RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 MTMR10Q9NXD2 777 aa16.86■□□□□ 0.29
VEGFB-202ENST00000426086 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
VEGFB-202ENST00000426086 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
VEGFB-202ENST00000426086 PFASO15067 1338 aa16.86■□□□□ 0.29
VEGFB-202ENST00000426086 RPTORQ8N122 1335 aa16.86■□□□□ 0.29
VEGFB-202ENST00000426086 ATAD5Q96QE3 1844 aa16.86■□□□□ 0.29
VEGFB-202ENST00000426086 GPR75-ASB3A0A0A6YYF3 556 aa16.85■□□□□ 0.29
VEGFB-202ENST00000426086 ZBTB22O15209 634 aa16.85■□□□□ 0.29
VEGFB-202ENST00000426086 TBC1D12O60347 775 aa16.85■□□□□ 0.29
VEGFB-202ENST00000426086 MECOMQ03112 1051 aa16.85■□□□□ 0.29
VEGFB-202ENST00000426086 C11orf49Q9H6J7 331 aa16.85■□□□□ 0.29
VEGFB-202ENST00000426086 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.85■□□□□ 0.29
VEGFB-202ENST00000426086 HMX1Q9NP08 348 aaPredicted RBP16.85■□□□□ 0.29
VEGFB-202ENST00000426086 OGDHLQ9ULD0 1010 aa16.85■□□□□ 0.29
VEGFB-202ENST00000426086 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
VEGFB-202ENST00000426086 JAG1P78504 1218 aa16.84■□□□□ 0.29
VEGFB-202ENST00000426086 LRIT3Q3SXY7 679 aa16.84■□□□□ 0.29
VEGFB-202ENST00000426086 GPR153Q6NV75 609 aa16.84■□□□□ 0.29
VEGFB-202ENST00000426086 PI16Q6UXB8 463 aa16.84■□□□□ 0.29
VEGFB-202ENST00000426086 ZGPATQ8N5A5 531 aaKnown RBP16.84■□□□□ 0.29
VEGFB-202ENST00000426086 ZNF280CQ8ND82 737 aa16.84■□□□□ 0.29
VEGFB-202ENST00000426086 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
VEGFB-202ENST00000426086 PNMA3Q9UL41 463 aa16.84■□□□□ 0.29
VEGFB-202ENST00000426086 COL6A3P12111 3177 aa16.84■□□□□ 0.29
VEGFB-202ENST00000426086 SIPA1L1O43166 1804 aa16.83■□□□□ 0.28
VEGFB-202ENST00000426086 UBTFL1P0CB47 393 aaPredicted RBP16.83■□□□□ 0.28
VEGFB-202ENST00000426086 CYP2B6P20813 491 aa16.83■□□□□ 0.28
VEGFB-202ENST00000426086 CAP2P40123 477 aa16.83■□□□□ 0.28
VEGFB-202ENST00000426086 GCLCP48506 637 aaPredicted RBP16.83■□□□□ 0.28
VEGFB-202ENST00000426086 SHROOM1Q2M3G4 852 aaPredicted RBP16.83■□□□□ 0.28
VEGFB-202ENST00000426086 MAP3K21Q5TCX8 1036 aa16.83■□□□□ 0.28
VEGFB-202ENST00000426086 TDHQ8IZJ6 230 aa16.83■□□□□ 0.28
VEGFB-202ENST00000426086 TXNRD2Q9NNW7 524 aa16.83■□□□□ 0.28
VEGFB-202ENST00000426086 STXBP5LQ9Y2K9 1186 aa16.83■□□□□ 0.28
VEGFB-202ENST00000426086 PDS5AQ29RF7 1337 aaKnown RBP16.82■□□□□ 0.28
VEGFB-202ENST00000426086 SH3D19Q5HYK7 790 aa16.82■□□□□ 0.28
VEGFB-202ENST00000426086 POTEEQ6S8J3 1075 aa16.82■□□□□ 0.28
VEGFB-202ENST00000426086 TBC1D9Q6ZT07 1266 aa16.82■□□□□ 0.28
VEGFB-202ENST00000426086 XAGE2Q96GT9 111 aa16.82■□□□□ 0.28
VEGFB-202ENST00000426086 COPRSQ9NQ92 184 aa16.82■□□□□ 0.28
VEGFB-202ENST00000426086 MORF4L1Q9UBU8 362 aa16.82■□□□□ 0.28
VEGFB-202ENST00000426086 LAMA3Q16787 3333 aa16.82■□□□□ 0.28
VEGFB-202ENST00000426086 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
VEGFB-202ENST00000426086 ANP32CO43423 234 aa16.81■□□□□ 0.28
VEGFB-202ENST00000426086 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
VEGFB-202ENST00000426086 PRKAR2AP13861 404 aaKnown RBP16.81■□□□□ 0.28
VEGFB-202ENST00000426086 ERICH6Q7L0X2 663 aa16.81■□□□□ 0.28
VEGFB-202ENST00000426086 P2RX7Q99572 595 aaKnown RBP16.81■□□□□ 0.28
VEGFB-202ENST00000426086 UBE2OQ9C0C9 1292 aaKnown RBP16.81■□□□□ 0.28
VEGFB-202ENST00000426086 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
VEGFB-202ENST00000426086 USP17L5A8MUK1 530 aa16.8■□□□□ 0.28
VEGFB-202ENST00000426086 COL6A1P12109 1028 aa16.8■□□□□ 0.28
VEGFB-202ENST00000426086 TFCP2Q12800 502 aa16.8■□□□□ 0.28
VEGFB-202ENST00000426086 LRRC26Q2I0M4 334 aa16.8■□□□□ 0.28
VEGFB-202ENST00000426086 SLF2Q8IX21 1173 aa16.8■□□□□ 0.28
VEGFB-202ENST00000426086 NSUN4Q96CB9 384 aaKnown RBP16.8■□□□□ 0.28
VEGFB-202ENST00000426086 MEIS3Q99687 375 aa16.8■□□□□ 0.28
VEGFB-202ENST00000426086 COL2A1P02458 1487 aaPredicted RBP16.8■□□□□ 0.28
VEGFB-202ENST00000426086 CCND3P30281 292 aaPredicted RBP16.79■□□□□ 0.28
VEGFB-202ENST00000426086 CACNB2Q08289 660 aaPredicted RBP16.79■□□□□ 0.28
VEGFB-202ENST00000426086 MTMR2Q13614 643 aa16.79■□□□□ 0.28
VEGFB-202ENST00000426086 CCL14Q16627 93 aa16.79■□□□□ 0.28
VEGFB-202ENST00000426086 Q3C1V9 767 aa16.79■□□□□ 0.28
VEGFB-202ENST00000426086 SPTY2D1Q68D10 685 aaPredicted RBP16.79■□□□□ 0.28
VEGFB-202ENST00000426086 COL25A1Q9BXS0 654 aaPredicted RBP16.79■□□□□ 0.28
VEGFB-202ENST00000426086 DNAJC18Q9H819 358 aa16.79■□□□□ 0.28
VEGFB-202ENST00000426086 MDM2Q00987 491 aaPredicted RBP16.78■□□□□ 0.28
VEGFB-202ENST00000426086 SLFN5Q08AF3 891 aa16.78■□□□□ 0.28
VEGFB-202ENST00000426086 PABPC4Q13310 644 aaKnown RBP eCLIP16.78■□□□□ 0.284e-7■■■■□ 22.9
VEGFB-202ENST00000426086 LHX8Q68G74 356 aa16.78■□□□□ 0.28
VEGFB-202ENST00000426086 USP6NLQ92738 828 aa16.78■□□□□ 0.28
VEGFB-202ENST00000426086 CDCA7LQ96GN5 454 aa16.78■□□□□ 0.28
VEGFB-202ENST00000426086 PORCNQ9H237 461 aa16.78■□□□□ 0.28
VEGFB-202ENST00000426086 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
VEGFB-202ENST00000426086 RBPJLQ9UBG7 517 aa16.78■□□□□ 0.28
VEGFB-202ENST00000426086 ALDH1L2Q3SY69 923 aa16.77■□□□□ 0.28
VEGFB-202ENST00000426086 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
VEGFB-202ENST00000426086 NUDT12Q9BQG2 462 aa16.77■□□□□ 0.28
VEGFB-202ENST00000426086 NOB1Q9ULX3 412 aaKnown RBP16.77■□□□□ 0.28
VEGFB-202ENST00000426086 E9PSI1 815 aa16.76■□□□□ 0.27
VEGFB-202ENST00000426086 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
VEGFB-202ENST00000426086 BACE1P56817 501 aa16.76■□□□□ 0.27
VEGFB-202ENST00000426086 HERVK_113P62684 666 aa16.76■□□□□ 0.27
VEGFB-202ENST00000426086 IRX3P78415 501 aaPredicted RBP16.76■□□□□ 0.27
VEGFB-202ENST00000426086 SPATA5Q8NB90 893 aa16.76■□□□□ 0.27
VEGFB-202ENST00000426086 GUCD1Q96NT3 240 aa16.76■□□□□ 0.27
VEGFB-202ENST00000426086 WDR18Q9BV38 432 aa16.76■□□□□ 0.27
VEGFB-202ENST00000426086 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
VEGFB-202ENST00000426086 XRCC5P13010 732 aaKnown RBP16.75■□□□□ 0.27
VEGFB-202ENST00000426086 MCAMP43121 646 aa16.75■□□□□ 0.27
VEGFB-202ENST00000426086 MVPQ14764 893 aaKnown RBP16.75■□□□□ 0.27
VEGFB-202ENST00000426086 MORN1Q5T089 497 aa16.75■□□□□ 0.27
VEGFB-202ENST00000426086 TEX11Q8IYF3 940 aa16.75■□□□□ 0.27
VEGFB-202ENST00000426086 GPRC5AQ8NFJ5 357 aa16.75■□□□□ 0.27
VEGFB-202ENST00000426086 NEUROD6Q96NK8 337 aa16.75■□□□□ 0.27
VEGFB-202ENST00000426086 AS3MTQ9HBK9 375 aa16.75■□□□□ 0.27
VEGFB-202ENST00000426086 RAI14Q9P0K7 980 aa16.75■□□□□ 0.27
VEGFB-202ENST00000426086 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
VEGFB-202ENST00000426086 FRMPD3Q5JV73 1810 aa16.75■□□□□ 0.27
VEGFB-202ENST00000426086 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms