RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ZNF384Q8TF68 577 aa20.61■□□□□ 0.89
MRPL55-220ENST00000411464 NSUN4Q96CB9 384 aaKnown RBP20.61■□□□□ 0.89
MRPL55-220ENST00000411464 TBC1D2Q9BYX2 928 aa20.61■□□□□ 0.89
MRPL55-220ENST00000411464 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
MRPL55-220ENST00000411464 EVI5O60447 810 aa20.6■□□□□ 0.89
MRPL55-220ENST00000411464 GCLCP48506 637 aaPredicted RBP20.6■□□□□ 0.89
MRPL55-220ENST00000411464 PI16Q6UXB8 463 aa20.6■□□□□ 0.89
MRPL55-220ENST00000411464 LRP2BPQ9P2M1 347 aa20.6■□□□□ 0.89
MRPL55-220ENST00000411464 CEP290O15078 2479 aa20.6■□□□□ 0.89
MRPL55-220ENST00000411464 ZBTB7BO15156 539 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-220ENST00000411464 IPO8O15397 1037 aaKnown RBP20.59■□□□□ 0.89
MRPL55-220ENST00000411464 CAP2P40123 477 aa20.59■□□□□ 0.89
MRPL55-220ENST00000411464 G3BP1Q13283 466 aaKnown RBP eCLIP20.59■□□□□ 0.89
MRPL55-220ENST00000411464 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
MRPL55-220ENST00000411464 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-220ENST00000411464 USP17L5A8MUK1 530 aa20.58■□□□□ 0.89
MRPL55-220ENST00000411464 ARID4AP29374 1257 aaPredicted RBP20.58■□□□□ 0.89
MRPL55-220ENST00000411464 HMGCS2P54868 508 aa20.58■□□□□ 0.89
MRPL55-220ENST00000411464 TEX11Q8IYF3 940 aa20.58■□□□□ 0.89
MRPL55-220ENST00000411464 PAK6Q9NQU5 681 aaPredicted RBP20.58■□□□□ 0.89
MRPL55-220ENST00000411464 HERC5Q9UII4 1024 aaKnown RBP20.58■□□□□ 0.89
MRPL55-220ENST00000411464 GNAI2P04899 355 aa20.57■□□□□ 0.88
MRPL55-220ENST00000411464 UQCRFS1P1P0C7P4 283 aa20.57■□□□□ 0.88
MRPL55-220ENST00000411464 AS3MTQ9HBK9 375 aa20.57■□□□□ 0.88
MRPL55-220ENST00000411464 TRIOBPQ9H2D6 2365 aa20.56■□□□□ 0.88
MRPL55-220ENST00000411464 BAG3O95817 575 aa20.56■□□□□ 0.88
MRPL55-220ENST00000411464 CRISPLD2Q9H0B8 497 aa20.56■□□□□ 0.88
MRPL55-220ENST00000411464 ASCC2Q9H1I8 757 aaPredicted RBP20.56■□□□□ 0.88
MRPL55-220ENST00000411464 DHX36Q9H2U1 1008 aaKnown RBP20.56■□□□□ 0.88
MRPL55-220ENST00000411464 PRO3102Q9H379 93 aa20.56■□□□□ 0.88
MRPL55-220ENST00000411464 PI4KBQ9UBF8 816 aa20.56■□□□□ 0.88
MRPL55-220ENST00000411464 MYH2Q9UKX2 1941 aa20.55■□□□□ 0.88
MRPL55-220ENST00000411464 MCAMP43121 646 aa20.55■□□□□ 0.88
MRPL55-220ENST00000411464 SH3RF3Q8TEJ3 882 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-220ENST00000411464 PAWRQ96IZ0 340 aaKnown RBP20.55■□□□□ 0.88
MRPL55-220ENST00000411464 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.55■□□□□ 0.88
MRPL55-220ENST00000411464 HMGCRP04035 888 aa20.54■□□□□ 0.88
MRPL55-220ENST00000411464 PLCG2P16885 1265 aa20.54■□□□□ 0.88
MRPL55-220ENST00000411464 RRP1BQ14684 758 aaKnown RBP20.54■□□□□ 0.88
MRPL55-220ENST00000411464 SH3D19Q5HYK7 790 aa20.54■□□□□ 0.88
MRPL55-220ENST00000411464 NAA16Q6N069 864 aaPredicted RBP20.54■□□□□ 0.88
MRPL55-220ENST00000411464 NECAB2Q7Z6G3 386 aa20.54■□□□□ 0.88
MRPL55-220ENST00000411464 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
MRPL55-220ENST00000411464 DOCK2Q92608 1830 aa20.54■□□□□ 0.88
MRPL55-220ENST00000411464 COL2A1P02458 1487 aaPredicted RBP20.54■□□□□ 0.88
MRPL55-220ENST00000411464 RANBP2P49792 3224 aaKnown RBP20.53■□□□□ 0.88
MRPL55-220ENST00000411464 PNMA6EA0A0J9YXQ4 647 aa20.53■□□□□ 0.88
MRPL55-220ENST00000411464 TRIM27P14373 513 aa20.53■□□□□ 0.88
MRPL55-220ENST00000411464 IRX3P78415 501 aaPredicted RBP20.53■□□□□ 0.88
MRPL55-220ENST00000411464 WDR18Q9BV38 432 aa20.53■□□□□ 0.88
MRPL55-220ENST00000411464 AATFQ9NY61 560 aaKnown RBP eCLIP20.53■□□□□ 0.88
MRPL55-220ENST00000411464 TMOD4Q9NZQ9 345 aa20.53■□□□□ 0.88
MRPL55-220ENST00000411464 A0A1W2PPC1 479 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 ASNSP08243 561 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 MTMR2Q13614 643 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 CCDC158Q5M9N0 1113 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 TTC39AQ5SRH9 613 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 ATF7IPQ6VMQ6 1270 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 TRIM34Q9BYJ4 488 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 HMX1Q9NP08 348 aaPredicted RBP20.52■□□□□ 0.88
MRPL55-220ENST00000411464 SNRKQ9NRH2 765 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 GJD2Q9UKL4 321 aa20.52■□□□□ 0.88
MRPL55-220ENST00000411464 RPTORQ8N122 1335 aa20.52■□□□□ 0.87
MRPL55-220ENST00000411464 BACE1P56817 501 aa20.51■□□□□ 0.87
MRPL55-220ENST00000411464 FOXP4Q8IVH2 680 aaPredicted RBP20.51■□□□□ 0.87
MRPL55-220ENST00000411464 CRACR2BQ8N4Y2 399 aaPredicted RBP20.51■□□□□ 0.87
MRPL55-220ENST00000411464 ANKLE1Q8NAG6 615 aa20.51■□□□□ 0.87
MRPL55-220ENST00000411464 TGFBRAP1Q8WUH2 860 aa20.51■□□□□ 0.87
MRPL55-220ENST00000411464 STAP2Q9UGK3 403 aa20.51■□□□□ 0.87
MRPL55-220ENST00000411464 DOCK1Q14185 1865 aa20.5■□□□□ 0.87
MRPL55-220ENST00000411464 PPP4CP60510 307 aa20.5■□□□□ 0.87
MRPL55-220ENST00000411464 OS9Q13438 667 aaPredicted RBP20.5■□□□□ 0.87
MRPL55-220ENST00000411464 MAPKAPK5Q8IW41 473 aa20.5■□□□□ 0.87
MRPL55-220ENST00000411464 DIS3LQ8TF46 1054 aaKnown RBP20.5■□□□□ 0.87
MRPL55-220ENST00000411464 GPR108Q9NPR9 543 aa20.5■□□□□ 0.87
MRPL55-220ENST00000411464 MORF4L1Q9UBU8 362 aa20.5■□□□□ 0.87
MRPL55-220ENST00000411464 C19orf81C9J6K1 198 aa20.49■□□□□ 0.87
MRPL55-220ENST00000411464 BCAR3O75815 825 aa20.49■□□□□ 0.87
MRPL55-220ENST00000411464 HOXA7P31268 230 aaPredicted RBP20.49■□□□□ 0.87
MRPL55-220ENST00000411464 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
MRPL55-220ENST00000411464 GPRC5AQ8NFJ5 357 aa20.49■□□□□ 0.87
MRPL55-220ENST00000411464 P2RX7Q99572 595 aaKnown RBP20.49■□□□□ 0.87
MRPL55-220ENST00000411464 NBPF3Q9H094 633 aa20.49■□□□□ 0.87
MRPL55-220ENST00000411464 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
MRPL55-220ENST00000411464 USP17L10C9JJH3 530 aa20.48■□□□□ 0.87
MRPL55-220ENST00000411464 CYP2B6P20813 491 aa20.48■□□□□ 0.87
MRPL55-220ENST00000411464 CCAR1Q8IX12 1150 aaKnown RBP20.48■□□□□ 0.87
MRPL55-220ENST00000411464 NUDT12Q9BQG2 462 aa20.48■□□□□ 0.87
MRPL55-220ENST00000411464 GINM1Q9NU53 330 aa20.48■□□□□ 0.87
MRPL55-220ENST00000411464 PALD1Q9ULE6 856 aa20.48■□□□□ 0.87
MRPL55-220ENST00000411464 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
MRPL55-220ENST00000411464 MGAMO43451 1857 aa20.47■□□□□ 0.87
MRPL55-220ENST00000411464 IGSF3O75054 1194 aa20.47■□□□□ 0.87
MRPL55-220ENST00000411464 CYP2E1P05181 493 aaPredicted RBP20.47■□□□□ 0.87
MRPL55-220ENST00000411464 HERVK_113P62684 666 aa20.47■□□□□ 0.87
MRPL55-220ENST00000411464 TRIM32Q13049 653 aa20.47■□□□□ 0.87
MRPL55-220ENST00000411464 METTL16Q86W50 562 aaKnown RBP20.47■□□□□ 0.87
MRPL55-220ENST00000411464 C7orf61Q8IZ16 206 aa20.47■□□□□ 0.87
MRPL55-220ENST00000411464 DBNDD2Q9BQY9 259 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms