RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PCNTO95613 3336 aa26.92■■□□□ 1.9
PTCD3-203ENST00000409783 GJA5P36382 358 aa26.91■■□□□ 1.9
PTCD3-203ENST00000409783 SPRYD7Q5W111 196 aa26.91■■□□□ 1.9
PTCD3-203ENST00000409783 RILPL2Q969X0 211 aa26.91■■□□□ 1.9
PTCD3-203ENST00000409783 WNK4Q96J92 1243 aa26.91■■□□□ 1.9
PTCD3-203ENST00000409783 ELP3Q9H9T3 547 aa26.91■■□□□ 1.9
PTCD3-203ENST00000409783 ATP8A2Q9NTI2 1148 aa26.91■■□□□ 1.9
PTCD3-203ENST00000409783 HERC5Q9UII4 1024 aaKnown RBP26.91■■□□□ 1.9
PTCD3-203ENST00000409783 GPAA1O43292 621 aa26.9■■□□□ 1.9
PTCD3-203ENST00000409783 NOL9Q5SY16 702 aaKnown RBP26.9■■□□□ 1.9
PTCD3-203ENST00000409783 FOXP4Q8IVH2 680 aaPredicted RBP26.9■■□□□ 1.9
PTCD3-203ENST00000409783 CSADQ9Y600 493 aa26.9■■□□□ 1.9
PTCD3-203ENST00000409783 SLC4A4Q9Y6R1 1079 aa26.9■■□□□ 1.9
PTCD3-203ENST00000409783 DOCK1Q14185 1865 aa26.89■■□□□ 1.9
PTCD3-203ENST00000409783 KIF23Q02241 960 aaPredicted RBP26.89■■□□□ 1.9
PTCD3-203ENST00000409783 EVX2Q03828 476 aa26.89■■□□□ 1.9
PTCD3-203ENST00000409783 RRP1BQ14684 758 aaKnown RBP26.89■■□□□ 1.9
PTCD3-203ENST00000409783 SLC4A8Q2Y0W8 1093 aa26.89■■□□□ 1.9
PTCD3-203ENST00000409783 SKAP1Q86WV1 359 aa26.89■■□□□ 1.9
PTCD3-203ENST00000409783 CNKSR2Q8WXI2 1034 aa26.89■■□□□ 1.9
PTCD3-203ENST00000409783 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.89■■□□□ 1.9
PTCD3-203ENST00000409783 GSG1L2A8MUP6 293 aa26.88■■□□□ 1.89
PTCD3-203ENST00000409783 PLCD1P51178 756 aa26.88■■□□□ 1.89
PTCD3-203ENST00000409783 EHD4Q9H223 541 aa26.88■■□□□ 1.89
PTCD3-203ENST00000409783 MCM9Q9NXL9 1143 aa26.88■■□□□ 1.89
PTCD3-203ENST00000409783 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.88■■□□□ 1.89
PTCD3-203ENST00000409783 ATAD5Q96QE3 1844 aa26.88■■□□□ 1.89
PTCD3-203ENST00000409783 SPDYE5A6NIY4 337 aa26.87■■□□□ 1.89
PTCD3-203ENST00000409783 HLA-DOAP06340 250 aa26.87■■□□□ 1.89
PTCD3-203ENST00000409783 ZBTB48P10074 688 aaPredicted RBP26.87■■□□□ 1.89
PTCD3-203ENST00000409783 TTC6Q86TZ1 520 aa26.87■■□□□ 1.89
PTCD3-203ENST00000409783 OPTNQ96CV9 577 aa26.87■■□□□ 1.89
PTCD3-203ENST00000409783 FAM227BQ96M60 508 aa26.87■■□□□ 1.89
PTCD3-203ENST00000409783 PPP4R2Q9NY27 417 aa26.87■■□□□ 1.89
PTCD3-203ENST00000409783 A0A0D9SFI3 127 aa26.86■■□□□ 1.89
PTCD3-203ENST00000409783 SDSP20132 328 aa26.86■■□□□ 1.89
PTCD3-203ENST00000409783 MKRN3Q13064 507 aaKnown RBP26.86■■□□□ 1.89
PTCD3-203ENST00000409783 HELLSQ9NRZ9 838 aa26.86■■□□□ 1.89
PTCD3-203ENST00000409783 WBP1LQ9NX94 342 aa26.86■■□□□ 1.89
PTCD3-203ENST00000409783 PHIPQ8WWQ0 1821 aa26.86■■□□□ 1.89
PTCD3-203ENST00000409783 FOXP2O15409 715 aa26.85■■□□□ 1.89
PTCD3-203ENST00000409783 CTNND1O60716 968 aaKnown RBP26.85■■□□□ 1.89
PTCD3-203ENST00000409783 CYP2D6P10635 497 aa26.85■■□□□ 1.89
PTCD3-203ENST00000409783 GABPAQ06546 454 aa26.85■■□□□ 1.89
PTCD3-203ENST00000409783 NMIQ13287 307 aaPredicted RBP26.85■■□□□ 1.89
PTCD3-203ENST00000409783 CCDC129Q6ZRS4 1044 aa26.85■■□□□ 1.89
PTCD3-203ENST00000409783 ERO1BQ86YB8 467 aa26.85■■□□□ 1.89
PTCD3-203ENST00000409783 SCYL3Q8IZE3 742 aa26.85■■□□□ 1.89
PTCD3-203ENST00000409783 EPB41L4AQ9HCS5 686 aaPredicted RBP26.85■■□□□ 1.89
PTCD3-203ENST00000409783 SERPINB13Q9UIV8 391 aa26.85■■□□□ 1.89
PTCD3-203ENST00000409783 SMIM22K7EJ46 135 aa26.84■■□□□ 1.89
PTCD3-203ENST00000409783 POLR3DP05423 398 aaPredicted RBP26.84■■□□□ 1.89
PTCD3-203ENST00000409783 GNAT2P19087 354 aa26.84■■□□□ 1.89
PTCD3-203ENST00000409783 GIMAP6Q6P9H5 292 aa26.84■■□□□ 1.89
PTCD3-203ENST00000409783 USP17L12C9JPN9 530 aa26.83■■□□□ 1.89
PTCD3-203ENST00000409783 USP17L21D6R901 530 aa26.83■■□□□ 1.89
PTCD3-203ENST00000409783 C12orf60Q5U649 245 aa26.83■■□□□ 1.89
PTCD3-203ENST00000409783 CTR9Q6PD62 1173 aa26.83■■□□□ 1.89
PTCD3-203ENST00000409783 CRACR2BQ8N4Y2 399 aaPredicted RBP26.83■■□□□ 1.89
PTCD3-203ENST00000409783 OTUD5Q96G74 571 aa26.83■■□□□ 1.89
PTCD3-203ENST00000409783 CYP2D7A0A087X1C5 515 aa26.82■■□□□ 1.88
PTCD3-203ENST00000409783 PATL2C9JE40 543 aaKnown RBP26.82■■□□□ 1.88
PTCD3-203ENST00000409783 CAP2P40123 477 aa26.82■■□□□ 1.88
PTCD3-203ENST00000409783 JAG1P78504 1218 aa26.82■■□□□ 1.88
PTCD3-203ENST00000409783 MAP2K1Q02750 393 aaPredicted RBP26.82■■□□□ 1.88
PTCD3-203ENST00000409783 MCMDC2Q4G0Z9 681 aa26.82■■□□□ 1.88
PTCD3-203ENST00000409783 TATDN1Q6P1N9 297 aa26.82■■□□□ 1.88
PTCD3-203ENST00000409783 TM4SF4P48230 202 aa26.81■■□□□ 1.88
PTCD3-203ENST00000409783 PPATQ06203 517 aa26.81■■□□□ 1.88
PTCD3-203ENST00000409783 PPIL2Q13356 520 aa26.81■■□□□ 1.88
PTCD3-203ENST00000409783 SBK1Q52WX2 424 aa26.81■■□□□ 1.88
PTCD3-203ENST00000409783 MS4A4AQ96JQ5 239 aa26.81■■□□□ 1.88
PTCD3-203ENST00000409783 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.81■■□□□ 1.88
PTCD3-203ENST00000409783 HSPA1AP0DMV8 641 aaKnown RBP26.8■■□□□ 1.88
PTCD3-203ENST00000409783 HSPA1BP0DMV9 641 aaKnown RBP26.8■■□□□ 1.88
PTCD3-203ENST00000409783 PTPRAP18433 802 aa26.8■■□□□ 1.88
PTCD3-203ENST00000409783 SHMT1P34896 483 aa26.8■■□□□ 1.88
PTCD3-203ENST00000409783 ZNF589Q86UQ0 364 aaPredicted RBP26.8■■□□□ 1.88
PTCD3-203ENST00000409783 REM2Q8IYK8 340 aaPredicted RBP26.8■■□□□ 1.88
PTCD3-203ENST00000409783 IFNL3Q8IZI9 196 aa26.8■■□□□ 1.88
PTCD3-203ENST00000409783 TESPA1A2RU30 521 aaPredicted RBP26.79■■□□□ 1.88
PTCD3-203ENST00000409783 IRF6O14896 467 aa26.79■■□□□ 1.88
PTCD3-203ENST00000409783 SHROOM1Q2M3G4 852 aaPredicted RBP26.79■■□□□ 1.88
PTCD3-203ENST00000409783 VPS53Q5VIR6 699 aa26.79■■□□□ 1.88
PTCD3-203ENST00000409783 DYNLL2Q96FJ2 89 aa26.79■■□□□ 1.88
PTCD3-203ENST00000409783 DDRGK1Q96HY6 314 aa26.79■■□□□ 1.88
PTCD3-203ENST00000409783 TRIM34Q9BYJ4 488 aa26.79■■□□□ 1.88
PTCD3-203ENST00000409783 ARPP21Q9UBL0 812 aaPredicted RBP26.79■■□□□ 1.88
PTCD3-203ENST00000409783 PTPRFP10586 1907 aa26.78■■□□□ 1.88
PTCD3-203ENST00000409783 MYH8P13535 1937 aa26.78■■□□□ 1.88
PTCD3-203ENST00000409783 MANSC4A6NHS7 340 aaPredicted RBP26.78■■□□□ 1.88
PTCD3-203ENST00000409783 HIP1O00291 1037 aa26.78■■□□□ 1.88
PTCD3-203ENST00000409783 CCDC84Q86UT8 332 aaPredicted RBP26.78■■□□□ 1.88
PTCD3-203ENST00000409783 PICK1Q9NRD5 415 aa26.78■■□□□ 1.88
PTCD3-203ENST00000409783 TAOK2Q9UL54 1235 aa26.78■■□□□ 1.88
PTCD3-203ENST00000409783 KCNH4Q9UQ05 1017 aa26.78■■□□□ 1.88
PTCD3-203ENST00000409783 SLC44A5Q8NCS7 719 aa26.77■■□□□ 1.88
PTCD3-203ENST00000409783 DIAPH3Q9NSV4 1193 aa26.77■■□□□ 1.88
PTCD3-203ENST00000409783 CCDC171Q6TFL3 1326 aa26.76■■□□□ 1.87
PTCD3-203ENST00000409783 GDF11O95390 407 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms