RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 PDXDC2PQ6P474 469 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 CFAP161Q6P656 301 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 METTL3Q86U44 580 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 GTF3C2Q8WUA4 911 aaPredicted RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 NELL1Q92832 810 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 KHSRPQ92945 711 aaKnown RBP eCLIP4.64□□□□□ -1.671e-6■■□□□ 13.8
CLHC1-201ENST00000401408 TBC1D31Q96DN5 1066 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZNF496Q96IT1 587 aaPredicted RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 IWS1Q96ST2 819 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 TRIM55Q9BYV6 548 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ATP10DQ9P241 1426 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 LRRC37A3O60309 1634 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ABCC11Q96J66 1382 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 WNK3Q9BYP7 1800 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 HOXC13P31276 330 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SARSP49591 514 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 RAB27AP51159 221 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SATB1Q01826 763 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 MCL1Q07820 350 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 RASA3Q14644 834 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 TSHZ3Q63HK5 1081 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 PPP4R3AQ6IN85 833 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZCCHC8Q6NZY4 707 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 RASSF3Q86WH2 238 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ANKMY2Q8IV38 441 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 CLASRPQ8N2M8 674 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ITFG2Q969R8 447 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 TBC1D20Q96BZ9 403 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SCLT1Q96NL6 688 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 CENPOQ9BU64 300 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 XPO4Q9C0E2 1151 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SUDS3Q9H7L9 328 aaPredicted RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZNF408Q9H9D4 720 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZIM2Q9NZV7 527 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 CHIC2Q9UKJ5 165 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 RABL2BQ9UNT1 228 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 PCDHB15Q9Y5E8 787 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 PLEKHH1Q9ULM0 1364 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 GTPBP10A4D1E9 387 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 G3V3G9 751 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 TREHO43280 583 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 PIP5K1CO60331 668 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 SKIP12755 728 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 HALP42357 657 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 TRIM29Q14134 588 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 HSP90B2PQ58FF3 399 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 WDR45BQ5MNZ6 344 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 RC3H1Q5TC82 1133 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 IL31Q6EBC2 164 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 KLHL10Q6JEL2 608 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 C16orf54Q6UWD8 224 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 MMS22LQ6ZRQ5 1243 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 PTF1AQ7RTS3 328 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 ZNF354CQ86Y25 554 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 STK11IPQ8N1F8 1099 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 ARL6IP6Q8N6S5 226 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 SMARCC1Q92922 1105 aaPredicted RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 CENPTQ96BT3 561 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 NUDT16Q96DE0 195 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 BORCS6Q96GS4 357 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 FEZ1Q99689 392 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 SRA1Q9HD15 236 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 SH3GLB2Q9NR46 395 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 DNMT3AQ9Y6K1 912 aaPredicted RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 ARHGEF28Q8N1W1 1705 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 A6NCN8 305 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 C11orf95C9JLR9 678 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 SNX2O60749 519 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 SSBP05455 408 aaKnown RBP eCLIP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 NBPF7P0C2Y1 421 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 VARSP26640 1264 aaKnown RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 ADD2P35612 726 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 GJA8P48165 433 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 CD151P48509 253 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 ST13P50502 369 aaKnown RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 NEK3P51956 506 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 EIF4G2P78344 907 aaKnown RBP eCLIP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 FKBP4Q02790 459 aaKnown RBP eCLIP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 PDE1CQ14123 709 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 DSG2Q14126 1118 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 TKFCQ3LXA3 575 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 CCDC158Q5M9N0 1113 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 JAKMIP3Q5VZ66 844 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 C16orf87Q6PH81 154 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 KRT26Q7Z3Y9 468 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 MAATS1Q7Z4T9 603 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 WAPLQ7Z5K2 1190 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 ARHGEF25Q86VW2 580 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 IFNL2Q8IZJ0 200 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 LILRB2Q8N423 598 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 ENAHQ8N8S7 591 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 FLCNQ8NFG4 579 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 RNF217Q8TC41 542 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 VMP1Q96GC9 406 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 FAM210AQ96ND0 272 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 C2orf49Q9BVC5 232 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 YY1AP1Q9H869 796 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 TUBGCP6Q96RT7 1819 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 OVOS2A0A0G2JMS6 1433 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 OVOS2A0A0J9YW53 1432 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms