RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SNRPA1P09661 255 aaKnown RBP5.59□□□□□ -1.51
SF3B1-202ENST00000409915 GJA8P48165 433 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 CBLBQ13191 982 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 UBE4AQ14139 1066 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 TRAPPC3LQ5T215 181 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 RC3H1Q5TC82 1133 aaKnown RBP5.59□□□□□ -1.51
SF3B1-202ENST00000409915 ZNF697Q5TEC3 545 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 KRBA2Q6ZNG9 492 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 ZNF598Q86UK7 904 aaKnown RBP5.59□□□□□ -1.51
SF3B1-202ENST00000409915 CEP89Q96ST8 783 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 PDCL3Q9H2J4 239 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 TMX1Q9H3N1 280 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 MBIPQ9NS73 344 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 FANCLQ9NW38 375 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 PCDHB9Q9Y5E1 797 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 COMMD10Q9Y6G5 202 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 LAMB4A4D0S4 1761 aa5.59□□□□□ -1.51
SF3B1-202ENST00000409915 USP42Q9H9J4 1324 aaKnown RBP5.58□□□□□ -1.52
SF3B1-202ENST00000409915 CCER2I3L3R5 266 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 KIF4AO95239 1232 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 STARD3NLO95772 234 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 ANXA1P04083 346 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 HSP90AA1P07900 732 aaKnown RBP5.58□□□□□ -1.52
SF3B1-202ENST00000409915 CTSHP09668 335 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 EIF2S2P20042 333 aaKnown RBP5.58□□□□□ -1.52
SF3B1-202ENST00000409915 WEE1P30291 646 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 GNA15P30679 374 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 RFC4P35249 363 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 CHMP4BP1P59074 171 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 FOXC1Q12948 553 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 PAK2Q13177 524 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 OS9Q13438 667 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-202ENST00000409915 PROSER3Q2NL68 480 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 TSGA10IPQ3SY00 556 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 MAP9Q49MG5 647 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 MSS51Q4VC12 460 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 ALG1LQ6GMV1 187 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 CCSAPQ6IQ19 270 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-202ENST00000409915 NBPF10Q6P3W6 841 aaKnown RBP5.58□□□□□ -1.52
SF3B1-202ENST00000409915 HS2ST1Q7LGA3 356 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 NGEFQ8N5V2 710 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 NBPF15Q8N660 670 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 NEUROD4Q9HD90 331 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 PKD2L1Q9P0L9 805 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 SIRPGQ9P1W8 387 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 RPS6KL1Q9Y6S9 549 aa5.58□□□□□ -1.52
SF3B1-202ENST00000409915 SCN7AQ01118 1682 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 PNMA6FA0A0J9YX94 578 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 FAM187AA6NFU0 413 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 ELL2O00472 640 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 TNFRSF10BO14763 440 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 ZBTB24O43167 697 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 GDF9O60383 454 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 IGHA2P01877 340 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 SSBP05455 408 aaKnown RBP eCLIP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 MMP10P09238 476 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 ZNF853P0CG23 659 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 GYS1P13807 737 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 MYL6BP14649 208 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 POLD1P28340 1107 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 MMP16P51512 607 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 EIF5P55010 431 aaKnown RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 GNAI1P63096 354 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 PTPN12Q05209 780 aaKnown RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 Q3C1V9 767 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 OXLD1Q5BKU9 147 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 UTP14CQ5TAP6 766 aaKnown RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 USPL1Q5W0Q7 1092 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 BICDL1Q6ZP65 573 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 WDR75Q8IWA0 830 aaKnown RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 FTSJ3Q8IY81 847 aaKnown RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 FLAD1Q8NFF5 587 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 SLC16A10Q8TF71 515 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 COL26A1Q96A83 441 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 GPRASP2Q96D09 838 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 SCYL1Q96KG9 808 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 FAM129BQ96TA1 746 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 USB1Q9BQ65 265 aaKnown RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 MTA3Q9BTC8 594 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 FHDC1Q9C0D6 1143 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-202ENST00000409915 C12orf49Q9H741 205 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 HOMER2Q9NSB8 354 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 PPP4R2Q9NY27 417 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 SNTG2Q9NY99 539 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 DOLKQ9UPQ8 538 aa5.57□□□□□ -1.52
SF3B1-202ENST00000409915 GOLGB1Q14789 3259 aaKnown RBP5.56□□□□□ -1.52
SF3B1-202ENST00000409915 TCERG1O14776 1098 aaKnown RBP5.56□□□□□ -1.52
SF3B1-202ENST00000409915 PLIN1O60240 522 aa5.56□□□□□ -1.52
SF3B1-202ENST00000409915 DXOO77932 396 aaKnown RBP5.56□□□□□ -1.52
SF3B1-202ENST00000409915 VIL1P09327 827 aaKnown RBP5.56□□□□□ -1.52
SF3B1-202ENST00000409915 IL6STP40189 918 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-202ENST00000409915 DDR1Q08345 913 aa5.56□□□□□ -1.52
SF3B1-202ENST00000409915 DUSP27Q5VZP5 1158 aa5.56□□□□□ -1.52
SF3B1-202ENST00000409915 TTLL7Q6ZT98 887 aa5.56□□□□□ -1.52
SF3B1-202ENST00000409915 DZIP3Q86Y13 1208 aaKnown RBP5.56□□□□□ -1.52
SF3B1-202ENST00000409915 TSPYL6Q8N831 410 aa5.56□□□□□ -1.52
SF3B1-202ENST00000409915 C8orf58Q8NAV2 365 aa5.56□□□□□ -1.52
SF3B1-202ENST00000409915 NLGN2Q8NFZ4 835 aa5.56□□□□□ -1.52
SF3B1-202ENST00000409915 SH3TC2Q8TF17 1288 aa5.56□□□□□ -1.52
SF3B1-202ENST00000409915 APPBP2Q92624 585 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms