RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 TBC1D2Q9BYX2 928 aa22.95■■□□□ 1.26
AC004540.1-203ENST00000421862 GPR108Q9NPR9 543 aa22.95■■□□□ 1.26
AC004540.1-203ENST00000421862 FXR1P51114 621 aaKnown RBP eCLIP22.94■■□□□ 1.26
AC004540.1-203ENST00000421862 UBXN2AP68543 259 aa22.94■■□□□ 1.26
AC004540.1-203ENST00000421862 G3BP1Q13283 466 aaKnown RBP eCLIP22.94■■□□□ 1.26
AC004540.1-203ENST00000421862 IRF5Q13568 498 aa22.94■■□□□ 1.26
AC004540.1-203ENST00000421862 GORABQ5T7V8 394 aa22.94■■□□□ 1.26
AC004540.1-203ENST00000421862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.94■■□□□ 1.26
AC004540.1-203ENST00000421862 FAM110CQ1W6H9 321 aa22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 TREML2Q5T2D2 321 aa22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 TMEM57Q8N5G2 664 aa22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 PXYLP1Q8TE99 480 aa22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 SMCR8Q8TEV9 937 aaPredicted RBP22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 FRAT1Q92837 279 aaPredicted RBP22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 CLUAP1Q96AJ1 413 aa22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 RAI14Q9P0K7 980 aa22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 RANBP2P49792 3224 aaKnown RBP22.93■■□□□ 1.26
AC004540.1-203ENST00000421862 FLT3LGP49771 235 aa22.92■■□□□ 1.26
AC004540.1-203ENST00000421862 SSH3Q8TE77 659 aa22.92■■□□□ 1.26
AC004540.1-203ENST00000421862 RNF208Q9H0X6 261 aa22.92■■□□□ 1.26
AC004540.1-203ENST00000421862 HERC5Q9UII4 1024 aaKnown RBP22.92■■□□□ 1.26
AC004540.1-203ENST00000421862 PNMA3Q9UL41 463 aa22.92■■□□□ 1.26
AC004540.1-203ENST00000421862 COLQQ9Y215 455 aaPredicted RBP22.92■■□□□ 1.26
AC004540.1-203ENST00000421862 H0YGN5 161 aa22.91■■□□□ 1.26
AC004540.1-203ENST00000421862 CAP2P40123 477 aa22.91■■□□□ 1.26
AC004540.1-203ENST00000421862 RRP1BQ14684 758 aaKnown RBP22.91■■□□□ 1.26
AC004540.1-203ENST00000421862 TNNI3KQ59H18 835 aa22.91■■□□□ 1.26
AC004540.1-203ENST00000421862 TEX11Q8IYF3 940 aa22.91■■□□□ 1.26
AC004540.1-203ENST00000421862 ZNF280CQ8ND82 737 aa22.91■■□□□ 1.26
AC004540.1-203ENST00000421862 FPGT-TNNI3KV9GXZ4 949 aa22.91■■□□□ 1.26
AC004540.1-203ENST00000421862 TNPO2O14787 897 aaKnown RBP22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 ADCY3O60266 1144 aa22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 IGSF3O75054 1194 aa22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 SH3D19Q5HYK7 790 aa22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 ZKSCAN2Q63HK3 967 aa22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 SH3RF3Q8TEJ3 882 aaPredicted RBP22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 U2AF1L4Q8WU68 220 aaKnown RBP22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 ZNF512BQ96KM6 892 aaPredicted RBP22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 UNC93B1Q9H1C4 597 aa22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 LRP2BPQ9P2M1 347 aa22.9■■□□□ 1.26
AC004540.1-203ENST00000421862 SPP2Q13103 211 aa22.89■■□□□ 1.25
AC004540.1-203ENST00000421862 ANKRD13CQ8N6S4 541 aa22.89■■□□□ 1.25
AC004540.1-203ENST00000421862 DBNDD2Q9BQY9 259 aa22.89■■□□□ 1.25
AC004540.1-203ENST00000421862 FLT1P17948 1338 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 NAV1Q8NEY1 1877 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 INHAP05111 366 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 ELNP15502 786 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 PPP4CP60510 307 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 ADGRA1Q86SQ6 560 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 METTL16Q86W50 562 aaKnown RBP22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 DHX36Q9H2U1 1008 aaKnown RBP22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 DNAJC18Q9H819 358 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 PI4KBQ9UBF8 816 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 BIN2Q9UBW5 565 aaPredicted RBP22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 SZT2Q5T011 3432 aa22.88■■□□□ 1.25
AC004540.1-203ENST00000421862 USP17L5A8MUK1 530 aa22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 CYP2E1P05181 493 aaPredicted RBP22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 PLCG2P16885 1265 aa22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 CAPN2P17655 700 aa22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 GCLCP48506 637 aaPredicted RBP22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 HMGCS2P54868 508 aa22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 TTC39AQ5SRH9 613 aa22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 NAA16Q6N069 864 aaPredicted RBP22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 PAK6Q9NQU5 681 aaPredicted RBP22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 AATFQ9NY61 560 aaKnown RBP eCLIP22.87■■□□□ 1.25
AC004540.1-203ENST00000421862 FARP2O94887 1054 aaPredicted RBP22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 SGPL1O95470 568 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 BAG3O95817 575 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 ATP8B2P98198 1209 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 PABPC4Q13310 644 aaKnown RBP eCLIP22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 CCDC158Q5M9N0 1113 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 NOL10Q9BSC4 688 aaKnown RBP22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 HTATIP2Q9BUP3 242 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 WDR18Q9BV38 432 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 AS3MTQ9HBK9 375 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 SNRKQ9NRH2 765 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 NOP58Q9Y2X3 529 aaKnown RBP22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 FRMPD3Q5JV73 1810 aa22.86■■□□□ 1.25
AC004540.1-203ENST00000421862 COA7Q96BR5 231 aa22.85■■□□□ 1.25
AC004540.1-203ENST00000421862 ASCC2Q9H1I8 757 aaPredicted RBP22.84■■□□□ 1.25
AC004540.1-203ENST00000421862 MORF4L1Q9UBU8 362 aa22.84■■□□□ 1.25
AC004540.1-203ENST00000421862 DBNLQ9UJU6 430 aaKnown RBP22.84■■□□□ 1.25
AC004540.1-203ENST00000421862 ASNSP08243 561 aa22.83■■□□□ 1.25
AC004540.1-203ENST00000421862 CRISPLD2Q9H0B8 497 aa22.83■■□□□ 1.25
AC004540.1-203ENST00000421862 PRO3102Q9H379 93 aa22.83■■□□□ 1.25
AC004540.1-203ENST00000421862 C1orf115Q9H7X2 142 aa22.83■■□□□ 1.25
AC004540.1-203ENST00000421862 GINM1Q9NU53 330 aa22.83■■□□□ 1.25
AC004540.1-203ENST00000421862 SURF6O75683 361 aaKnown RBP22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 ZAP70P43403 619 aa22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 BACE1P56817 501 aa22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 JAG1P78504 1218 aa22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 OS9Q13438 667 aaPredicted RBP22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 MTMR2Q13614 643 aa22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 CHRDL2Q6WN34 429 aa22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 MAPKAPK5Q8IW41 473 aa22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 TGFBRAP1Q8WUH2 860 aa22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 DPF3Q92784 378 aa22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 PIH1D3Q9NQM4 214 aaKnown RBP22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 TLR7Q9NYK1 1049 aaKnown RBP22.82■■□□□ 1.24
AC004540.1-203ENST00000421862 RLBP1P12271 317 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms