RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CAVIN4Q5BKX8 364 aa14.14□□□□□ -0.15
UBR4-203ENST00000375225 CYB5R4Q7L1T6 521 aa14.14□□□□□ -0.15
UBR4-203ENST00000375225 ILDR1Q86SU0 546 aaPredicted RBP14.14□□□□□ -0.15
UBR4-203ENST00000375225 IGDCC4Q8TDY8 1250 aa14.14□□□□□ -0.15
UBR4-203ENST00000375225 CCDC34Q96HJ3 373 aa14.14□□□□□ -0.15
UBR4-203ENST00000375225 ZNF830Q96NB3 372 aaPredicted RBP14.14□□□□□ -0.15
UBR4-203ENST00000375225 LY9Q9HBG7 655 aa14.14□□□□□ -0.15
UBR4-203ENST00000375225 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
UBR4-203ENST00000375225 SLC4A4Q9Y6R1 1079 aa14.14□□□□□ -0.15
UBR4-203ENST00000375225 SEMA3EO15041 775 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 AP5Z1O43299 807 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 IGSF3O75054 1194 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 SLC3A2P08195 630 aaKnown RBP14.13□□□□□ -0.15
UBR4-203ENST00000375225 GSDMDP57764 484 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 IQCB1Q15051 598 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 MICU3Q86XE3 530 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 MYRIPQ8NFW9 859 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 NBPF3Q9H094 633 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 KIAA1468Q9P260 1216 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 DENND2AQ9ULE3 1009 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 CEP131Q9UPN4 1083 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 CLIC4Q9Y696 253 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 ANKRD31Q8N7Z5 1873 aa14.13□□□□□ -0.15
UBR4-203ENST00000375225 MYO5AQ9Y4I1 1855 aaKnown RBP14.13□□□□□ -0.15
UBR4-203ENST00000375225 MYO1BO43795 1136 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 CUTAO60888 179 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 FMNL1O95466 1100 aaPredicted RBP14.12□□□□□ -0.15
UBR4-203ENST00000375225 MMP10P09238 476 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 IFNAR1P17181 557 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 NT5C2P49902 561 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 RTN1Q16799 776 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 KRT40Q6A162 431 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 VPS37DQ86XT2 251 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 UBAC1Q9BSL1 405 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 BRIP1Q9BX63 1249 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 FTOQ9C0B1 505 aaKnown RBP eCLIP14.12□□□□□ -0.15
UBR4-203ENST00000375225 PDCL3Q9H2J4 239 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 ARMT1Q9H993 441 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 MINPP1Q9UNW1 487 aa14.12□□□□□ -0.15
UBR4-203ENST00000375225 ZNF202O95125 648 aa14.11□□□□□ -0.15
UBR4-203ENST00000375225 PTGS1P23219 599 aa14.11□□□□□ -0.15
UBR4-203ENST00000375225 AKAP17AQ02040 695 aaKnown RBP14.11□□□□□ -0.15
UBR4-203ENST00000375225 CCDC186Q7Z3E2 898 aa14.11□□□□□ -0.15
UBR4-203ENST00000375225 DEFB132Q7Z7B7 95 aa14.11□□□□□ -0.15
UBR4-203ENST00000375225 ESR2Q92731 530 aa14.11□□□□□ -0.15
UBR4-203ENST00000375225 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
UBR4-203ENST00000375225 IMPACTQ9P2X3 320 aa14.11□□□□□ -0.15
UBR4-203ENST00000375225 NEDD4P46934 1319 aa14.11□□□□□ -0.15
UBR4-203ENST00000375225 MAGEB6P1A0A0J9YX57 407 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 A0A1B0GVL5 298 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 GSG1L2A8MUP6 293 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 DEXIO95424 95 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 CYP7A1P22680 504 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 U2AF2P26368 475 aaKnown RBP eCLIP14.1□□□□□ -0.15
UBR4-203ENST00000375225 PDE6BP35913 854 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 SYKP43405 635 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 NDUFA8P51970 172 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 NLRP12P59046 1061 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 MSL1Q68DK7 614 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 ELOA2Q8IYF1 753 aaPredicted RBP14.1□□□□□ -0.15
UBR4-203ENST00000375225 SLC26A6Q9BXS9 759 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 ANAPC4Q9UJX5 808 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 MYH13Q9UKX3 1938 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 KLRG2A4D1S0 409 aaPredicted RBP14.1□□□□□ -0.15
UBR4-203ENST00000375225 CALM1P0DP23 149 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 CALM2P0DP24 149 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 CALM3P0DP25 149 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 HOXA10P31260 410 aaPredicted RBP14.1□□□□□ -0.15
UBR4-203ENST00000375225 BCAMP50895 628 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 RILPL1Q5EBL4 403 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 OTUD7BQ6GQQ9 843 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 C11orf57Q6ZUT1 292 aaPredicted RBP14.1□□□□□ -0.15
UBR4-203ENST00000375225 TMC4Q7Z404 712 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 CRAMP1Q96RY5 1269 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 FOXP1Q9H334 677 aaPredicted RBP14.1□□□□□ -0.15
UBR4-203ENST00000375225 KCNF1Q9H3M0 494 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 EPB41L4AQ9HCS5 686 aaPredicted RBP14.1□□□□□ -0.15
UBR4-203ENST00000375225 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.1□□□□□ -0.15
UBR4-203ENST00000375225 FAM13BQ9NYF5 915 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 RAI14Q9P0K7 980 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 ZSWIM5Q9P217 1185 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 ZNF804BA4D1E1 1349 aa14.1□□□□□ -0.15
UBR4-203ENST00000375225 PDS5AQ29RF7 1337 aaKnown RBP14.1□□□□□ -0.15
UBR4-203ENST00000375225 FAM237AA0A1B0GTK4 181 aa14.09□□□□□ -0.15
UBR4-203ENST00000375225 CBFA2T2O43439 604 aa14.09□□□□□ -0.15
UBR4-203ENST00000375225 PFKFB1P16118 471 aa14.09□□□□□ -0.15
UBR4-203ENST00000375225 GTF2F1P35269 517 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBR4-203ENST00000375225 CTDSPL2Q05D32 466 aa14.09□□□□□ -0.15
UBR4-203ENST00000375225 PPARAQ07869 468 aa14.09□□□□□ -0.15
UBR4-203ENST00000375225 RRP12Q5JTH9 1297 aaKnown RBP14.09□□□□□ -0.15
UBR4-203ENST00000375225 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
UBR4-203ENST00000375225 MPNDQ8N594 471 aa14.09□□□□□ -0.15
UBR4-203ENST00000375225 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBR4-203ENST00000375225 RBM28Q9NW13 759 aaKnown RBP14.09□□□□□ -0.15
UBR4-203ENST00000375225 LRRC37AA6NMS7 1700 aa14.08□□□□□ -0.15
UBR4-203ENST00000375225 KIF28PB7ZC32 967 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 IKBKBO14920 756 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 BBOX1O75936 387 aa14.08□□□□□ -0.16
UBR4-203ENST00000375225 BMP15O95972 392 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms