RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 MAP2K1Q02750 393 aaPredicted RBP21.4■■□□□ 1.02
TNFSF13-204ENST00000396542 ZMYM1Q5SVZ6 1142 aa21.4■■□□□ 1.02
TNFSF13-204ENST00000396542 FOXP4Q8IVH2 680 aaPredicted RBP21.4■■□□□ 1.02
TNFSF13-204ENST00000396542 STRBPQ96SI9 672 aaKnown RBP21.4■■□□□ 1.02
TNFSF13-204ENST00000396542 ATP8A2Q9NTI2 1148 aa21.4■■□□□ 1.02
TNFSF13-204ENST00000396542 WBP1LQ9NX94 342 aa21.4■■□□□ 1.02
TNFSF13-204ENST00000396542 SPDYE5A6NIY4 337 aa21.39■■□□□ 1.01
TNFSF13-204ENST00000396542 FAM196BA6NMK8 535 aa21.39■■□□□ 1.01
TNFSF13-204ENST00000396542 M0R2C6 588 aa21.39■■□□□ 1.01
TNFSF13-204ENST00000396542 GJA5P36382 358 aa21.39■■□□□ 1.01
TNFSF13-204ENST00000396542 OPTNQ96CV9 577 aa21.39■■□□□ 1.01
TNFSF13-204ENST00000396542 EHD4Q9H223 541 aa21.39■■□□□ 1.01
TNFSF13-204ENST00000396542 DNAJC18Q9H819 358 aa21.39■■□□□ 1.01
TNFSF13-204ENST00000396542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.39■■□□□ 1.01
TNFSF13-204ENST00000396542 TRIM6-TRIM34B2RNG4 842 aa21.38■■□□□ 1.01
TNFSF13-204ENST00000396542 GPAA1O43292 621 aa21.38■■□□□ 1.01
TNFSF13-204ENST00000396542 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
TNFSF13-204ENST00000396542 REM2Q8IYK8 340 aaPredicted RBP21.38■■□□□ 1.01
TNFSF13-204ENST00000396542 PHIPQ8WWQ0 1821 aa21.38■■□□□ 1.01
TNFSF13-204ENST00000396542 CTNND1O60716 968 aaKnown RBP21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 TTC6Q86TZ1 520 aa21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 ERO1BQ86YB8 467 aa21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 SCYL3Q8IZE3 742 aa21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 CNKSR2Q8WXI2 1034 aa21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 CCDC136Q96JN2 1154 aa21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 SEC62Q99442 399 aaKnown RBP21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 MCM9Q9NXL9 1143 aa21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 SLC4A4Q9Y6R1 1079 aa21.37■■□□□ 1.01
TNFSF13-204ENST00000396542 MKRN3Q13064 507 aaKnown RBP21.36■■□□□ 1.01
TNFSF13-204ENST00000396542 TTC22Q5TAA0 569 aa21.36■■□□□ 1.01
TNFSF13-204ENST00000396542 RILPL2Q969X0 211 aa21.36■■□□□ 1.01
TNFSF13-204ENST00000396542 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.36■■□□□ 1.01
TNFSF13-204ENST00000396542 GSG1L2A8MUP6 293 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 HSPA1AP0DMV8 641 aaKnown RBP21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 HSPA1BP0DMV9 641 aaKnown RBP21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 GSPT1P15170 499 aaKnown RBP21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 GNAT2P19087 354 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 TM4SF4P48230 202 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 PLCD1P51178 756 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 PPATQ06203 517 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 RRP1BQ14684 758 aaKnown RBP21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 SLC4A8Q2Y0W8 1093 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 GIMAP6Q6P9H5 292 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 CRACR2BQ8N4Y2 399 aaPredicted RBP21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 OTUD5Q96G74 571 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 SERPINB13Q9UIV8 391 aa21.35■■□□□ 1.01
TNFSF13-204ENST00000396542 MANSC4A6NHS7 340 aaPredicted RBP21.34■■□□□ 1.01
TNFSF13-204ENST00000396542 POLR3DP05423 398 aaPredicted RBP21.34■■□□□ 1.01
TNFSF13-204ENST00000396542 GABPAQ06546 454 aa21.34■■□□□ 1.01
TNFSF13-204ENST00000396542 PPIL2Q13356 520 aa21.34■■□□□ 1.01
TNFSF13-204ENST00000396542 TATDN1Q6P1N9 297 aa21.34■■□□□ 1.01
TNFSF13-204ENST00000396542 HELLSQ9NRZ9 838 aa21.34■■□□□ 1.01
TNFSF13-204ENST00000396542 TAOK2Q9UL54 1235 aa21.34■■□□□ 1.01
TNFSF13-204ENST00000396542 TESPA1A2RU30 521 aaPredicted RBP21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 SDSP20132 328 aa21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 CAP2P40123 477 aa21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 INHBEP58166 350 aa21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 EVX2Q03828 476 aa21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 SREBF2Q12772 1141 aa21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 DDRGK1Q96HY6 314 aa21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 MS4A4AQ96JQ5 239 aa21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 FAM227BQ96M60 508 aa21.33■■□□□ 1.01
TNFSF13-204ENST00000396542 MYH8P13535 1937 aa21.33■■□□□ 1
TNFSF13-204ENST00000396542 PTPRFP10586 1907 aa21.32■■□□□ 1
TNFSF13-204ENST00000396542 A0A0D9SFI3 127 aa21.32■■□□□ 1
TNFSF13-204ENST00000396542 IRF6O14896 467 aa21.32■■□□□ 1
TNFSF13-204ENST00000396542 CYP2D6P10635 497 aa21.32■■□□□ 1
TNFSF13-204ENST00000396542 PTPRAP18433 802 aa21.32■■□□□ 1
TNFSF13-204ENST00000396542 C12orf60Q5U649 245 aa21.32■■□□□ 1
TNFSF13-204ENST00000396542 TRIM34Q9BYJ4 488 aa21.32■■□□□ 1
TNFSF13-204ENST00000396542 EPB41L4AQ9HCS5 686 aaPredicted RBP21.32■■□□□ 1
TNFSF13-204ENST00000396542 PICK1Q9NRD5 415 aa21.32■■□□□ 1
TNFSF13-204ENST00000396542 PATL2C9JE40 543 aaKnown RBP21.31■■□□□ 1
TNFSF13-204ENST00000396542 USP17L12C9JPN9 530 aa21.31■■□□□ 1
TNFSF13-204ENST00000396542 USP17L21D6R901 530 aa21.31■■□□□ 1
TNFSF13-204ENST00000396542 NMIQ13287 307 aaPredicted RBP21.31■■□□□ 1
TNFSF13-204ENST00000396542 SBK1Q52WX2 424 aa21.31■■□□□ 1
TNFSF13-204ENST00000396542 CTR9Q6PD62 1173 aa21.31■■□□□ 1
TNFSF13-204ENST00000396542 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
TNFSF13-204ENST00000396542 KCNH4Q9UQ05 1017 aa21.31■■□□□ 1
TNFSF13-204ENST00000396542 FOXN1O15353 648 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 FOXP2O15409 715 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 CA12O43570 354 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 SHMT1P34896 483 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 GTF2A2P52657 109 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 MCMDC2Q4G0Z9 681 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 CCDC129Q6ZRS4 1044 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 BEGAINQ9BUH8 593 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 GINM1Q9NU53 330 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 SAGE1Q9NXZ1 904 aa21.3■■□□□ 1
TNFSF13-204ENST00000396542 CYP2D7A0A087X1C5 515 aa21.29■■□□□ 1
TNFSF13-204ENST00000396542 HIP1O00291 1037 aa21.29■■□□□ 1
TNFSF13-204ENST00000396542 JAG1P78504 1218 aa21.29■■□□□ 1
TNFSF13-204ENST00000396542 AMOTL1Q8IY63 956 aa21.29■■□□□ 1
TNFSF13-204ENST00000396542 IFNL3Q8IZI9 196 aa21.29■■□□□ 1
TNFSF13-204ENST00000396542 RNF186Q9NXI6 227 aa21.29■■□□□ 1
TNFSF13-204ENST00000396542 PPP4R2Q9NY27 417 aa21.29■■□□□ 1
TNFSF13-204ENST00000396542 AFG3L2Q9Y4W6 797 aa21.29■■□□□ 1
TNFSF13-204ENST00000396542 ROBO3Q96MS0 1386 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms