RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.33□□□□□ -0.6
NUP50-206ENST00000422489 SAP30BPQ9UHR5 308 aaKnown RBP11.33□□□□□ -0.6
NUP50-206ENST00000422489 AFG3L2Q9Y4W6 797 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 ATRNL1Q5VV63 1379 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
NUP50-206ENST00000422489 MYCP01106 439 aaPredicted RBP11.32□□□□□ -0.6
NUP50-206ENST00000422489 CYP2C8P10632 490 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 PSMC4P43686 418 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 USP5P45974 858 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 MAP3K12Q12852 859 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 MOGSQ13724 837 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 C17orf99Q6UX52 265 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 CRACR2BQ8N4Y2 399 aaPredicted RBP11.32□□□□□ -0.6
NUP50-206ENST00000422489 MAGEB6Q8N7X4 407 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 MIGA1Q8NAN2 632 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 DHX36Q9H2U1 1008 aaKnown RBP11.32□□□□□ -0.6
NUP50-206ENST00000422489 PI4KBQ9UBF8 816 aa11.32□□□□□ -0.6
NUP50-206ENST00000422489 RFX7Q2KHR2 1363 aa11.31□□□□□ -0.6
NUP50-206ENST00000422489 A0A0G2JLL6 359 aaPredicted RBP11.31□□□□□ -0.6
NUP50-206ENST00000422489 RAB11FIP3O75154 756 aa11.31□□□□□ -0.6
NUP50-206ENST00000422489 CAP2P40123 477 aa11.31□□□□□ -0.6
NUP50-206ENST00000422489 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
NUP50-206ENST00000422489 SPP2Q13103 211 aa11.31□□□□□ -0.6
NUP50-206ENST00000422489 SLC4A8Q2Y0W8 1093 aa11.31□□□□□ -0.6
NUP50-206ENST00000422489 PRRT2Q7Z6L0 340 aaPredicted RBP11.31□□□□□ -0.6
NUP50-206ENST00000422489 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
NUP50-206ENST00000422489 FOXP4Q8IVH2 680 aaPredicted RBP11.31□□□□□ -0.6
NUP50-206ENST00000422489 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
NUP50-206ENST00000422489 DNAJC2Q99543 621 aaKnown RBP11.31□□□□□ -0.6
NUP50-206ENST00000422489 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
NUP50-206ENST00000422489 PALD1Q9ULE6 856 aa11.31□□□□□ -0.6
NUP50-206ENST00000422489 PTCH2Q9Y6C5 1203 aa11.31□□□□□ -0.6
NUP50-206ENST00000422489 USP17L5A8MUK1 530 aa11.3□□□□□ -0.6
NUP50-206ENST00000422489 IGSF3O75054 1194 aa11.3□□□□□ -0.6
NUP50-206ENST00000422489 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
NUP50-206ENST00000422489 HOXD10P28358 340 aa11.3□□□□□ -0.6
NUP50-206ENST00000422489 PDE3AQ14432 1141 aa11.3□□□□□ -0.6
NUP50-206ENST00000422489 RRP1BQ14684 758 aaKnown RBP11.3□□□□□ -0.6
NUP50-206ENST00000422489 TTF1Q15361 905 aaPredicted RBP11.3□□□□□ -0.6
NUP50-206ENST00000422489 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
NUP50-206ENST00000422489 TMEM106CQ9BVX2 250 aa11.3□□□□□ -0.6
NUP50-206ENST00000422489 FLT1P17948 1338 aa11.3□□□□□ -0.6
NUP50-206ENST00000422489 GOLIM4O00461 696 aa11.29□□□□□ -0.6
NUP50-206ENST00000422489 SLC9C2Q5TAH2 1124 aa11.29□□□□□ -0.6
NUP50-206ENST00000422489 ZNF280CQ8ND82 737 aa11.29□□□□□ -0.6
NUP50-206ENST00000422489 SH3TC2Q8TF17 1288 aa11.29□□□□□ -0.6
NUP50-206ENST00000422489 TRIM47Q96LD4 638 aa11.29□□□□□ -0.6
NUP50-206ENST00000422489 AS3MTQ9HBK9 375 aa11.29□□□□□ -0.6
NUP50-206ENST00000422489 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 GDF11O95390 407 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 GNRH1P01148 92 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 EN2P19622 333 aaPredicted RBP11.28□□□□□ -0.6
NUP50-206ENST00000422489 OSBPP22059 807 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 CTGFP29279 349 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 PRMT2P55345 433 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 TREML2Q5T2D2 321 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 RAET1EQ8TD07 263 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 SMCR8Q8TEV9 937 aaPredicted RBP11.28□□□□□ -0.6
NUP50-206ENST00000422489 ARMC5Q96C12 935 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 BOLA2Q9H3K6 86 aa11.28□□□□□ -0.6
NUP50-206ENST00000422489 BIN2Q9UBW5 565 aaPredicted RBP11.28□□□□□ -0.6
NUP50-206ENST00000422489 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.6
NUP50-206ENST00000422489 OTOFQ9HC10 1997 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 SMARCA5O60264 1052 aaPredicted RBP11.27□□□□□ -0.61
NUP50-206ENST00000422489 POLR3DP05423 398 aaPredicted RBP11.27□□□□□ -0.61
NUP50-206ENST00000422489 HMGCS2P54868 508 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 FCGRTP55899 365 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 JAG1P78504 1218 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 PABPC4Q13310 644 aaKnown RBP eCLIP11.27□□□□□ -0.61
NUP50-206ENST00000422489 TTC6Q86TZ1 520 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 CERS3Q8IU89 383 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 EDC3Q96F86 508 aaKnown RBP11.27□□□□□ -0.61
NUP50-206ENST00000422489 TBC1D2Q9BYX2 928 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 SRRDQ9UH36 339 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 AGTPBP1Q9UPW5 1226 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 SLC45A1Q9Y2W3 748 aa11.27□□□□□ -0.61
NUP50-206ENST00000422489 ASNSP08243 561 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 BCRP11274 1271 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 PDE6AP16499 860 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 SHROOM1Q2M3G4 852 aaPredicted RBP11.26□□□□□ -0.61
NUP50-206ENST00000422489 ANKRD13CQ8N6S4 541 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
NUP50-206ENST00000422489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.26□□□□□ -0.61
NUP50-206ENST00000422489 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 YTHDC1Q96MU7 727 aaKnown RBP11.26□□□□□ -0.61
NUP50-206ENST00000422489 LRRCC1Q9C099 1032 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 PAG1Q9NWQ8 432 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 ADGRA2Q96PE1 1338 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
NUP50-206ENST00000422489 MYH2Q9UKX2 1941 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
NUP50-206ENST00000422489 ATP5JP18859 108 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 BACE1P56817 501 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 PRKCZQ05513 592 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms