RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ADD1P35611 737 aaKnown RBP19.61■□□□□ 0.73
PTPRU-202ENST00000373779 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 RASSF4Q9H2L5 321 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 GNA11P29992 359 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 PPP1R2P41236 205 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 VAV2P52735 878 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 LRRC24Q50LG9 513 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 NOC4LQ9BVI4 516 aaKnown RBP19.61■□□□□ 0.73
PTPRU-202ENST00000373779 TAB2Q9NYJ8 693 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 NLRP1Q9C000 1473 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 C6orf229H3BNL8 230 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 MNAT1P51948 309 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 STXBP4Q6ZWJ1 553 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 ERMNQ8TAM6 284 aa19.61■□□□□ 0.73
PTPRU-202ENST00000373779 EFCAB8A8MWE9 144 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 KRT9P35527 623 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 FANCLQ9NW38 375 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 ZRSR2Q15696 482 aaKnown RBP19.6■□□□□ 0.73
PTPRU-202ENST00000373779 AKNAD1Q5T1N1 836 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 AFAP1L1Q8TED9 768 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 FTOQ9C0B1 505 aaKnown RBP eCLIP19.6■□□□□ 0.73
PTPRU-202ENST00000373779 TMOD2Q9NZR1 351 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 ARID5AQ03989 594 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 MICALL1Q8N3F8 863 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 TTC14Q96N46 770 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 PLCD4Q9BRC7 762 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 DENND2AQ9ULE3 1009 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 JAKMIP2Q96AA8 810 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 PRM3Q9NNZ6 103 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 SASH1O94885 1247 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 DPCR1Q3MIW9 517 aa19.6■□□□□ 0.73
PTPRU-202ENST00000373779 SMC1AQ14683 1233 aaKnown RBP19.59■□□□□ 0.73
PTPRU-202ENST00000373779 ACSBG1Q96GR2 724 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 POLR3EQ9NVU0 708 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 ALKQ9UM73 1620 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 SH3TC1Q8TE82 1336 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 GOLGA6L10A0A0M3HER8 536 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 ATRIPQ8WXE1 791 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 GSTTP1A0A1W2PQM5 241 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 PRAMEF22A3QJZ6 481 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 TCIRG1Q13488 830 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 BBXQ8WY36 941 aaPredicted RBP19.59■□□□□ 0.73
PTPRU-202ENST00000373779 GPR108Q9NPR9 543 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 WWC3Q9ULE0 1092 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 HLA-DOAP06340 250 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 PDE4DQ08499 809 aa19.59■□□□□ 0.73
PTPRU-202ENST00000373779 CCDC172P0C7W6 258 aa19.58■□□□□ 0.73
PTPRU-202ENST00000373779 TTC31Q49AM3 519 aaPredicted RBP19.58■□□□□ 0.73
PTPRU-202ENST00000373779 TTLL7Q6ZT98 887 aa19.58■□□□□ 0.73
PTPRU-202ENST00000373779 CCDC51Q96ER9 411 aa19.58■□□□□ 0.73
PTPRU-202ENST00000373779 CLIC6Q96NY7 704 aa19.58■□□□□ 0.73
PTPRU-202ENST00000373779 SETDB2Q96T68 719 aa19.58■□□□□ 0.73
PTPRU-202ENST00000373779 DESI2Q9BSY9 194 aa19.58■□□□□ 0.73
PTPRU-202ENST00000373779 MROH5Q6ZUA9 1318 aa19.58■□□□□ 0.72
PTPRU-202ENST00000373779 PRDM1O75626 825 aa19.58■□□□□ 0.72
PTPRU-202ENST00000373779 CSGALNACT2Q8N6G5 542 aa19.58■□□□□ 0.72
PTPRU-202ENST00000373779 KIAA0753Q2KHM9 967 aa19.58■□□□□ 0.72
PTPRU-202ENST00000373779 LONRF3Q496Y0 759 aa19.58■□□□□ 0.72
PTPRU-202ENST00000373779 NELFBQ8WX92 580 aa19.58■□□□□ 0.72
PTPRU-202ENST00000373779 SLF1Q9BQI6 1058 aa19.58■□□□□ 0.72
PTPRU-202ENST00000373779 EHMT1Q9H9B1 1298 aa19.58■□□□□ 0.72
PTPRU-202ENST00000373779 A0A087WWV3 80 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 GTF2A1P52655 376 aaPredicted RBP19.57■□□□□ 0.72
PTPRU-202ENST00000373779 BRD3Q15059 726 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 DNAJC21Q5F1R6 531 aaKnown RBP19.57■□□□□ 0.72
PTPRU-202ENST00000373779 IFT81Q8WYA0 676 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 VPS54Q9P1Q0 977 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 SLC39A14Q15043 492 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 TRIML1Q8N9V2 468 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 LETM2Q2VYF4 491 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 NUP58Q9BVL2 599 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 MAST3O60307 1309 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 ANKRD62A6NC57 917 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 UTP14CQ5TAP6 766 aaKnown RBP19.57■□□□□ 0.72
PTPRU-202ENST00000373779 SV2BQ7L1I2 683 aa19.57■□□□□ 0.72
PTPRU-202ENST00000373779 CTNNBL1Q8WYA6 563 aaPredicted RBP19.57■□□□□ 0.72
PTPRU-202ENST00000373779 SYCP3Q8IZU3 236 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 TBC1D5Q92609 795 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 TNNI2P48788 182 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 LINC00301Q8NCQ3 95 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 LMBR1Q8WVP7 490 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 SPTLC3Q9NUV7 552 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 IKBKBO14920 756 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 FCHSD1Q86WN1 690 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 ZNF654Q8IZM8 581 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 STAMQ92783 540 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 KIAA1210Q9ULL0 1709 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 ZNF827Q17R98 1081 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 BLZF1Q9H2G9 400 aa19.56■□□□□ 0.72
PTPRU-202ENST00000373779 LMTK2Q8IWU2 1503 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 GIGYF2Q6Y7W6 1299 aaKnown RBP19.55■□□□□ 0.72
PTPRU-202ENST00000373779 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.55■□□□□ 0.72
PTPRU-202ENST00000373779 NCOA3Q9Y6Q9 1424 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 PPP6R2O75170 966 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 CFAP58Q5T655 872 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 CNNM4Q6P4Q7 775 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 DNAJC10Q8IXB1 793 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 MED23Q9ULK4 1368 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 M0R2C6 588 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 PARP10Q53GL7 1025 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms