RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 TTF1Q15361 905 aaPredicted RBP30.02■■■□□ 2.4
TNFRSF4-201ENST00000379236 CERS3Q8IU89 383 aa30.02■■■□□ 2.4
TNFRSF4-201ENST00000379236 HERC5Q9UII4 1024 aaKnown RBP30.02■■■□□ 2.4
TNFRSF4-201ENST00000379236 RGS19P49795 217 aa30.01■■■□□ 2.39
TNFRSF4-201ENST00000379236 PI4KBQ9UBF8 816 aa30.01■■■□□ 2.39
TNFRSF4-201ENST00000379236 SIPA1L1O43166 1804 aa30.01■■■□□ 2.39
TNFRSF4-201ENST00000379236 FLT1P17948 1338 aa30■■■□□ 2.39
TNFRSF4-201ENST00000379236 TMED8Q6PL24 325 aaPredicted RBP30■■■□□ 2.39
TNFRSF4-201ENST00000379236 GADL1Q6ZQY3 521 aa30■■■□□ 2.39
TNFRSF4-201ENST00000379236 FASTKD5Q7L8L6 764 aaKnown RBP30■■■□□ 2.39
TNFRSF4-201ENST00000379236 CRACR2BQ8N4Y2 399 aaPredicted RBP29.99■■■□□ 2.39
TNFRSF4-201ENST00000379236 MIGA1Q8NAN2 632 aa29.99■■■□□ 2.39
TNFRSF4-201ENST00000379236 DNAJC2Q99543 621 aaKnown RBP29.99■■■□□ 2.39
TNFRSF4-201ENST00000379236 ANTXR1Q9H6X2 564 aa29.99■■■□□ 2.39
TNFRSF4-201ENST00000379236 HLA-DOAP06340 250 aa29.98■■■□□ 2.39
TNFRSF4-201ENST00000379236 USP5P45974 858 aa29.98■■■□□ 2.39
TNFRSF4-201ENST00000379236 DYNLL1P63167 89 aaKnown RBP29.98■■■□□ 2.39
TNFRSF4-201ENST00000379236 PARK7Q99497 189 aaKnown RBP29.98■■■□□ 2.39
TNFRSF4-201ENST00000379236 PTPN22Q9Y2R2 807 aa29.98■■■□□ 2.39
TNFRSF4-201ENST00000379236 AFG3L2Q9Y4W6 797 aa29.98■■■□□ 2.39
TNFRSF4-201ENST00000379236 A0A0G2JLL6 359 aaPredicted RBP29.97■■■□□ 2.39
TNFRSF4-201ENST00000379236 PRRT2Q7Z6L0 340 aaPredicted RBP29.97■■■□□ 2.39
TNFRSF4-201ENST00000379236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.97■■■□□ 2.39
TNFRSF4-201ENST00000379236 ZSWIM8A7E2V4 1837 aa29.96■■■□□ 2.39
TNFRSF4-201ENST00000379236 MYH7P12883 1935 aa29.96■■■□□ 2.39
TNFRSF4-201ENST00000379236 NAV1Q8NEY1 1877 aa29.96■■■□□ 2.39
TNFRSF4-201ENST00000379236 TRIM75PA6NK02 468 aa29.96■■■□□ 2.39
TNFRSF4-201ENST00000379236 TBC1D2Q9BYX2 928 aa29.95■■■□□ 2.39
TNFRSF4-201ENST00000379236 LRRCC1Q9C099 1032 aa29.95■■■□□ 2.39
TNFRSF4-201ENST00000379236 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.95■■■□□ 2.39
TNFRSF4-201ENST00000379236 SAP30BPQ9UHR5 308 aaKnown RBP29.95■■■□□ 2.39
TNFRSF4-201ENST00000379236 CPA4Q9UI42 421 aa29.95■■■□□ 2.39
TNFRSF4-201ENST00000379236 GOLIM4O00461 696 aa29.94■■■□□ 2.38
TNFRSF4-201ENST00000379236 CAP2P40123 477 aa29.94■■■□□ 2.38
TNFRSF4-201ENST00000379236 MOGSQ13724 837 aa29.94■■■□□ 2.38
TNFRSF4-201ENST00000379236 PALD1Q9ULE6 856 aa29.94■■■□□ 2.38
TNFRSF4-201ENST00000379236 MGAMO43451 1857 aa29.93■■■□□ 2.38
TNFRSF4-201ENST00000379236 LACTBP83111 547 aaPredicted RBP29.93■■■□□ 2.38
TNFRSF4-201ENST00000379236 CCDC84Q86UT8 332 aaPredicted RBP29.93■■■□□ 2.38
TNFRSF4-201ENST00000379236 FOXP4Q8IVH2 680 aaPredicted RBP29.93■■■□□ 2.38
TNFRSF4-201ENST00000379236 AS3MTQ9HBK9 375 aa29.93■■■□□ 2.38
TNFRSF4-201ENST00000379236 SLC9C2Q5TAH2 1124 aa29.92■■■□□ 2.38
TNFRSF4-201ENST00000379236 GPAT2Q6NUI2 795 aa29.92■■■□□ 2.38
TNFRSF4-201ENST00000379236 YTHDC1Q96MU7 727 aaKnown RBP29.92■■■□□ 2.38
TNFRSF4-201ENST00000379236 LOC285556D6RIA3 1793 aa29.92■■■□□ 2.38
TNFRSF4-201ENST00000379236 MAGEB6P1A0A0J9YX57 407 aa29.91■■■□□ 2.38
TNFRSF4-201ENST00000379236 USP17L5A8MUK1 530 aa29.91■■■□□ 2.38
TNFRSF4-201ENST00000379236 ECM2O94769 699 aaPredicted RBP29.91■■■□□ 2.38
TNFRSF4-201ENST00000379236 SLC4A8Q2Y0W8 1093 aa29.91■■■□□ 2.38
TNFRSF4-201ENST00000379236 C17orf99Q6UX52 265 aa29.91■■■□□ 2.38
TNFRSF4-201ENST00000379236 ZNF280CQ8ND82 737 aa29.9■■■□□ 2.38
TNFRSF4-201ENST00000379236 BOLA2Q9H3K6 86 aa29.9■■■□□ 2.38
TNFRSF4-201ENST00000379236 PAG1Q9NWQ8 432 aa29.9■■■□□ 2.38
TNFRSF4-201ENST00000379236 GNRH1P01148 92 aa29.89■■■□□ 2.38
TNFRSF4-201ENST00000379236 CYP2C8P10632 490 aa29.89■■■□□ 2.38
TNFRSF4-201ENST00000379236 PDE6AP16499 860 aa29.89■■■□□ 2.38
TNFRSF4-201ENST00000379236 SPP2Q13103 211 aa29.89■■■□□ 2.38
TNFRSF4-201ENST00000379236 SLC45A1Q9Y2W3 748 aa29.89■■■□□ 2.38
TNFRSF4-201ENST00000379236 ASNSP08243 561 aa29.88■■■□□ 2.37
TNFRSF4-201ENST00000379236 SMCR8Q8TEV9 937 aaPredicted RBP29.88■■■□□ 2.37
TNFRSF4-201ENST00000379236 ARHGAP39Q9C0H5 1083 aa29.88■■■□□ 2.37
TNFRSF4-201ENST00000379236 PNMA3Q9UL41 463 aa29.88■■■□□ 2.37
TNFRSF4-201ENST00000379236 AGTPBP1Q9UPW5 1226 aa29.88■■■□□ 2.37
TNFRSF4-201ENST00000379236 ATP5JP18859 108 aa29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 CAP1Q01518 475 aa29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 SLC9C1Q4G0N8 1177 aa29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 NBPF11Q86T75 865 aa29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 TTC6Q86TZ1 520 aa29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 CRNKL1Q9BZJ0 848 aaKnown RBP29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 ADGRA2Q96PE1 1338 aa29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 ZNF532Q9HCE3 1301 aa29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 RBBP6Q7Z6E9 1792 aaKnown RBP29.87■■■□□ 2.37
TNFRSF4-201ENST00000379236 MYH8P13535 1937 aa29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 HTTP42858 3142 aa29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 SMARCA5O60264 1052 aaPredicted RBP29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 FMNL1O95466 1100 aaPredicted RBP29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 HOXD10P28358 340 aa29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 PSMC4P43686 418 aa29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 PRMT2P55345 433 aa29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 PABPC4Q13310 644 aaKnown RBP eCLIP29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 RRP1BQ14684 758 aaKnown RBP29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 PROCA1Q8NCQ7 364 aaPredicted RBP29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 PTCH2Q9Y6C5 1203 aa29.86■■■□□ 2.37
TNFRSF4-201ENST00000379236 GDF11O95390 407 aa29.85■■■□□ 2.37
TNFRSF4-201ENST00000379236 RRP1P56182 461 aaKnown RBP29.85■■■□□ 2.37
TNFRSF4-201ENST00000379236 GPATCH3Q96I76 525 aa29.85■■■□□ 2.37
TNFRSF4-201ENST00000379236 DNAJC18Q9H819 358 aa29.85■■■□□ 2.37
TNFRSF4-201ENST00000379236 GINM1Q9NU53 330 aa29.85■■■□□ 2.37
TNFRSF4-201ENST00000379236 DDX60LQ5H9U9 1706 aaKnown RBP29.85■■■□□ 2.37
TNFRSF4-201ENST00000379236 HMGCS2P54868 508 aa29.84■■■□□ 2.37
TNFRSF4-201ENST00000379236 METTL16Q86W50 562 aaKnown RBP29.84■■■□□ 2.37
TNFRSF4-201ENST00000379236 EDC3Q96F86 508 aaKnown RBP29.84■■■□□ 2.37
TNFRSF4-201ENST00000379236 HAUS7Q99871 368 aa29.84■■■□□ 2.37
TNFRSF4-201ENST00000379236 RIOK1Q9BRS2 568 aaKnown RBP29.84■■■□□ 2.37
TNFRSF4-201ENST00000379236 SERPINB13Q9UIV8 391 aa29.84■■■□□ 2.37
TNFRSF4-201ENST00000379236 POLR3DP05423 398 aaPredicted RBP29.83■■■□□ 2.37
TNFRSF4-201ENST00000379236 TMOD4Q9NZQ9 345 aa29.83■■■□□ 2.37
TNFRSF4-201ENST00000379236 TNRC18O15417 2968 aaPredicted RBP29.82■■■□□ 2.36
TNFRSF4-201ENST00000379236 BCRP11274 1271 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms