RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CD19P15391 556 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 PDCD2Q16342 344 aaPredicted RBP6.51□□□□□ -1.37
RFX3-204ENST00000382004 ANKRD13DQ6ZTN6 518 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 RSAD2Q8WXG1 361 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 CARD10Q9BWT7 1032 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 ANLNQ9NQW6 1124 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 SFMBT1Q9UHJ3 866 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 RIPOR2Q9Y4F9 1068 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 NUB1Q9Y5A7 615 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 CLCN1P35523 988 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 PEX19P40855 299 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 MMEL1Q495T6 779 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 NLRP3Q96P20 1036 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 ZNF408Q9H9D4 720 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 PAG1Q9NWQ8 432 aa6.51□□□□□ -1.37
RFX3-204ENST00000382004 PRPF6O94906 941 aaKnown RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 STX2P32856 288 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 CDAN1Q8IWY9 1227 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.5□□□□□ -1.37
RFX3-204ENST00000382004 ARHGEF35A5YM69 484 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 NMIQ13287 307 aaPredicted RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 FRMD3A2A2Y4 597 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 SYF2O95926 243 aaKnown RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 ATP6V1AP38606 617 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 RAD51AP2Q09MP3 1159 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 CNNM4Q6P4Q7 775 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 CCDC13Q8IYE1 715 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 TBC1D32Q96NH3 1257 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 MED10Q9BTT4 135 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 ZC3H12CQ9C0D7 883 aaKnown RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 SUFUQ9UMX1 484 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 PFDN1O60925 122 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 MYL5Q02045 173 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 KRT81Q14533 505 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 CAPN12Q6ZSI9 719 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 HDAC11Q96DB2 347 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 GJA3Q9Y6H8 435 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 KRT71Q3SY84 523 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 SLC9C1Q4G0N8 1177 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 PHLDB3Q6NSJ2 640 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 SECISBP2LQ93073 1101 aaKnown RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 ESYT1Q9BSJ8 1104 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 Q9H521 79 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 PLEKHH2Q8IVE3 1493 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 RNF40O75150 1001 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 SNRPA1P09661 255 aaKnown RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 ZYXQ15942 572 aaKnown RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 NCAPH2Q6IBW4 605 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 FNBP4Q8N3X1 1017 aaPredicted RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 ERO1AQ96HE7 468 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 EMILIN1Q9Y6C2 1016 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 ELP1O95163 1332 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 ABCC11Q96J66 1382 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 SPDYE2BA6NHP3 402 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 DNAJC8O75937 253 aaPredicted RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 SPDYE6P0CI01 402 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 MAP2K2P36507 400 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 ARHGAP4P98171 946 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 FOXD4Q12950 439 aaPredicted RBP6.5□□□□□ -1.37
RFX3-204ENST00000382004 ZBTB17Q13105 803 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 RNF217Q8TC41 542 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 LRGUKQ96M69 825 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 ZC4H2Q9NQZ6 224 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 PICK1Q9NRD5 415 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 EXOC7Q9UPT5 735 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 NIP7Q9Y221 180 aaKnown RBP eCLIP6.5□□□□□ -1.37
RFX3-204ENST00000382004 CAMSAP2Q08AD1 1489 aa6.5□□□□□ -1.37
RFX3-204ENST00000382004 PTPDC1A2A3K4 754 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 EIF6P56537 245 aaKnown RBP6.49□□□□□ -1.37
RFX3-204ENST00000382004 IFNL2Q8IZJ0 200 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 HNRNPCL2B2RXH8 293 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 HNRNPCL1O60812 293 aaKnown RBP6.49□□□□□ -1.37
RFX3-204ENST00000382004 GUCY2FP51841 1108 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 PAK2Q13177 524 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 BRDTQ58F21 947 aaPredicted RBP6.49□□□□□ -1.37
RFX3-204ENST00000382004 CSGALNACT2Q8N6G5 542 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 STAG1Q8WVM7 1258 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 TMOD4Q9NZQ9 345 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 PPP1R9AQ9ULJ8 1098 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 FAN1Q9Y2M0 1017 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 RGS16O15492 202 aaPredicted RBP6.49□□□□□ -1.37
RFX3-204ENST00000382004 IFRD2Q12894 506 aaPredicted RBP6.49□□□□□ -1.37
RFX3-204ENST00000382004 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.49□□□□□ -1.37
RFX3-204ENST00000382004 PEX26Q7Z412 305 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 CFAP61Q8NHU2 1237 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 TRIM4Q9C037 500 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 CHPF2Q9P2E5 772 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 CD2APQ9Y5K6 639 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 PLCG2P16885 1265 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 ELF2Q15723 593 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 SCYL2Q6P3W7 929 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 HELBQ8NG08 1087 aaPredicted RBP6.49□□□□□ -1.37
RFX3-204ENST00000382004 PARD3BQ8TEW8 1205 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 ST7Q9NRC1 585 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 IRAK4Q9NWZ3 460 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.49□□□□□ -1.37
RFX3-204ENST00000382004 SYNRGQ9UMZ2 1314 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 WIZO95785 1651 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 GCNT3O95395 438 aa6.49□□□□□ -1.37
RFX3-204ENST00000382004 GNAT2P19087 354 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms