RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 RABL6Q3YEC7 729 aaPredicted RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 PAPD7Q5XG87 772 aaKnown RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 JMYQ8N9B5 988 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 SGSM3Q96HU1 749 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 ACBD3Q9H3P7 528 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 EIF3HO15372 352 aaKnown RBP eCLIP5.85□□□□□ -1.472e-6■■■□□ 15.4
RIF1-203ENST00000428287 PDIA3P30101 505 aaKnown RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 MLECQ14165 292 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 DSCC1Q9BVC3 393 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 ARID1BQ8NFD5 2236 aaPredicted RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 FOCADQ5VW36 1801 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 C6orf89Q6UWU4 347 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 B4GALNT4Q76KP1 1039 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 EIF1ADQ8N9N8 165 aaKnown RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 ANKRD24Q8TF21 1146 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 NFE2L3Q9Y4A8 694 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 PTPDC1A2A3K4 754 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 H3BQV1 296 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 ERCC3P19447 782 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 CDC27P30260 824 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 IFFO2Q5TF58 517 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 ZNF579Q8NAF0 562 aaKnown RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 EYA1Q99502 592 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 PRLRP16471 622 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 SART3Q15020 963 aaKnown RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 RAD9BQ6WBX8 426 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 METTL16Q86W50 562 aaKnown RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 MAB21L3Q8N8X9 362 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 HAUS7Q99871 368 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 DBF4Q9UBU7 674 aaPredicted RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 DICER1Q9UPY3 1922 aaKnown RBP5.85□□□□□ -1.47
RIF1-203ENST00000428287 GNAT3A8MTJ3 354 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 RNF40O75150 1001 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 Q6ZUG5 572 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 P3H4Q92791 437 aa5.85□□□□□ -1.47
RIF1-203ENST00000428287 MEFVO15553 781 aaPredicted RBP5.84□□□□□ -1.47
RIF1-203ENST00000428287 SYKP43405 635 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 NMIQ13287 307 aaPredicted RBP5.84□□□□□ -1.47
RIF1-203ENST00000428287 NBPF20Q3BBV1 942 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 CLIC6Q96NY7 704 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 MYO9BQ13459 2157 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 TRPM3Q9HCF6 1732 aaPredicted RBP5.84□□□□□ -1.47
RIF1-203ENST00000428287 KLHL33A6NCF5 533 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 MAP2K1Q02750 393 aaPredicted RBP5.84□□□□□ -1.47
RIF1-203ENST00000428287 TTLL5Q6EMB2 1281 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 DBNLQ9UJU6 430 aaKnown RBP5.84□□□□□ -1.47
RIF1-203ENST00000428287 PPFIA1Q13136 1202 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 SEMA3FQ13275 785 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 DRP2Q13474 957 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 ANO1Q5XXA6 986 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 GNL3LQ9NVN8 582 aaKnown RBP5.84□□□□□ -1.47
RIF1-203ENST00000428287 USP14P54578 494 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 SHC4Q6S5L8 630 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 VPS37DQ86XT2 251 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 BCAS4Q8TDM0 211 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 TEX13AQ9BXU3 409 aaPredicted RBP5.84□□□□□ -1.47
RIF1-203ENST00000428287 MIS18AQ9NYP9 233 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 SLX4Q8IY92 1834 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 ALPK2Q86TB3 2170 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 GYPCP04921 128 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 PFKFB1P16118 471 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 SLC8A3P57103 927 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 MCMDC2Q4G0Z9 681 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 TAX1BP1Q86VP1 789 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 TMTC1Q8IUR5 882 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 COL18A1P39060 1754 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 DIP2BQ9P265 1576 aa5.84□□□□□ -1.47
RIF1-203ENST00000428287 PSMD14O00487 310 aa5.84□□□□□ -1.48
RIF1-203ENST00000428287 EIF4A1P60842 406 aaKnown RBP5.84□□□□□ -1.48
RIF1-203ENST00000428287 RESP18Q5W5W9 173 aa5.84□□□□□ -1.48
RIF1-203ENST00000428287 WWC2Q6AWC2 1192 aa5.84□□□□□ -1.48
RIF1-203ENST00000428287 CNGA4Q8IV77 575 aa5.84□□□□□ -1.48
RIF1-203ENST00000428287 ZNF483Q8TF39 744 aaPredicted RBP5.84□□□□□ -1.48
RIF1-203ENST00000428287 FMNL2Q96PY5 1086 aa5.84□□□□□ -1.48
RIF1-203ENST00000428287 BICC1Q9H694 974 aaKnown RBP5.84□□□□□ -1.48
RIF1-203ENST00000428287 FAM184BQ9ULE4 1060 aa5.84□□□□□ -1.48
RIF1-203ENST00000428287 TTF2Q9UNY4 1162 aaKnown RBP5.84□□□□□ -1.48
RIF1-203ENST00000428287 GLI3P10071 1580 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 TMCO5BA8MYB1 307 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 KIF3CO14782 793 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 FOXO3O43524 673 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 MNAT1P51948 309 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 MTF1Q14872 753 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 IGSF22Q8N9C0 903 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 LRP6O75581 1613 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 TP53BP1Q12888 1972 aaPredicted RBP5.83□□□□□ -1.48
RIF1-203ENST00000428287 TMEM232C9JQI7 657 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 EMBQ6PCB8 327 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 CCNI2Q6ZMN8 369 aaPredicted RBP5.83□□□□□ -1.48
RIF1-203ENST00000428287 HPCAL4Q9UM19 191 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 ARID1AO14497 2285 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 KIF5CO60282 957 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 SLMAPQ14BN4 828 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 HSP90AB3PQ58FF7 597 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 CCDC12Q8WUD4 166 aaPredicted RBP5.83□□□□□ -1.48
RIF1-203ENST00000428287 PHAXQ9H814 394 aaKnown RBP5.83□□□□□ -1.48
RIF1-203ENST00000428287 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.83□□□□□ -1.48
RIF1-203ENST00000428287 MROH7-TTC4A0A0A0MT08 1334 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 CKAP5Q14008 2032 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 PTPREP23469 700 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms