RNA–Protein interactions for RNA: ENST00000398647.7

FAM3B-203, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM3B, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-203ENST00000398647 SLURP2P0DP57 97 aa17.26■□□□□ 0.35
FAM3B-203ENST00000398647 KLHDC4Q8TBB5 520 aa17.26■□□□□ 0.35
FAM3B-203ENST00000398647 SOCS4Q8WXH5 440 aa17.26■□□□□ 0.35
FAM3B-203ENST00000398647 LPIN2Q92539 896 aa17.26■□□□□ 0.35
FAM3B-203ENST00000398647 SYMPKQ92797 1274 aaKnown RBP17.26■□□□□ 0.35
FAM3B-203ENST00000398647 MORF4L1Q9UBU8 362 aa17.26■□□□□ 0.35
FAM3B-203ENST00000398647 PRUNE2Q8WUY3 3088 aa17.26■□□□□ 0.35
FAM3B-203ENST00000398647 GAKO14976 1311 aa17.25■□□□□ 0.35
FAM3B-203ENST00000398647 EXOSC9Q06265 439 aaKnown RBP17.25■□□□□ 0.35
FAM3B-203ENST00000398647 SPP2Q13103 211 aa17.25■□□□□ 0.35
FAM3B-203ENST00000398647 LHX8Q68G74 356 aa17.25■□□□□ 0.35
FAM3B-203ENST00000398647 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
FAM3B-203ENST00000398647 NUDT12Q9BQG2 462 aa17.25■□□□□ 0.35
FAM3B-203ENST00000398647 ASCC2Q9H1I8 757 aaPredicted RBP17.25■□□□□ 0.35
FAM3B-203ENST00000398647 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
FAM3B-203ENST00000398647 COL9A1P20849 921 aa17.24■□□□□ 0.35
FAM3B-203ENST00000398647 HMGCS2P54868 508 aa17.24■□□□□ 0.35
FAM3B-203ENST00000398647 CACNB2Q08289 660 aaPredicted RBP17.24■□□□□ 0.35
FAM3B-203ENST00000398647 ZNF280CQ8ND82 737 aa17.24■□□□□ 0.35
FAM3B-203ENST00000398647 TBC1D2Q9BYX2 928 aa17.24■□□□□ 0.35
FAM3B-203ENST00000398647 CDH23Q9H251 3354 aa17.24■□□□□ 0.35
FAM3B-203ENST00000398647 TBC1D12O60347 775 aa17.23■□□□□ 0.35
FAM3B-203ENST00000398647 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
FAM3B-203ENST00000398647 SEMA6BQ9H3T3 888 aa17.23■□□□□ 0.35
FAM3B-203ENST00000398647 DDX4Q9NQI0 724 aaKnown RBP17.23■□□□□ 0.35
FAM3B-203ENST00000398647 RLFQ13129 1914 aa17.23■□□□□ 0.35
FAM3B-203ENST00000398647 PICALMQ13492 652 aa17.22■□□□□ 0.35
FAM3B-203ENST00000398647 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
FAM3B-203ENST00000398647 OSBPL5Q9H0X9 879 aaPredicted RBP17.22■□□□□ 0.35
FAM3B-203ENST00000398647 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
FAM3B-203ENST00000398647 EYA2O00167 538 aa17.21■□□□□ 0.35
FAM3B-203ENST00000398647 SEMA3EO15041 775 aa17.21■□□□□ 0.35
FAM3B-203ENST00000398647 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
FAM3B-203ENST00000398647 SH3D19Q5HYK7 790 aa17.21■□□□□ 0.35
FAM3B-203ENST00000398647 MYLIPQ8WY64 445 aa17.21■□□□□ 0.35
FAM3B-203ENST00000398647 PRKAG2Q9UGJ0 569 aa17.21■□□□□ 0.35
FAM3B-203ENST00000398647 DENND2AQ9ULE3 1009 aa17.21■□□□□ 0.35
FAM3B-203ENST00000398647 MUC3AQ02505 3323 aa17.21■□□□□ 0.34
FAM3B-203ENST00000398647 FAM196BA6NMK8 535 aa17.2■□□□□ 0.34
FAM3B-203ENST00000398647 FOSL2P15408 326 aa17.2■□□□□ 0.34
FAM3B-203ENST00000398647 IRX3P78415 501 aaPredicted RBP17.2■□□□□ 0.34
FAM3B-203ENST00000398647 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
FAM3B-203ENST00000398647 GPRC5AQ8NFJ5 357 aa17.2■□□□□ 0.34
FAM3B-203ENST00000398647 USP6NLQ92738 828 aa17.2■□□□□ 0.34
FAM3B-203ENST00000398647 SENP6Q9GZR1 1112 aaPredicted RBP17.2■□□□□ 0.34
FAM3B-203ENST00000398647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.34
FAM3B-203ENST00000398647 DNAH12Q6ZR08 3092 aa17.19■□□□□ 0.34
FAM3B-203ENST00000398647 MAPK4P31152 587 aa17.19■□□□□ 0.34
FAM3B-203ENST00000398647 RGS2P41220 211 aa17.19■□□□□ 0.34
FAM3B-203ENST00000398647 BTDP43251 543 aa17.19■□□□□ 0.34
FAM3B-203ENST00000398647 CCL14Q16627 93 aa17.19■□□□□ 0.34
FAM3B-203ENST00000398647 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
FAM3B-203ENST00000398647 SLF2Q8IX21 1173 aa17.19■□□□□ 0.34
FAM3B-203ENST00000398647 APBA2Q99767 749 aa17.19■□□□□ 0.34
FAM3B-203ENST00000398647 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
FAM3B-203ENST00000398647 TXNRD2Q9NNW7 524 aa17.19■□□□□ 0.34
FAM3B-203ENST00000398647 NCOR1O75376 2440 aa17.18■□□□□ 0.34
FAM3B-203ENST00000398647 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
FAM3B-203ENST00000398647 ZBTB22O15209 634 aa17.18■□□□□ 0.34
FAM3B-203ENST00000398647 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
FAM3B-203ENST00000398647 SMAD3P84022 425 aaKnown RBP17.18■□□□□ 0.34
FAM3B-203ENST00000398647 SHHQ15465 462 aa17.18■□□□□ 0.34
FAM3B-203ENST00000398647 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
FAM3B-203ENST00000398647 FAM163AQ96GL9 167 aaPredicted RBP17.18■□□□□ 0.34
FAM3B-203ENST00000398647 AS3MTQ9HBK9 375 aa17.18■□□□□ 0.34
FAM3B-203ENST00000398647 SIPA1L1O43166 1804 aa17.17■□□□□ 0.34
FAM3B-203ENST00000398647 TNFRSF10AO00220 468 aa17.17■□□□□ 0.34
FAM3B-203ENST00000398647 PEX10O60683 326 aa17.17■□□□□ 0.34
FAM3B-203ENST00000398647 HOXA7P31268 230 aaPredicted RBP17.17■□□□□ 0.34
FAM3B-203ENST00000398647 CAP2P40123 477 aa17.17■□□□□ 0.34
FAM3B-203ENST00000398647 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
FAM3B-203ENST00000398647 HERVK_113P62684 666 aa17.17■□□□□ 0.34
FAM3B-203ENST00000398647 TJAP1Q5JTD0 557 aa17.17■□□□□ 0.34
FAM3B-203ENST00000398647 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
FAM3B-203ENST00000398647 P2RX7Q99572 595 aaKnown RBP17.17■□□□□ 0.34
FAM3B-203ENST00000398647 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
FAM3B-203ENST00000398647 PHKA1P46020 1223 aa17.16■□□□□ 0.34
FAM3B-203ENST00000398647 ATN1P54259 1190 aaPredicted RBP17.16■□□□□ 0.34
FAM3B-203ENST00000398647 RTP1P59025 263 aa17.16■□□□□ 0.34
FAM3B-203ENST00000398647 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
FAM3B-203ENST00000398647 MORN1Q5T089 497 aa17.16■□□□□ 0.34
FAM3B-203ENST00000398647 ATG9AQ7Z3C6 839 aa17.16■□□□□ 0.34
FAM3B-203ENST00000398647 GPR142Q7Z601 462 aa17.16■□□□□ 0.34
FAM3B-203ENST00000398647 CCAR1Q8IX12 1150 aaKnown RBP17.16■□□□□ 0.34
FAM3B-203ENST00000398647 DNM1LO00429 736 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 RHBDL3P58872 404 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 MTMR2Q13614 643 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 RRP1BQ14684 758 aaKnown RBP17.15■□□□□ 0.34
FAM3B-203ENST00000398647 PLEKHH3Q7Z736 793 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 WDR18Q9BV38 432 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 PORCNQ9H237 461 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 TMOD4Q9NZQ9 345 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 ABCF2Q9UG63 623 aa17.15■□□□□ 0.34
FAM3B-203ENST00000398647 TMEM265A0A087WTH1 108 aa17.14■□□□□ 0.33
FAM3B-203ENST00000398647 GPR75-ASB3A0A0A6YYF3 556 aa17.14■□□□□ 0.33
FAM3B-203ENST00000398647 MSCO60682 206 aa17.14■□□□□ 0.33
FAM3B-203ENST00000398647 BACE1P56817 501 aa17.14■□□□□ 0.33
FAM3B-203ENST00000398647 ERVK-9P63128 1117 aa17.14■□□□□ 0.33
FAM3B-203ENST00000398647 ERVK-24P63145 666 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms