RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 ZKSCAN3Q9BRR0 538 aa20.45■□□□□ 0.86
CDK11A-208ENST00000404249 PCDHA5Q9Y5H7 936 aa20.45■□□□□ 0.86
CDK11A-208ENST00000404249 MYO1BO43795 1136 aa20.45■□□□□ 0.86
CDK11A-208ENST00000404249 TOB1P50616 345 aaPredicted RBP20.45■□□□□ 0.86
CDK11A-208ENST00000404249 DMTNQ08495 405 aa20.45■□□□□ 0.86
CDK11A-208ENST00000404249 CFAP100Q494V2 611 aa20.45■□□□□ 0.86
CDK11A-208ENST00000404249 FOXP4Q8IVH2 680 aaPredicted RBP20.45■□□□□ 0.86
CDK11A-208ENST00000404249 KCNJ14Q9UNX9 436 aa20.45■□□□□ 0.86
CDK11A-208ENST00000404249 ELOA2Q8IYF1 753 aaPredicted RBP20.44■□□□□ 0.86
CDK11A-208ENST00000404249 OGFRQ9NZT2 677 aa20.44■□□□□ 0.86
CDK11A-208ENST00000404249 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.44■□□□□ 0.86
CDK11A-208ENST00000404249 V9GYY5 206 aaPredicted RBP20.44■□□□□ 0.86
CDK11A-208ENST00000404249 SPECC1Q5M775 1068 aa20.44■□□□□ 0.86
CDK11A-208ENST00000404249 FOXP1Q9H334 677 aaPredicted RBP20.44■□□□□ 0.86
CDK11A-208ENST00000404249 ERICH2A1L162 156 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 FOXN1O15353 648 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 BCAMP50895 628 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 VSTM4Q8IW00 320 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 ZNF397Q8NF99 534 aaPredicted RBP20.43■□□□□ 0.86
CDK11A-208ENST00000404249 HOOK1Q9UJC3 728 aaKnown RBP20.43■□□□□ 0.86
CDK11A-208ENST00000404249 FBXO2Q9UK22 296 aaPredicted RBP20.43■□□□□ 0.86
CDK11A-208ENST00000404249 DEXIO95424 95 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 EIF5P55010 431 aaKnown RBP20.43■□□□□ 0.86
CDK11A-208ENST00000404249 MDM2Q00987 491 aaPredicted RBP20.43■□□□□ 0.86
CDK11A-208ENST00000404249 RILPL1Q5EBL4 403 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 UTP14CQ5TAP6 766 aaKnown RBP20.43■□□□□ 0.86
CDK11A-208ENST00000404249 SYT10Q6XYQ8 523 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 MTA3Q9BTC8 594 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
CDK11A-208ENST00000404249 FANCLQ9NW38 375 aa20.43■□□□□ 0.86
CDK11A-208ENST00000404249 EXOC5O00471 708 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 BMP6P22004 513 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 PTPREP23469 700 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 ELF2Q15723 593 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 L2HGDHQ9H9P8 463 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 CCP110O43303 1012 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 TUBB4AP04350 444 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 GRIN1Q05586 938 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 PDE4BQ07343 736 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 CRACR2BQ8N4Y2 399 aaPredicted RBP20.42■□□□□ 0.86
CDK11A-208ENST00000404249 MIGA1Q8NAN2 632 aa20.42■□□□□ 0.86
CDK11A-208ENST00000404249 DDX41Q9UJV9 622 aaKnown RBP20.42■□□□□ 0.86
CDK11A-208ENST00000404249 CCDC196A0A1B0GTZ2 297 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 TMEM232C9JQI7 657 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
CDK11A-208ENST00000404249 POSTNQ15063 836 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 CCDC152Q4G0S7 254 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 ZNF654Q8IZM8 581 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 CCDC82Q8N4S0 544 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 RNF41Q9H4P4 317 aaPredicted RBP20.41■□□□□ 0.86
CDK11A-208ENST00000404249 MAN1B1Q9UKM7 699 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
CDK11A-208ENST00000404249 RCAN1P53805 252 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 CMTR1Q8N1G2 835 aaKnown RBP20.41■□□□□ 0.86
CDK11A-208ENST00000404249 TMTC2Q8N394 836 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 LRP2BPQ9P2M1 347 aa20.41■□□□□ 0.86
CDK11A-208ENST00000404249 PPARAQ07869 468 aa20.4■□□□□ 0.86
CDK11A-208ENST00000404249 NR5A1Q13285 461 aa20.4■□□□□ 0.86
CDK11A-208ENST00000404249 KMT5BQ4FZB7 885 aa20.4■□□□□ 0.86
CDK11A-208ENST00000404249 TMX1Q9H3N1 280 aa20.4■□□□□ 0.86
CDK11A-208ENST00000404249 CCDC87Q9NVE4 849 aa20.4■□□□□ 0.86
CDK11A-208ENST00000404249 PCDHB6Q9Y5E3 794 aa20.4■□□□□ 0.86
CDK11A-208ENST00000404249 RTL9Q8NET4 1388 aa20.4■□□□□ 0.86
CDK11A-208ENST00000404249 RREB1Q92766 1687 aa20.4■□□□□ 0.86
CDK11A-208ENST00000404249 PRR29P0C7W0 189 aa20.39■□□□□ 0.86
CDK11A-208ENST00000404249 INTS5Q6P9B9 1019 aaKnown RBP20.39■□□□□ 0.86
CDK11A-208ENST00000404249 NUP133Q8WUM0 1156 aa20.39■□□□□ 0.86
CDK11A-208ENST00000404249 SERTAD1Q9UHV2 236 aa20.39■□□□□ 0.86
CDK11A-208ENST00000404249 BCL9LQ86UU0 1499 aa20.39■□□□□ 0.86
CDK11A-208ENST00000404249 POLR2DO15514 142 aaKnown RBP20.39■□□□□ 0.85
CDK11A-208ENST00000404249 HOMER1Q86YM7 354 aa20.39■□□□□ 0.85
CDK11A-208ENST00000404249 FANCBQ8NB91 859 aa20.39■□□□□ 0.85
CDK11A-208ENST00000404249 UBAC1Q9BSL1 405 aa20.39■□□□□ 0.85
CDK11A-208ENST00000404249 GTPBP4Q9BZE4 634 aaKnown RBP20.39■□□□□ 0.85
CDK11A-208ENST00000404249 INTS13Q9NVM9 706 aa20.39■□□□□ 0.85
CDK11A-208ENST00000404249 CICQ96RK0 1608 aaPredicted RBP20.39■□□□□ 0.85
CDK11A-208ENST00000404249 A0A1B0GUL6 1792 aa20.39■□□□□ 0.85
CDK11A-208ENST00000404249 PARP10Q53GL7 1025 aa20.38■□□□□ 0.85
CDK11A-208ENST00000404249 NT5DC1Q5TFE4 455 aa20.38■□□□□ 0.85
CDK11A-208ENST00000404249 ZNF579Q8NAF0 562 aaKnown RBP20.38■□□□□ 0.85
CDK11A-208ENST00000404249 CCDC93Q567U6 631 aa20.38■□□□□ 0.85
CDK11A-208ENST00000404249 FBXO38Q6PIJ6 1188 aa20.38■□□□□ 0.85
CDK11A-208ENST00000404249 OXER1Q8TDS5 423 aa20.38■□□□□ 0.85
CDK11A-208ENST00000404249 CEP131Q9UPN4 1083 aa20.38■□□□□ 0.85
CDK11A-208ENST00000404249 COL16A1Q07092 1604 aaPredicted RBP20.37■□□□□ 0.85
CDK11A-208ENST00000404249 PHLPP2Q6ZVD8 1323 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 CAMTA2O94983 1202 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 CYP7A1P22680 504 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 CRKLP46109 303 aaKnown RBP20.37■□□□□ 0.85
CDK11A-208ENST00000404249 CHRNDQ07001 517 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 GOLGA8FQ08AF8 430 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 GOLGA8DPQ0D2H9 430 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 PTPN21Q16825 1174 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 SMARCE1Q969G3 411 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 DACH1Q9UI36 760 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 SRPRBQ9Y5M8 271 aaKnown RBP20.37■□□□□ 0.85
CDK11A-208ENST00000404249 COL4A1P02462 1669 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 DUOX1Q9NRD9 1551 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 TNKSO95271 1327 aa20.37■□□□□ 0.85
CDK11A-208ENST00000404249 NTSR2O95665 410 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms