RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 CCDC34Q96HJ3 373 aa20.67■□□□□ 0.9
HNF4A-203ENST00000372920 PLA2G12BQ9BX93 195 aa20.67■□□□□ 0.9
HNF4A-203ENST00000372920 MMP1P03956 469 aa20.67■□□□□ 0.9
HNF4A-203ENST00000372920 TTF1Q15361 905 aaPredicted RBP20.67■□□□□ 0.9
HNF4A-203ENST00000372920 ARFGAP3Q9NP61 516 aa20.67■□□□□ 0.9
HNF4A-203ENST00000372920 TMEM51Q9NW97 253 aa20.67■□□□□ 0.9
HNF4A-203ENST00000372920 KCNJ14Q9UNX9 436 aa20.67■□□□□ 0.9
HNF4A-203ENST00000372920 PARP4Q9UKK3 1724 aaKnown RBP20.67■□□□□ 0.9
HNF4A-203ENST00000372920 ADAMTSL3P82987 1691 aa20.67■□□□□ 0.9
HNF4A-203ENST00000372920 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 ST5P78524 1137 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 MTF1Q14872 753 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 LDHAL6AQ6ZMR3 332 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 NUTM2AQ8IVF1 878 aaPredicted RBP20.66■□□□□ 0.9
HNF4A-203ENST00000372920 DIS3L2Q8IYB7 885 aaKnown RBP20.66■□□□□ 0.9
HNF4A-203ENST00000372920 NEK11Q8NG66 645 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 MRPL44Q9H9J2 332 aaKnown RBP20.66■□□□□ 0.9
HNF4A-203ENST00000372920 ECM29Q5VYK3 1845 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 MYH7P12883 1935 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 PDE6AP16499 860 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 SYNE4Q8N205 404 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 WWC3Q9ULE0 1092 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 IFIT3O14879 490 aaKnown RBP20.66■□□□□ 0.9
HNF4A-203ENST00000372920 LIFRP42702 1097 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 TRIM28Q13263 835 aaKnown RBP20.66■□□□□ 0.9
HNF4A-203ENST00000372920 NR1I3Q14994 352 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
HNF4A-203ENST00000372920 CCDC12Q8WUD4 166 aaPredicted RBP20.66■□□□□ 0.9
HNF4A-203ENST00000372920 GOLGA1Q92805 767 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 ZSWIM5Q9P217 1185 aa20.66■□□□□ 0.9
HNF4A-203ENST00000372920 ZNF142P52746 1687 aaPredicted RBP20.65■□□□□ 0.9
HNF4A-203ENST00000372920 SAFBQ15424 915 aaKnown RBP eCLIP20.65■□□□□ 0.92e-7■■■■□ 25.5
HNF4A-203ENST00000372920 ZBTB38Q8NAP3 1195 aaPredicted RBP20.65■□□□□ 0.9
HNF4A-203ENST00000372920 STRBPQ96SI9 672 aaKnown RBP20.65■□□□□ 0.9
HNF4A-203ENST00000372920 IRX2Q9BZI1 471 aaPredicted RBP20.65■□□□□ 0.9
HNF4A-203ENST00000372920 ZNF512BQ96KM6 892 aaPredicted RBP20.65■□□□□ 0.9
HNF4A-203ENST00000372920 TEX13AQ9BXU3 409 aaPredicted RBP20.65■□□□□ 0.9
HNF4A-203ENST00000372920 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
HNF4A-203ENST00000372920 IFNAR1P17181 557 aa20.65■□□□□ 0.9
HNF4A-203ENST00000372920 WASF1Q92558 559 aa20.65■□□□□ 0.9
HNF4A-203ENST00000372920 FUT8Q9BYC5 575 aa20.65■□□□□ 0.9
HNF4A-203ENST00000372920 UBR2Q8IWV8 1755 aa20.64■□□□□ 0.9
HNF4A-203ENST00000372920 SOWAHDA6NJG2 315 aa20.64■□□□□ 0.89
HNF4A-203ENST00000372920 CTDSPL2Q05D32 466 aa20.64■□□□□ 0.89
HNF4A-203ENST00000372920 TRIML1Q8N9V2 468 aa20.64■□□□□ 0.89
HNF4A-203ENST00000372920 AIDAQ96BJ3 306 aa20.64■□□□□ 0.89
HNF4A-203ENST00000372920 GREM2Q9H772 168 aa20.64■□□□□ 0.89
HNF4A-203ENST00000372920 TCRBV5S4A2TA0A5A2 114 aa20.64■□□□□ 0.89
HNF4A-203ENST00000372920 ITGA6P23229 1130 aa20.64■□□□□ 0.89
HNF4A-203ENST00000372920 PCDHB6Q9Y5E3 794 aa20.64■□□□□ 0.89
HNF4A-203ENST00000372920 ACTN4O43707 911 aaKnown RBP20.63■□□□□ 0.89
HNF4A-203ENST00000372920 CCDC175P0C221 793 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 RILPL1Q5EBL4 403 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 TBC1D2BQ9UPU7 963 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 TACC3Q9Y6A5 838 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 AKAP11Q9UKA4 1901 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 A0A1B0GTH6 734 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 AKR1B15C9JRZ8 316 aaPredicted RBP20.63■□□□□ 0.89
HNF4A-203ENST00000372920 TULP2O00295 520 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 TXLNAP40222 546 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 PLCD1P51178 756 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 CNNM1Q9NRU3 951 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 USP49Q70CQ1 688 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 TXLNBQ8N3L3 684 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 TTLL11Q8NHH1 800 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 FOXP1Q9H334 677 aaPredicted RBP20.63■□□□□ 0.89
HNF4A-203ENST00000372920 EPB41L4AQ9HCS5 686 aaPredicted RBP20.63■□□□□ 0.89
HNF4A-203ENST00000372920 LZTFL1Q9NQ48 299 aa20.63■□□□□ 0.89
HNF4A-203ENST00000372920 PHKA1P46020 1223 aa20.62■□□□□ 0.89
HNF4A-203ENST00000372920 NR5A1Q13285 461 aa20.62■□□□□ 0.89
HNF4A-203ENST00000372920 ZNF579Q8NAF0 562 aaKnown RBP20.62■□□□□ 0.89
HNF4A-203ENST00000372920 PANX2Q96RD6 677 aa20.62■□□□□ 0.89
HNF4A-203ENST00000372920 ZSWIM4Q9H7M6 989 aa20.62■□□□□ 0.89
HNF4A-203ENST00000372920 TEX33O43247 280 aa20.62■□□□□ 0.89
HNF4A-203ENST00000372920 ALX1Q15699 326 aa20.62■□□□□ 0.89
HNF4A-203ENST00000372920 VGLL2Q8N8G2 317 aa20.62■□□□□ 0.89
HNF4A-203ENST00000372920 IFNL3Q8IZI9 196 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 CCDC82Q8N4S0 544 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 SRPRBQ9Y5M8 271 aaKnown RBP20.61■□□□□ 0.89
HNF4A-203ENST00000372920 ATP2B1P20020 1258 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 ERCC5P28715 1186 aaPredicted RBP20.61■□□□□ 0.89
HNF4A-203ENST00000372920 LONRF2Q1L5Z9 754 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 RAD9BQ6WBX8 426 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 TRIM22Q8IYM9 498 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 SPATA20Q8TB22 786 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 NAPBQ9H115 298 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 KANK3Q6NY19 840 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 KIF6Q6ZMV9 814 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 APTXQ7Z2E3 356 aaKnown RBP20.61■□□□□ 0.89
HNF4A-203ENST00000372920 ADGRG1Q9Y653 693 aa20.61■□□□□ 0.89
HNF4A-203ENST00000372920 A0A0U1RQJ8 604 aa20.6■□□□□ 0.89
HNF4A-203ENST00000372920 PATL2C9JE40 543 aaKnown RBP20.6■□□□□ 0.89
HNF4A-203ENST00000372920 JAKMIP3Q5VZ66 844 aa20.6■□□□□ 0.89
HNF4A-203ENST00000372920 CMTR1Q8N1G2 835 aaKnown RBP20.6■□□□□ 0.89
HNF4A-203ENST00000372920 ATRIPQ8WXE1 791 aa20.6■□□□□ 0.89
HNF4A-203ENST00000372920 CSRNP2Q9H175 543 aa20.6■□□□□ 0.89
HNF4A-203ENST00000372920 CCDC151A5D8V7 595 aa20.6■□□□□ 0.89
HNF4A-203ENST00000372920 CHMP4BP1P59074 171 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms