RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 USP17L5A8MUK1 530 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 SLC34A2O95436 690 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 OSBPP22059 807 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 PROCA1Q8NCQ7 364 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-210ENST00000409954 ZNF280CQ8ND82 737 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 RAET1EQ8TD07 263 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 TGFBRAP1Q8WUH2 860 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 CHMP4BQ9H444 224 aaKnown RBP17.74■□□□□ 0.43
MCF2L-210ENST00000409954 AS3MTQ9HBK9 375 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 GINM1Q9NU53 330 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 DBNLQ9UJU6 430 aaKnown RBP17.74■□□□□ 0.43
MCF2L-210ENST00000409954 AGTPBP1Q9UPW5 1226 aa17.74■□□□□ 0.43
MCF2L-210ENST00000409954 COL2A1P02458 1487 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-210ENST00000409954 SLURP2P0DP57 97 aa17.73■□□□□ 0.43
MCF2L-210ENST00000409954 SPP2Q13103 211 aa17.73■□□□□ 0.43
MCF2L-210ENST00000409954 PABPC4Q13310 644 aaKnown RBP eCLIP17.73■□□□□ 0.43
MCF2L-210ENST00000409954 RPAP2Q8IXW5 612 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-210ENST00000409954 SH3TC2Q8TF17 1288 aa17.73■□□□□ 0.43
MCF2L-210ENST00000409954 PNMA3Q9UL41 463 aa17.73■□□□□ 0.43
MCF2L-210ENST00000409954 CTGFP29279 349 aa17.72■□□□□ 0.43
MCF2L-210ENST00000409954 GRK4P32298 578 aa17.72■□□□□ 0.43
MCF2L-210ENST00000409954 METTL16Q86W50 562 aaKnown RBP17.72■□□□□ 0.43
MCF2L-210ENST00000409954 PANK1Q8TE04 598 aa17.72■□□□□ 0.43
MCF2L-210ENST00000409954 SMCR8Q8TEV9 937 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-210ENST00000409954 GCC1Q96CN9 775 aa17.72■□□□□ 0.43
MCF2L-210ENST00000409954 ASNSP08243 561 aa17.71■□□□□ 0.43
MCF2L-210ENST00000409954 CYP7A1P22680 504 aa17.71■□□□□ 0.43
MCF2L-210ENST00000409954 SH3D19Q5HYK7 790 aa17.71■□□□□ 0.43
MCF2L-210ENST00000409954 NKX2-3Q8TAU0 364 aa17.71■□□□□ 0.43
MCF2L-210ENST00000409954 WDR18Q9BV38 432 aa17.71■□□□□ 0.43
MCF2L-210ENST00000409954 TRIM34Q9BYJ4 488 aa17.71■□□□□ 0.43
MCF2L-210ENST00000409954 PIH1D3Q9NQM4 214 aaKnown RBP17.71■□□□□ 0.43
MCF2L-210ENST00000409954 MYPNQ86TC9 1320 aa17.71■□□□□ 0.42
MCF2L-210ENST00000409954 FAM196BA6NMK8 535 aa17.7■□□□□ 0.42
MCF2L-210ENST00000409954 HMMRO75330 724 aa17.7■□□□□ 0.42
MCF2L-210ENST00000409954 IDH1O75874 414 aaKnown RBP17.7■□□□□ 0.42
MCF2L-210ENST00000409954 ECM2O94769 699 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-210ENST00000409954 CAPN2P17655 700 aa17.7■□□□□ 0.42
MCF2L-210ENST00000409954 GCLCP48506 637 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-210ENST00000409954 UBXN2AP68543 259 aa17.7■□□□□ 0.42
MCF2L-210ENST00000409954 MAP3K12Q12852 859 aa17.7■□□□□ 0.42
MCF2L-210ENST00000409954 MAPKAPK5Q8IW41 473 aa17.7■□□□□ 0.42
MCF2L-210ENST00000409954 DDX19BQ9UMR2 479 aa17.7■□□□□ 0.42
MCF2L-210ENST00000409954 C19orf81C9J6K1 198 aa17.69■□□□□ 0.42
MCF2L-210ENST00000409954 HLA-DOAP06340 250 aa17.69■□□□□ 0.42
MCF2L-210ENST00000409954 ADGRA1Q86SQ6 560 aa17.69■□□□□ 0.42
MCF2L-210ENST00000409954 AACSQ86V21 672 aa17.69■□□□□ 0.42
MCF2L-210ENST00000409954 CLASRPQ8N2M8 674 aaKnown RBP17.69■□□□□ 0.42
MCF2L-210ENST00000409954 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-210ENST00000409954 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
MCF2L-210ENST00000409954 BIN2Q9UBW5 565 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-210ENST00000409954 PALD1Q9ULE6 856 aa17.69■□□□□ 0.42
MCF2L-210ENST00000409954 EXOC6BQ9Y2D4 811 aa17.69■□□□□ 0.42
MCF2L-210ENST00000409954 KIAA0100Q14667 2235 aaKnown RBP17.68■□□□□ 0.42
MCF2L-210ENST00000409954 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-210ENST00000409954 RRP1BQ14684 758 aaKnown RBP17.68■□□□□ 0.42
MCF2L-210ENST00000409954 TTF1Q15361 905 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-210ENST00000409954 CCDC84Q86UT8 332 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-210ENST00000409954 SLAIN1Q8ND83 568 aa17.68■□□□□ 0.42
MCF2L-210ENST00000409954 PXYLP1Q8TE99 480 aa17.68■□□□□ 0.42
MCF2L-210ENST00000409954 COA7Q96BR5 231 aa17.68■□□□□ 0.42
MCF2L-210ENST00000409954 KIF1BPQ96EK5 621 aa17.68■□□□□ 0.42
MCF2L-210ENST00000409954 TLR7Q9NYK1 1049 aaKnown RBP17.68■□□□□ 0.42
MCF2L-210ENST00000409954 FLT1P17948 1338 aa17.68■□□□□ 0.42
MCF2L-210ENST00000409954 TNPO2O14787 897 aaKnown RBP17.67■□□□□ 0.42
MCF2L-210ENST00000409954 RAB11FIP3O75154 756 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 GJB1P08034 283 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 HMGCS2P54868 508 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 BACE1P56817 501 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 PRKCZQ05513 592 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 IRF5Q13568 498 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 FAM110CQ1W6H9 321 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 TREML2Q5T2D2 321 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 TTC6Q86TZ1 520 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 ZBTB40Q9NUA8 1239 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 TMOD4Q9NZQ9 345 aa17.67■□□□□ 0.42
MCF2L-210ENST00000409954 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-210ENST00000409954 ADCY3O60266 1144 aa17.66■□□□□ 0.42
MCF2L-210ENST00000409954 HOXA7P31268 230 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-210ENST00000409954 USP5P45974 858 aa17.66■□□□□ 0.42
MCF2L-210ENST00000409954 FLT3LGP49771 235 aa17.66■□□□□ 0.42
MCF2L-210ENST00000409954 DYNLL1P63167 89 aaKnown RBP17.66■□□□□ 0.42
MCF2L-210ENST00000409954 MTFR1Q15390 333 aa17.66■□□□□ 0.42
MCF2L-210ENST00000409954 ANKRD13CQ8N6S4 541 aa17.66■□□□□ 0.42
MCF2L-210ENST00000409954 MAGEB6Q8N7X4 407 aa17.66■□□□□ 0.42
MCF2L-210ENST00000409954 GABRQQ9UN88 632 aa17.66■□□□□ 0.42
MCF2L-210ENST00000409954 USP17L10C9JJH3 530 aa17.65■□□□□ 0.42
MCF2L-210ENST00000409954 CCL5P13501 91 aa17.65■□□□□ 0.42
MCF2L-210ENST00000409954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.65■□□□□ 0.42
MCF2L-210ENST00000409954 RNF208Q9H0X6 261 aa17.65■□□□□ 0.42
MCF2L-210ENST00000409954 ASCC2Q9H1I8 757 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-210ENST00000409954 ANTXR1Q9H6X2 564 aa17.65■□□□□ 0.42
MCF2L-210ENST00000409954 IL1RAPL2Q9NP60 686 aa17.65■□□□□ 0.42
MCF2L-210ENST00000409954 COG6Q9Y2V7 657 aa17.65■□□□□ 0.42
MCF2L-210ENST00000409954 TNRC18O15417 2968 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-210ENST00000409954 IFIT2P09913 472 aaKnown RBP17.64■□□□□ 0.41
MCF2L-210ENST00000409954 GJA8P48165 433 aa17.64■□□□□ 0.41
MCF2L-210ENST00000409954 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
MCF2L-210ENST00000409954 SAP30BPQ9UHR5 308 aaKnown RBP17.64■□□□□ 0.41
MCF2L-210ENST00000409954 RCAN3Q9UKA8 241 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms