RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CRACR2BQ8N4Y2 399 aaPredicted RBP10.49□□□□□ -0.73
TDP1-202ENST00000393452 GRAPLQ8TC17 118 aaPredicted RBP10.49□□□□□ -0.73
TDP1-202ENST00000393452 MAP3K14Q99558 947 aa10.49□□□□□ -0.73
TDP1-202ENST00000393452 SLC26A6Q9BXS9 759 aa10.49□□□□□ -0.73
TDP1-202ENST00000393452 DNAJC25Q9H1X3 360 aa10.49□□□□□ -0.73
TDP1-202ENST00000393452 TRPC5Q9UL62 973 aaPredicted RBP10.49□□□□□ -0.73
TDP1-202ENST00000393452 TNKSO95271 1327 aa10.49□□□□□ -0.73
TDP1-202ENST00000393452 A0A1B0GVL5 298 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 PPP6R2O75170 966 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 CMA1P23946 247 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 NDUFA8P51970 172 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 TRIM29Q14134 588 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 IQCB1Q15051 598 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 STX1AQ16623 288 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
TDP1-202ENST00000393452 C15orf52Q6ZUT6 534 aaKnown RBP10.48□□□□□ -0.73
TDP1-202ENST00000393452 TRIM22Q8IYM9 498 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 CNBD1Q8NA66 436 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
TDP1-202ENST00000393452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
TDP1-202ENST00000393452 LEMD3Q9Y2U8 911 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 ORC4O43929 436 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 GUCY1A2P33402 732 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 CRY2Q49AN0 593 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 ENAHQ8N8S7 591 aaPredicted RBP10.48□□□□□ -0.73
TDP1-202ENST00000393452 ZSCAN10Q96SZ4 725 aaPredicted RBP10.48□□□□□ -0.73
TDP1-202ENST00000393452 CRNKL1Q9BZJ0 848 aaKnown RBP10.48□□□□□ -0.73
TDP1-202ENST00000393452 DCP1AQ9NPI6 582 aaPredicted RBP10.48□□□□□ -0.73
TDP1-202ENST00000393452 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.48□□□□□ -0.73
TDP1-202ENST00000393452 ATP8A2Q9NTI2 1148 aa10.48□□□□□ -0.73
TDP1-202ENST00000393452 CYP2D7A0A087X1C5 515 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.47□□□□□ -0.73
TDP1-202ENST00000393452 FAM237AA0A1B0GTK4 181 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 USP17L12C9JPN9 530 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 USP17L21D6R901 530 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 WDHD1O75717 1129 aaPredicted RBP10.47□□□□□ -0.73
TDP1-202ENST00000393452 DEXIO95424 95 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 MMP1P03956 469 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 SBK1Q52WX2 424 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 SPTY2D1Q68D10 685 aaPredicted RBP10.47□□□□□ -0.73
TDP1-202ENST00000393452 PRR5LQ6MZQ0 368 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 C11orf57Q6ZUT1 292 aaPredicted RBP10.47□□□□□ -0.73
TDP1-202ENST00000393452 NOSTRINQ8IVI9 506 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 NPHP1O15259 732 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.47□□□□□ -0.73
TDP1-202ENST00000393452 JMYQ8N9B5 988 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 RNF26Q9BY78 433 aaPredicted RBP10.47□□□□□ -0.73
TDP1-202ENST00000393452 FOXP1Q9H334 677 aaPredicted RBP10.47□□□□□ -0.73
TDP1-202ENST00000393452 AATFQ9NY61 560 aaKnown RBP eCLIP10.47□□□□□ -0.73
TDP1-202ENST00000393452 XDHP47989 1333 aa10.47□□□□□ -0.73
TDP1-202ENST00000393452 ZNF202O95125 648 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 GYS1P13807 737 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 FUT2Q10981 343 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 CHAF1AQ13111 956 aaPredicted RBP10.46□□□□□ -0.73
TDP1-202ENST00000393452 GNL2Q13823 731 aaKnown RBP10.46□□□□□ -0.73
TDP1-202ENST00000393452 IQCA1Q86XH1 822 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 PLA2G4DQ86XP0 818 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 WDR66Q8TBY9 1149 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 SDF4Q9BRK5 362 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 ANO10Q9NW15 660 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 ARPP21Q9UBL0 812 aaPredicted RBP10.46□□□□□ -0.73
TDP1-202ENST00000393452 MKRN1Q9UHC7 482 aaKnown RBP10.46□□□□□ -0.73
TDP1-202ENST00000393452 HPSEQ9Y251 543 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 MROH7-TTC4A0A0A0MT08 1334 aa10.46□□□□□ -0.73
TDP1-202ENST00000393452 TPM3P06753 285 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 PFKFB1P16118 471 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 MARCKSP29966 332 aaPredicted RBP10.46□□□□□ -0.74
TDP1-202ENST00000393452 TROAPQ12815 778 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 SLC27A3Q5K4L6 730 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 SARM1Q6SZW1 724 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 NUP133Q8WUM0 1156 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 TIGD1Q96MW7 591 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 KIAA1468Q9P260 1216 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 ANKIB1Q9P2G1 1089 aa10.46□□□□□ -0.74
TDP1-202ENST00000393452 BTBD18B2RXH4 712 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 CALM1P0DP23 149 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 CALM2P0DP24 149 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 CALM3P0DP25 149 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 KIAA2012Q0VF49 1180 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 SAFBQ15424 915 aaKnown RBP eCLIP10.45□□□□□ -0.74
TDP1-202ENST00000393452 IFIT1BQ5T764 474 aaKnown RBP10.45□□□□□ -0.74
TDP1-202ENST00000393452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.45□□□□□ -0.74
TDP1-202ENST00000393452 DIS3L2Q8IYB7 885 aaKnown RBP10.45□□□□□ -0.74
TDP1-202ENST00000393452 TTC12Q9H892 705 aaPredicted RBP10.45□□□□□ -0.74
TDP1-202ENST00000393452 GOLGA6L6A8MZA4 724 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 PRDM1O75626 825 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 DDAH1O94760 285 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 NT5C2P49902 561 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 TOB1P50616 345 aaPredicted RBP10.45□□□□□ -0.74
TDP1-202ENST00000393452 ZNF75DP51815 510 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 SHC4Q6S5L8 630 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 CATIPQ7Z7H3 387 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 SLC51AQ86UW1 340 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 DZIP1Q86YF9 867 aaKnown RBP10.45□□□□□ -0.74
TDP1-202ENST00000393452 CMTR1Q8N1G2 835 aaKnown RBP10.45□□□□□ -0.74
TDP1-202ENST00000393452 MPNDQ8N594 471 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 PIBF1Q8WXW3 757 aa10.45□□□□□ -0.74
TDP1-202ENST00000393452 ZNF830Q96NB3 372 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms