RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PRIMPOLQ96LW4 560 aa17.85■□□□□ 0.45
CPSF7-202ENST00000394888 MTA3Q9BTC8 594 aa17.85■□□□□ 0.45
CPSF7-202ENST00000394888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.85■□□□□ 0.45
CPSF7-202ENST00000394888 BTBD18B2RXH4 712 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 ZBTB22O15209 634 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 CTIFO43310 598 aaKnown RBP17.84■□□□□ 0.45
CPSF7-202ENST00000394888 TPM3P06753 285 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
CPSF7-202ENST00000394888 CHMP4CQ96CF2 233 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 ANO10Q9NW15 660 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 KCNJ14Q9UNX9 436 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 FAM205CA6NFA0 338 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 CPLX1O14810 134 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 TRDNQ13061 729 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 LONRF3Q496Y0 759 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 IFIT3O14879 490 aaKnown RBP17.84■□□□□ 0.45
CPSF7-202ENST00000394888 RGL2O15211 777 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 GNAT2P19087 354 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 NLRP12P59046 1061 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 CNNM2Q9H8M5 875 aa17.84■□□□□ 0.45
CPSF7-202ENST00000394888 IGHMBP2P38935 993 aaKnown RBP17.83■□□□□ 0.45
CPSF7-202ENST00000394888 PDE4BQ07343 736 aa17.83■□□□□ 0.45
CPSF7-202ENST00000394888 NOM1Q5C9Z4 860 aaKnown RBP17.83■□□□□ 0.45
CPSF7-202ENST00000394888 SRP68Q9UHB9 627 aaKnown RBP17.83■□□□□ 0.45
CPSF7-202ENST00000394888 IARSP41252 1262 aaKnown RBP17.83■□□□□ 0.44
CPSF7-202ENST00000394888 NR5A1Q13285 461 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 UBE4AQ14139 1066 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 MFSD6Q6ZSS7 791 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 NYAP1Q6ZVC0 841 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 NOSTRINQ8IVI9 506 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 NSUN4Q96CB9 384 aaKnown RBP17.83■□□□□ 0.44
CPSF7-202ENST00000394888 SLC26A6Q9BXS9 759 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 KRT23Q9C075 422 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 INTS13Q9NVM9 706 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 RCAN1P53805 252 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 CTR9Q6PD62 1173 aa17.83■□□□□ 0.44
CPSF7-202ENST00000394888 OSBPL5Q9H0X9 879 aaPredicted RBP17.83■□□□□ 0.44
CPSF7-202ENST00000394888 PDS5AQ29RF7 1337 aaKnown RBP17.82■□□□□ 0.44
CPSF7-202ENST00000394888 A0A087X0B3 334 aa17.82■□□□□ 0.44
CPSF7-202ENST00000394888 ARMCX5Q6P1M9 558 aa17.82■□□□□ 0.44
CPSF7-202ENST00000394888 MKRN1Q9UHC7 482 aaKnown RBP17.82■□□□□ 0.44
CPSF7-202ENST00000394888 ANKRD31Q8N7Z5 1873 aa17.82■□□□□ 0.44
CPSF7-202ENST00000394888 PNOCQ13519 176 aa17.82■□□□□ 0.44
CPSF7-202ENST00000394888 RIOK3O14730 519 aaKnown RBP17.82■□□□□ 0.44
CPSF7-202ENST00000394888 CYP7A1P22680 504 aa17.82■□□□□ 0.44
CPSF7-202ENST00000394888 ZNF654Q8IZM8 581 aa17.82■□□□□ 0.44
CPSF7-202ENST00000394888 PCDHB6Q9Y5E3 794 aa17.82■□□□□ 0.44
CPSF7-202ENST00000394888 SLC12A7Q9Y666 1083 aa17.82■□□□□ 0.44
CPSF7-202ENST00000394888 TROAPQ12815 778 aa17.81■□□□□ 0.44
CPSF7-202ENST00000394888 FAM98CQ17RN3 349 aaKnown RBP17.81■□□□□ 0.44
CPSF7-202ENST00000394888 NT5DC1Q5TFE4 455 aa17.81■□□□□ 0.44
CPSF7-202ENST00000394888 DPF2Q92785 391 aa17.81■□□□□ 0.44
CPSF7-202ENST00000394888 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
CPSF7-202ENST00000394888 TNKSO95271 1327 aa17.81■□□□□ 0.44
CPSF7-202ENST00000394888 ATP1A3P13637 1013 aa17.81■□□□□ 0.44
CPSF7-202ENST00000394888 VEGFAP15692 232 aaPredicted RBP17.81■□□□□ 0.44
CPSF7-202ENST00000394888 SARSP49591 514 aaKnown RBP17.81■□□□□ 0.44
CPSF7-202ENST00000394888 USP49Q70CQ1 688 aa17.81■□□□□ 0.44
CPSF7-202ENST00000394888 FANCBQ8NB91 859 aa17.81■□□□□ 0.44
CPSF7-202ENST00000394888 MORC2Q9Y6X9 1032 aaPredicted RBP17.81■□□□□ 0.44
CPSF7-202ENST00000394888 CDKL5O76039 1030 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 BRIP1Q9BX63 1249 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 QSER1Q2KHR3 1735 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 BIN1O00499 593 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 PRR29P0C7W0 189 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 SPATA20Q8TB22 786 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 FANCGO15287 622 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 FBXW7Q969H0 707 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 PHF20Q9BVI0 1012 aa17.8■□□□□ 0.44
CPSF7-202ENST00000394888 BAZ2BQ9UIF8 2168 aaKnown RBP17.8■□□□□ 0.44
CPSF7-202ENST00000394888 ELOA2Q8IYF1 753 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-202ENST00000394888 XPO4Q9C0E2 1151 aaKnown RBP17.79■□□□□ 0.44
CPSF7-202ENST00000394888 FOXP1Q9H334 677 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-202ENST00000394888 PLEKHA8P1O95397 391 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 PTPREP23469 700 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 SSRP1Q08945 709 aaKnown RBP17.79■□□□□ 0.44
CPSF7-202ENST00000394888 SPECC1Q5M775 1068 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 DIS3L2Q8IYB7 885 aaKnown RBP17.79■□□□□ 0.44
CPSF7-202ENST00000394888 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 TDO2P48775 406 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 MECOMQ03112 1051 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 WTAPQ15007 396 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 VPS72Q15906 364 aa17.79■□□□□ 0.44
CPSF7-202ENST00000394888 NMT2O60551 498 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 SLC3A2P08195 630 aaKnown RBP17.78■□□□□ 0.44
CPSF7-202ENST00000394888 RTN1Q16799 776 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 SLC35G1Q2M3R5 365 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 RCSD1Q6JBY9 416 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 ANKRD18AQ8IVF6 992 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 CEP57L1Q8IYX8 460 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 ANKRD7Q92527 254 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 SMARCC1Q92922 1105 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-202ENST00000394888 CDC5LQ99459 802 aaKnown RBP17.78■□□□□ 0.44
CPSF7-202ENST00000394888 LRP2BPQ9P2M1 347 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 NARFQ9UHQ1 456 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 NUTM2BA6NNL0 878 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-202ENST00000394888 NUTM2EB1AL46 878 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-202ENST00000394888 ACTN4O43707 911 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms