RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 MMP1P03956 469 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 SIK1P57059 783 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 OXER1Q8TDS5 423 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 CYP2D7A0A087X1C5 515 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 KCNQ4P56696 695 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 GRAMD1CQ8IYS0 662 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 KRI1Q8N9T8 703 aaKnown RBP21.31■■□□□ 1
CHD1L-204ENST00000431239 STAG1Q8WVM7 1258 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 UBAC1Q9BSL1 405 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 TUBE1Q9UJT0 475 aa21.31■■□□□ 1
CHD1L-204ENST00000431239 CUTAO60888 179 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 PRDM1O75626 825 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 DDB1Q16531 1140 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 ZNF827Q17R98 1081 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 CFAP100Q494V2 611 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 E4F1Q66K89 784 aaPredicted RBP21.3■■□□□ 1
CHD1L-204ENST00000431239 KRBA2Q6ZNG9 492 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 SMIM5Q71RC9 77 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 TIGD1Q96MW7 591 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 PCDHB6Q9Y5E3 794 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 COL4A1P02462 1669 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 NTSR2O95665 410 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 PPARAQ07869 468 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 IMPACTQ9P2X3 320 aa21.3■■□□□ 1
CHD1L-204ENST00000431239 UBASH3AP57075 661 aa21.29■■□□□ 1
CHD1L-204ENST00000431239 MYL5Q02045 173 aa21.29■■□□□ 1
CHD1L-204ENST00000431239 ZNF654Q8IZM8 581 aa21.29■■□□□ 1
CHD1L-204ENST00000431239 ZNF215Q9UL58 517 aaPredicted RBP21.29■■□□□ 1
CHD1L-204ENST00000431239 PDE4BQ07343 736 aa21.29■■□□□ 1
CHD1L-204ENST00000431239 BICDL1Q6ZP65 573 aa21.29■■□□□ 1
CHD1L-204ENST00000431239 FANCLQ9NW38 375 aa21.29■■□□□ 1
CHD1L-204ENST00000431239 STK36Q9NRP7 1315 aa21.29■■□□□ 1
CHD1L-204ENST00000431239 ARAP2Q8WZ64 1704 aa21.29■■□□□ 1
CHD1L-204ENST00000431239 POLR2DO15514 142 aaKnown RBP21.28■■□□□ 1
CHD1L-204ENST00000431239 C3orf67Q6ZVT6 689 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 DOCK2Q92608 1830 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 FAM205CA6NFA0 338 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 TMEM232C9JQI7 657 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 BMP6P22004 513 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 OLFM4Q6UX06 510 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 CCDC150Q8NCX0 1101 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 WASF1Q92558 559 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 AK7Q96M32 723 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.28■■□□□ 1
CHD1L-204ENST00000431239 NPHP1O15259 732 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 PRR29P0C7W0 189 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 GNAT2P19087 354 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 FANCBQ8NB91 859 aa21.28■■□□□ 1
CHD1L-204ENST00000431239 TNKSO95271 1327 aa21.27■■□□□ 1
CHD1L-204ENST00000431239 IKBKBO14920 756 aa21.27■■□□□ 1
CHD1L-204ENST00000431239 DYNLL1P63167 89 aaKnown RBP21.27■■□□□ 1
CHD1L-204ENST00000431239 USP49Q70CQ1 688 aa21.27■■□□□ 1
CHD1L-204ENST00000431239 CRACR2BQ8N4Y2 399 aaPredicted RBP21.27■■□□□ 1
CHD1L-204ENST00000431239 PPP1R13BQ96KQ4 1090 aa21.27■■□□□ 1
CHD1L-204ENST00000431239 CABP5Q9NP86 173 aa21.27■■□□□ 1
CHD1L-204ENST00000431239 PNPLA7Q6ZV29 1317 aa21.27■■□□□ 1
CHD1L-204ENST00000431239 TAF1P21675 1872 aa21.26■□□□□ 0.99
CHD1L-204ENST00000431239 PARP10Q53GL7 1025 aa21.26■□□□□ 0.99
CHD1L-204ENST00000431239 TRMT44Q8IYL2 757 aaKnown RBP21.26■□□□□ 0.99
CHD1L-204ENST00000431239 VPS54Q9P1Q0 977 aa21.26■□□□□ 0.99
CHD1L-204ENST00000431239 MYH14Q7Z406 1995 aaKnown RBP21.26■□□□□ 0.99
CHD1L-204ENST00000431239 MAGEB6P1A0A0J9YX57 407 aa21.26■□□□□ 0.99
CHD1L-204ENST00000431239 KIF18AQ8NI77 898 aa21.26■□□□□ 0.99
CHD1L-204ENST00000431239 SERTAD1Q9UHV2 236 aa21.26■□□□□ 0.99
CHD1L-204ENST00000431239 BAZ2BQ9UIF8 2168 aaKnown RBP21.25■□□□□ 0.99
CHD1L-204ENST00000431239 DEXIO95424 95 aa21.25■□□□□ 0.99
CHD1L-204ENST00000431239 EVX2Q03828 476 aa21.25■□□□□ 0.99
CHD1L-204ENST00000431239 MARCH10Q8NA82 808 aaPredicted RBP21.25■□□□□ 0.99
CHD1L-204ENST00000431239 FBXO2Q9UK22 296 aaPredicted RBP21.25■□□□□ 0.99
CHD1L-204ENST00000431239 COL14A1Q05707 1796 aaKnown RBP21.25■□□□□ 0.99
CHD1L-204ENST00000431239 KCNQ2O43526 872 aa21.25■□□□□ 0.99
CHD1L-204ENST00000431239 ERFEQ4G0M1 354 aa21.25■□□□□ 0.99
CHD1L-204ENST00000431239 SYT10Q6XYQ8 523 aa21.25■□□□□ 0.99
CHD1L-204ENST00000431239 RNF41Q9H4P4 317 aaPredicted RBP21.25■□□□□ 0.99
CHD1L-204ENST00000431239 SHISA4Q96DD7 197 aa21.24■□□□□ 0.99
CHD1L-204ENST00000431239 POSTNQ15063 836 aa21.24■□□□□ 0.99
CHD1L-204ENST00000431239 SLC4A8Q2Y0W8 1093 aa21.24■□□□□ 0.99
CHD1L-204ENST00000431239 TIAM2Q8IVF5 1701 aa21.24■□□□□ 0.99
CHD1L-204ENST00000431239 FAM237AA0A1B0GTK4 181 aa21.23■□□□□ 0.99
CHD1L-204ENST00000431239 RILPL1Q5EBL4 403 aa21.23■□□□□ 0.99
CHD1L-204ENST00000431239 MAN1B1Q9UKM7 699 aa21.23■□□□□ 0.99
CHD1L-204ENST00000431239 COL1A1P02452 1464 aaPredicted RBP21.23■□□□□ 0.99
CHD1L-204ENST00000431239 CCDC196A0A1B0GTZ2 297 aa21.23■□□□□ 0.99
CHD1L-204ENST00000431239 AKAP17AQ02040 695 aaKnown RBP21.23■□□□□ 0.99
CHD1L-204ENST00000431239 HOMER1Q86YM7 354 aa21.23■□□□□ 0.99
CHD1L-204ENST00000431239 ESR2Q92731 530 aa21.23■□□□□ 0.99
CHD1L-204ENST00000431239 FOXP1Q9H334 677 aaPredicted RBP21.23■□□□□ 0.99
CHD1L-204ENST00000431239 BAZ2AQ9UIF9 1905 aaKnown RBP21.23■□□□□ 0.99
CHD1L-204ENST00000431239 MYH2Q9UKX2 1941 aa21.23■□□□□ 0.99
CHD1L-204ENST00000431239 NRDCO43847 1150 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 PLEKHA8P1O95397 391 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 PTPREP23469 700 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 FMR1Q06787 632 aaKnown RBP eCLIP21.22■□□□□ 0.993e-7■■■□□ 16.3
CHD1L-204ENST00000431239 EARS2Q5JPH6 523 aaKnown RBP21.22■□□□□ 0.99
CHD1L-204ENST00000431239 ANKRD18AQ8IVF6 992 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 CCDC24Q8N4L8 307 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 ENAHQ8N8S7 591 aaPredicted RBP21.22■□□□□ 0.99
CHD1L-204ENST00000431239 CDC5LQ99459 802 aaKnown RBP21.22■□□□□ 0.99
CHD1L-204ENST00000431239 CSRNP2Q9H175 543 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 JAG2Q9Y219 1238 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms