RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 CTAGE8P0CG41 777 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 AIMP1Q12904 312 aaKnown RBP24.77■■□□□ 1.56
CLDND1-202ENST00000394180 SPECC1LQ69YQ0 1117 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 CTAGE6Q86UF2 777 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 CTAGE4Q8IX94 777 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 TBC1D22AQ8WUA7 517 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 DPF2Q92785 391 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 TAF5LO75529 589 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 SYF2O95926 243 aaKnown RBP24.77■■□□□ 1.56
CLDND1-202ENST00000394180 A1BGP04217 495 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 ERCC3P19447 782 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 VSNL1P62760 191 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 TOGARAM2Q6ZUX3 1019 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 CABS1Q96KC9 395 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 CDHR2Q9BYE9 1310 aa24.76■■□□□ 1.55
CLDND1-202ENST00000394180 OS9Q13438 667 aaPredicted RBP24.76■■□□□ 1.55
CLDND1-202ENST00000394180 BRAPQ7Z569 592 aa24.76■■□□□ 1.55
CLDND1-202ENST00000394180 ILDR1Q86SU0 546 aaPredicted RBP24.76■■□□□ 1.55
CLDND1-202ENST00000394180 AMOTL1Q8IY63 956 aa24.76■■□□□ 1.55
CLDND1-202ENST00000394180 TCEANC2Q96MN5 208 aa24.76■■□□□ 1.55
CLDND1-202ENST00000394180 FTOQ9C0B1 505 aaKnown RBP eCLIP24.76■■□□□ 1.55
CLDND1-202ENST00000394180 FAM237AA0A1B0GTK4 181 aa24.76■■□□□ 1.55
CLDND1-202ENST00000394180 HSP90B1P14625 803 aaKnown RBP24.76■■□□□ 1.55
CLDND1-202ENST00000394180 NEDD9Q14511 834 aa24.76■■□□□ 1.55
CLDND1-202ENST00000394180 STK38Q15208 465 aa24.76■■□□□ 1.55
CLDND1-202ENST00000394180 PTPDC1A2A3K4 754 aa24.75■■□□□ 1.55
CLDND1-202ENST00000394180 CTAGE9A4FU28 777 aa24.75■■□□□ 1.55
CLDND1-202ENST00000394180 NBPF26B4DH59 902 aa24.75■■□□□ 1.55
CLDND1-202ENST00000394180 SF3A1Q15459 793 aaKnown RBP24.75■■□□□ 1.55
CLDND1-202ENST00000394180 NBPF14Q5TI25 921 aa24.75■■□□□ 1.55
CLDND1-202ENST00000394180 NBPF10Q6P3W6 841 aaKnown RBP24.75■■□□□ 1.55
CLDND1-202ENST00000394180 OLFM4Q6UX06 510 aa24.75■■□□□ 1.55
CLDND1-202ENST00000394180 NBPF15Q8N660 670 aa24.75■■□□□ 1.55
CLDND1-202ENST00000394180 SMARCC1Q92922 1105 aaPredicted RBP24.75■■□□□ 1.55
CLDND1-202ENST00000394180 BRWD3Q6RI45 1802 aa24.74■■□□□ 1.55
CLDND1-202ENST00000394180 PI4KAP2A4QPH2 592 aa24.74■■□□□ 1.55
CLDND1-202ENST00000394180 COL9A3Q14050 684 aaPredicted RBP24.74■■□□□ 1.55
CLDND1-202ENST00000394180 LRP10Q7Z4F1 713 aa24.74■■□□□ 1.55
CLDND1-202ENST00000394180 PI4KAP1Q8N8J0 262 aa24.74■■□□□ 1.55
CLDND1-202ENST00000394180 LAMB4A4D0S4 1761 aa24.74■■□□□ 1.55
CLDND1-202ENST00000394180 A0A0D9SFI3 127 aa24.74■■□□□ 1.55
CLDND1-202ENST00000394180 LRRIQ3A6PVS8 624 aaPredicted RBP24.74■■□□□ 1.55
CLDND1-202ENST00000394180 SPTLC2O15270 562 aa24.74■■□□□ 1.55
CLDND1-202ENST00000394180 INPP5BP32019 993 aa24.74■■□□□ 1.55
CLDND1-202ENST00000394180 FSBPO95073 299 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 GPTP24298 496 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 KRT27Q7Z3Y8 459 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 GIMAP7Q8NHV1 300 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 XAGE2Q96GT9 111 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 SHTN1A0MZ66 631 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 TARSL2A2RTX5 802 aaKnown RBP24.73■■□□□ 1.55
CLDND1-202ENST00000394180 PPFIA1Q13136 1202 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 POTEAQ6S8J7 498 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 B4GALNT4Q76KP1 1039 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 TICAM2Q86XR7 235 aa24.73■■□□□ 1.55
CLDND1-202ENST00000394180 PALLDQ8WX93 1383 aa24.72■■□□□ 1.55
CLDND1-202ENST00000394180 CTDNEP1O95476 244 aa24.72■■□□□ 1.55
CLDND1-202ENST00000394180 FBXW7Q969H0 707 aa24.72■■□□□ 1.55
CLDND1-202ENST00000394180 ZNF274Q96GC6 653 aaPredicted RBP24.72■■□□□ 1.55
CLDND1-202ENST00000394180 INTS13Q9NVM9 706 aa24.72■■□□□ 1.55
CLDND1-202ENST00000394180 ADGRG1Q9Y653 693 aa24.72■■□□□ 1.55
CLDND1-202ENST00000394180 CHUKO15111 745 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 RXRBP28702 533 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 COPS6Q7L5N1 327 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 EGFL6Q8IUX8 553 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 XAGE3Q8WTP9 111 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 TTF2Q9UNY4 1162 aaKnown RBP24.71■■□□□ 1.55
CLDND1-202ENST00000394180 LIG3P49916 1009 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 NBPF20Q3BBV1 942 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 FBXL16Q8N461 479 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 FAM76AQ8TAV0 307 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 PUF60Q9UHX1 559 aaKnown RBP24.71■■□□□ 1.55
CLDND1-202ENST00000394180 HPCAL4Q9UM19 191 aa24.71■■□□□ 1.55
CLDND1-202ENST00000394180 LOC102724428A0A0B4J2F2 783 aa24.7■■□□□ 1.55
CLDND1-202ENST00000394180 KCNQ4P56696 695 aa24.7■■□□□ 1.55
CLDND1-202ENST00000394180 SIK1P57059 783 aa24.7■■□□□ 1.55
CLDND1-202ENST00000394180 BEND3Q5T5X7 828 aa24.7■■□□□ 1.55
CLDND1-202ENST00000394180 RASGRP2Q7LDG7 609 aa24.7■■□□□ 1.55
CLDND1-202ENST00000394180 YTHDF3Q7Z739 585 aaKnown RBP24.7■■□□□ 1.55
CLDND1-202ENST00000394180 CCDC148Q8NFR7 591 aa24.7■■□□□ 1.55
CLDND1-202ENST00000394180 RPGRIP1Q96KN7 1286 aa24.7■■□□□ 1.55
CLDND1-202ENST00000394180 PAGR1Q9BTK6 254 aa24.7■■□□□ 1.55
CLDND1-202ENST00000394180 IRAK1P51617 712 aa24.7■■□□□ 1.54
CLDND1-202ENST00000394180 DHX32Q7L7V1 743 aaKnown RBP24.7■■□□□ 1.54
CLDND1-202ENST00000394180 FSD1Q9BTV5 496 aa24.7■■□□□ 1.54
CLDND1-202ENST00000394180 MRPL44Q9H9J2 332 aaKnown RBP24.7■■□□□ 1.54
CLDND1-202ENST00000394180 MAP3K15Q6ZN16 1313 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 ZC3H4Q9UPT8 1303 aaKnown RBP24.69■■□□□ 1.54
CLDND1-202ENST00000394180 TMEM232C9JQI7 657 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 FECHP22830 423 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 IGSF22Q8N9C0 903 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 COG1Q8WTW3 980 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 NAPGQ99747 312 aaPredicted RBP24.69■■□□□ 1.54
CLDND1-202ENST00000394180 SUGCTQ9HAC7 445 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 TAF6LQ9Y6J9 622 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 BIN1O00499 593 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 PFKFB1P16118 471 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 MCM8Q9UJA3 840 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 HPSEQ9Y251 543 aa24.69■■□□□ 1.54
CLDND1-202ENST00000394180 MAP3K2Q9Y2U5 619 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms