RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CDK5RAP2Q96SN8 1893 aa15.52■□□□□ 0.07
GPC1-204ENST00000426280 ZNF532Q9HCE3 1301 aa15.51■□□□□ 0.07
GPC1-204ENST00000426280 CETPP11597 493 aa15.51■□□□□ 0.07
GPC1-204ENST00000426280 SNAPC2Q13487 334 aa15.51■□□□□ 0.07
GPC1-204ENST00000426280 CD99L2Q8TCZ2 262 aa15.51■□□□□ 0.07
GPC1-204ENST00000426280 AFG3L2Q9Y4W6 797 aa15.51■□□□□ 0.07
GPC1-204ENST00000426280 SMIM22K7EJ46 135 aa15.5■□□□□ 0.07
GPC1-204ENST00000426280 CTNND1O60716 968 aaKnown RBP15.5■□□□□ 0.07
GPC1-204ENST00000426280 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
GPC1-204ENST00000426280 MAP3K12Q12852 859 aa15.5■□□□□ 0.07
GPC1-204ENST00000426280 TAF1CQ15572 869 aaPredicted RBP15.5■□□□□ 0.07
GPC1-204ENST00000426280 SLC9C2Q5TAH2 1124 aa15.5■□□□□ 0.07
GPC1-204ENST00000426280 HAUS7Q99871 368 aa15.5■□□□□ 0.07
GPC1-204ENST00000426280 NOL10Q9BSC4 688 aaKnown RBP15.5■□□□□ 0.07
GPC1-204ENST00000426280 PAG1Q9NWQ8 432 aa15.5■□□□□ 0.07
GPC1-204ENST00000426280 COL2A1P02458 1487 aaPredicted RBP15.49■□□□□ 0.07
GPC1-204ENST00000426280 PRKAB2O43741 272 aa15.49■□□□□ 0.07
GPC1-204ENST00000426280 ECM2O94769 699 aaPredicted RBP15.49■□□□□ 0.07
GPC1-204ENST00000426280 CTGFP29279 349 aa15.49■□□□□ 0.07
GPC1-204ENST00000426280 CAP2P40123 477 aa15.49■□□□□ 0.07
GPC1-204ENST00000426280 OTUD7BQ6GQQ9 843 aa15.49■□□□□ 0.07
GPC1-204ENST00000426280 METTL16Q86W50 562 aaKnown RBP15.49■□□□□ 0.07
GPC1-204ENST00000426280 LCORLQ8N3X6 602 aa15.49■□□□□ 0.07
GPC1-204ENST00000426280 ARHGAP39Q9C0H5 1083 aa15.49■□□□□ 0.07
GPC1-204ENST00000426280 PI4KBQ9UBF8 816 aa15.49■□□□□ 0.07
GPC1-204ENST00000426280 PHIPQ8WWQ0 1821 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 PDHXO00330 501 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 CYP2C8P10632 490 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 PLCG2P16885 1265 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 SP3Q02447 781 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 OTOP1Q7RTM1 612 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 ANKRD23Q86SG2 305 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 ARMT1Q9H993 441 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 ZFYVE28Q9HCC9 887 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 CPA4Q9UI42 421 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 HPS5Q9UPZ3 1129 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 TRIM17Q9Y577 477 aa15.48■□□□□ 0.07
GPC1-204ENST00000426280 ZSWIM8A7E2V4 1837 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 ADGRA2Q96PE1 1338 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 A0A0G2JLL6 359 aaPredicted RBP15.47■□□□□ 0.07
GPC1-204ENST00000426280 MAGEB6P1A0A0J9YX57 407 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 TRIM75PA6NK02 468 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 CXCL11O14625 94 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 IGSF3O75054 1194 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 ADD2P35612 726 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 USP5P45974 858 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 PLCD1P51178 756 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 TTF1Q15361 905 aaPredicted RBP15.47■□□□□ 0.07
GPC1-204ENST00000426280 PRRT2Q7Z6L0 340 aaPredicted RBP15.47■□□□□ 0.07
GPC1-204ENST00000426280 FOXP4Q8IVH2 680 aaPredicted RBP15.47■□□□□ 0.07
GPC1-204ENST00000426280 EXOC6Q8TAG9 804 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 SDR42E1Q8WUS8 393 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 DHX36Q9H2U1 1008 aaKnown RBP15.47■□□□□ 0.07
GPC1-204ENST00000426280 PICK1Q9NRD5 415 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 FOCADQ5VW36 1801 aa15.47■□□□□ 0.07
GPC1-204ENST00000426280 TLR2O60603 784 aa15.46■□□□□ 0.07
GPC1-204ENST00000426280 GDF11O95390 407 aa15.46■□□□□ 0.07
GPC1-204ENST00000426280 CYP2D6P10635 497 aa15.46■□□□□ 0.07
GPC1-204ENST00000426280 SPP2Q13103 211 aa15.46■□□□□ 0.07
GPC1-204ENST00000426280 TREML2Q5T2D2 321 aa15.46■□□□□ 0.07
GPC1-204ENST00000426280 C17orf99Q6UX52 265 aa15.46■□□□□ 0.07
GPC1-204ENST00000426280 ECHDC1Q9NTX5 307 aa15.46■□□□□ 0.07
GPC1-204ENST00000426280 DOCK1Q14185 1865 aa15.46■□□□□ 0.06
GPC1-204ENST00000426280 GADL1Q6ZQY3 521 aa15.45■□□□□ 0.06
GPC1-204ENST00000426280 HERC5Q9UII4 1024 aaKnown RBP15.45■□□□□ 0.06
GPC1-204ENST00000426280 CYP2D7A0A087X1C5 515 aa15.44■□□□□ 0.06
GPC1-204ENST00000426280 MBD4O95243 580 aa15.44■□□□□ 0.06
GPC1-204ENST00000426280 SOX10P56693 466 aa15.44■□□□□ 0.06
GPC1-204ENST00000426280 FBXO46Q6PJ61 603 aaPredicted RBP15.44■□□□□ 0.06
GPC1-204ENST00000426280 PUS7LQ9H0K6 701 aaKnown RBP15.44■□□□□ 0.06
GPC1-204ENST00000426280 ZCCHC17Q9NP64 241 aaKnown RBP15.44■□□□□ 0.06
GPC1-204ENST00000426280 PTPN22Q9Y2R2 807 aa15.44■□□□□ 0.06
GPC1-204ENST00000426280 SALL3Q9BXA9 1300 aa15.43■□□□□ 0.06
GPC1-204ENST00000426280 IGHDP01880 384 aa15.43■□□□□ 0.06
GPC1-204ENST00000426280 SHMT1P34896 483 aa15.43■□□□□ 0.06
GPC1-204ENST00000426280 TATDN1Q6P1N9 297 aa15.43■□□□□ 0.06
GPC1-204ENST00000426280 CRACR2BQ8N4Y2 399 aaPredicted RBP15.43■□□□□ 0.06
GPC1-204ENST00000426280 PI4K2BQ8TCG2 481 aa15.43■□□□□ 0.06
GPC1-204ENST00000426280 DYNLL2Q96FJ2 89 aa15.43■□□□□ 0.06
GPC1-204ENST00000426280 ERO1AQ96HE7 468 aa15.43■□□□□ 0.06
GPC1-204ENST00000426280 DCP1AQ9NPI6 582 aaPredicted RBP15.43■□□□□ 0.06
GPC1-204ENST00000426280 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 PEX10O60683 326 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 BCRP11274 1271 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 GUCY1A2P33402 732 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 HMGCS2P54868 508 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 GABPAQ06546 454 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 PKN2Q16513 984 aaKnown RBP15.42■□□□□ 0.06
GPC1-204ENST00000426280 SLC44A5Q8NCS7 719 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 ZNF280CQ8ND82 737 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 EFCC1Q9HA90 598 aa15.42■□□□□ 0.06
GPC1-204ENST00000426280 PTPRFP10586 1907 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 MYH1P12882 1939 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 ATAD5Q96QE3 1844 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 GH2P01242 217 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 RGS19P49795 217 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 LACTBP83111 547 aaPredicted RBP15.41■□□□□ 0.06
GPC1-204ENST00000426280 UBE3CQ15386 1083 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 ANKRD45Q5TZF3 282 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 POTEEQ6S8J3 1075 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms