RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 MEIS3P2A8K0S8 358 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 H3BRJ5 948 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 GFRA2O00451 464 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 C2CD2LO14523 706 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 ST8SIA5O15466 376 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 ADCY3O60266 1144 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 RAPGEF3O95398 923 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 AVPP01185 164 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 PGRP06401 933 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 VIL1P09327 827 aaKnown RBP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 NME1P15531 152 aaKnown RBP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 LIG1P18858 919 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 ITGA6P23229 1130 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 MAOBP27338 520 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 NFKB2Q00653 900 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 SLC7A5Q01650 507 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 PABPC4Q13310 644 aaKnown RBP eCLIP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 MLECQ14165 292 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 NCAPHQ15003 741 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 GNPTABQ3T906 1256 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 SV2CQ496J9 727 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 TM4SF20Q53R12 229 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 BRDTQ58F21 947 aaPredicted RBP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 FAM182BQ5T319 152 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 ZNF468Q5VIY5 522 aaPredicted RBP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 FOXB2Q5VYV0 432 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 TDRD10Q5VZ19 366 aaKnown RBP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 PSAPL1Q6NUJ1 521 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 CNNM4Q6P4Q7 775 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 NLRC3Q7RTR2 1065 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 HDXQ7Z353 690 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 KRT26Q7Z3Y9 468 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 C12orf40Q86WS4 652 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 WDR75Q8IWA0 830 aaKnown RBP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 LRRC47Q8N1G4 583 aaKnown RBP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 JMYQ8N9B5 988 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 ZBTB38Q8NAP3 1195 aaPredicted RBP2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 KLHL6Q8WZ60 621 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 NINJ1Q92982 152 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 SGSM3Q96HU1 749 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 PSMG3-AS1Q96PY0 264 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 SLC9A7Q96T83 725 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 PSMD1Q99460 953 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 CDC6Q99741 560 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 LPIN3Q9BQK8 851 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 CORO1BQ9BR76 489 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 CARD10Q9BWT7 1032 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 ADAM19Q9H013 955 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 TMX1Q9H3N1 280 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 ATP13A2Q9NQ11 1180 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 DACH1Q9UI36 760 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 PLAAQ9Y263 795 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 ATP8A1Q9Y2Q0 1164 aa2.59□□□□□ -1.99
SNORA48.1-201ENST00000390879 CCDC194A0A1B0GVG4 234 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 IQCA1LA6NCM1 817 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 CHURC1-FNTBB4DL54 471 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 LINC01387J3KSC0 135 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 ZNF862O60290 1169 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 PDE8AO60658 829 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 SIN3BO75182 1162 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 TP53P04637 393 aaPredicted RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 CTSBP07858 339 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 RAG1P15918 1043 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 POU3F3P20264 500 aaPredicted RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 GRK4P32298 578 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 SOX5P35711 763 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 STAT3P40763 770 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 SMCPP49901 116 aaPredicted RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 ETF1P62495 437 aaKnown RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 PDE4BQ07343 736 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 C19orf57Q0VDD7 668 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 POU4F3Q15319 338 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 FAM209AQ5JX71 171 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 YOD1Q5VVQ6 348 aaPredicted RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 FOXR1Q6PIV2 292 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 DDX42Q86XP3 938 aaKnown RBP eCLIP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 THNSL2Q86YJ6 484 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 CCDC146Q8IYE0 955 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 VWA5B2Q8N398 1253 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 SYNPOQ8N3V7 929 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 IL22RA1Q8N6P7 574 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 FAM13CQ8NE31 585 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 ATL2Q8NHH9 583 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 ZNF526Q8TF50 670 aaPredicted RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 TSR2Q969E8 191 aaKnown RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 WDR89Q96FK6 387 aaPredicted RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 CCDC136Q96JN2 1154 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 EXOC2Q96KP1 924 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 IPO9Q96P70 1041 aaKnown RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 SLC26A8Q96RN1 970 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 LGR4Q9BXB1 951 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 USP26Q9BXU7 913 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 PHAXQ9H814 394 aaKnown RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 CAAP1Q9H8G2 361 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 PICK1Q9NRD5 415 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 TYW1Q9NV66 732 aaKnown RBP2.58□□□□□ -2
SNORA48.1-201ENST00000390879 LRP2BPQ9P2M1 347 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 STK17AQ9UEE5 414 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 TCEAL9Q9UHQ7 104 aa2.58□□□□□ -2
SNORA48.1-201ENST00000390879 THRAP3Q9Y2W1 955 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms