.17
LMBR1-209ENST00000434453 DEXIO95424 95 aa28.62■■■□□ 2.17
LMBR1-209ENST00000434453 SFPQP23246 707 aaKnown RBP eCLIP28.62■■■□□ 2.17
LMBR1-209ENST00000434453 PDE4BQ07343 736 aa28.62■■■□□ 2.17
LMBR1-209ENST00000434453 DDB1Q16531 1140 aa28.62■■■□□ 2.17
LMBR1-209ENST00000434453 OXER1Q8TDS5 423 aa28.62■■■□□ 2.17
LMBR1-209ENST00000434453 SPATA31A1Q5TZJ5 1347 aa28.61■■■□□ 2.17
LMBR1-209ENST00000434453 RCAN1P53805 252 aa28.61■■■□□ 2.17
LMBR1-209ENST00000434453 SAFBQ15424 915 aaKnown RBP eCLIP28.61■■■□□ 2.17
LMBR1-209ENST00000434453 TMTC2Q8N394 836 aa28.61■■■□□ 2.17
LMBR1-209ENST00000434453 RNF41Q9H4P4 317 aaPredicted RBP28.61■■■□□ 2.17
LMBR1-209ENST00000434453 PCDHB6Q9Y5E3 794 aa28.61■■■□□ 2.17
LMBR1-209ENST00000434453 NRAPQ86VF7 1730 aa28.61■■■□□ 2.17
LMBR1-209ENST00000434453 C3orf67Q6ZVT6 689 aa28.61■■■□□ 2.17
LMBR1-209ENST00000434453 ELOA2Q8IYF1 753 aaPredicted RBP28.61■■■□□ 2.17
LMBR1-209ENST00000434453 ANAPC4Q9UJX5 808 aa28.61■■■□□ 2.17
LMBR1-209ENST00000434453 ERICH2A1L162 156 aa28.6■■■□□ 2.17
LMBR1-209ENST00000434453 GYG1P46976 350 aa28.6■■■□□ 2.17
LMBR1-209ENST00000434453 NUP133Q8WUM0 1156 aa28.6■■■□□ 2.17
LMBR1-209ENST00000434453 KCNJ6P48051 423 aa28.59■■■□□ 2.17
LMBR1-209ENST00000434453 RILPL1Q5EBL4 403 aa28.59■■■□□ 2.17
LMBR1-209ENST00000434453 PPP1R13BQ96KQ4 1090 aa28.59■■■□□ 2.17
LMBR1-209ENST00000434453 MINDY4BA8MYZ0 360 aa28.59■■■□□ 2.17
LMBR1-209ENST00000434453 UBASH3AP57075 661 aa28.59■■■□□ 2.17
LMBR1-209ENST00000434453 RIOK1Q9BRS2 568 aaKnown RBP28.59■■■□□ 2.17
LMBR1-209ENST00000434453 CDCA7Q9BWT1 371 aaPredicted RBP28.59■■■□□ 2.17
LMBR1-209ENST00000434453 ABCF2Q9UG63 623 aa28.59■■■□□ 2.17
LMBR1-209ENST00000434453 CCDC196A0A1B0GTZ2 297 aa28.58■■■□□ 2.17
LMBR1-209ENST00000434453 FANCLQ9NW38 375 aa28.58■■■□□ 2.17
LMBR1-209ENST00000434453 AHDC1Q5TGY3 1603 aaPredicted RBP28.58■■■□□ 2.17
LMBR1-209ENST00000434453 TNKSO95271 1327 aa28.58■■■□□ 2.17
LMBR1-209ENST00000434453 UBAC1Q9BSL1 405 aa28.58■■■□□ 2.17
LMBR1-209ENST00000434453 COL5A3P25940 1745 aaPredicted RBP28.58■■■□□ 2.17
LMBR1-209ENST00000434453 MAGEB6P1A0A0J9YX57 407 aa28.57■■■□□ 2.16
LMBR1-209ENST00000434453 ZNF215Q9UL58 517 aaPredicted RBP28.57■■■□□ 2.16
LMBR1-209ENST00000434453 DUOX1Q9NRD9 1551 aa28.57■■■□□ 2.16
LMBR1-209ENST00000434453 PSDA5PKW4 1024 aaPredicted RBP28.57■■■□□ 2.16
LMBR1-209ENST00000434453 PRR29P0C7W0 189 aa28.57■■■□□ 2.16
LMBR1-209ENST00000434453 ZNF384Q8TF68 577 aa28.57■■■□□ 2.16
LMBR1-209ENST00000434453 INTS13Q9NVM9 706 aa28.57■■■□□ 2.16
LMBR1-209ENST00000434453 MAN1B1Q9UKM7 699 aa28.57■■■□□ 2.16
LMBR1-209ENST00000434453 SCN7AQ01118 1682 aa28.56■■■□□ 2.16
LMBR1-209ENST00000434453 KIF18AQ8NI77 898 aa28.56■■■□□ 2.16
LMBR1-209ENST00000434453 CDC5LQ99459 802 aaKnown RBP28.56■■■□□ 2.16
LMBR1-209ENST00000434453 RAI14Q9P0K7 980 aa28.56■■■□□ 2.16
LMBR1-209ENST00000434453 TMEM232C9JQI7 657 aa28.55■■■□□ 2.16
LMBR1-209ENST00000434453 POLR2DO15514 142 aaKnown RBP28.55■■■□□ 2.16
LMBR1-209ENST00000434453 SERPINC1P01008 464 aa28.55■■■□□ 2.16
LMBR1-209ENST00000434453 POSTNQ15063 836 aa28.55■■■□□ 2.16
LMBR1-209ENST00000434453 NT5DC1Q5TFE4 455 aa28.55■■■□□ 2.16
LMBR1-209ENST00000434453 OLFM4Q6UX06 510 aa28.55■■■□□ 2.16
LMBR1-209ENST00000434453 ENAHQ8N8S7 591 aaPredicted RBP28.55■■■□□ 2.16
LMBR1-209ENST00000434453 BCL11BQ9C0K0 894 aaPredicted RBP28.55■■■□□ 2.16
LMBR1-209ENST00000434453 SARSP49591 514 aaKnown RBP28.55■■■□□ 2.16
LMBR1-209ENST00000434453 CBX1P83916 185 aa28.55■■■□□ 2.16
LMBR1-209ENST00000434453 FUT2Q10981 343 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms