RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CTDSPL2Q05D32 466 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 PNMA8AQ86V59 439 aaPredicted RBP14.2□□□□□ -0.14
USF1-203ENST00000368021 TRPM4Q8TD43 1214 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 DPF2Q92785 391 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 LRRC2Q9BYS8 371 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 ADARB2Q9NS39 739 aaKnown RBP14.2□□□□□ -0.14
USF1-203ENST00000368021 DAGLAQ9Y4D2 1042 aa14.2□□□□□ -0.14
USF1-203ENST00000368021 CDK5RAP2Q96SN8 1893 aa14.19□□□□□ -0.14
USF1-203ENST00000368021 MINDY4BA8MYZ0 360 aa14.19□□□□□ -0.14
USF1-203ENST00000368021 RPS12P25398 132 aaKnown RBP14.19□□□□□ -0.14
USF1-203ENST00000368021 USP5P45974 858 aa14.19□□□□□ -0.14
USF1-203ENST00000368021 NUCB2P80303 420 aa14.19□□□□□ -0.14
USF1-203ENST00000368021 AGBL3Q8NEM8 1001 aa14.19□□□□□ -0.14
USF1-203ENST00000368021 TEKT1Q969V4 418 aa14.19□□□□□ -0.14
USF1-203ENST00000368021 ZNF274Q96GC6 653 aaPredicted RBP14.19□□□□□ -0.14
USF1-203ENST00000368021 TMEM87BQ96K49 555 aa14.19□□□□□ -0.14
USF1-203ENST00000368021 SCN4AP35499 1836 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 B4E1Z4 1266 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 SLC3A2P08195 630 aaKnown RBP14.18□□□□□ -0.14
USF1-203ENST00000368021 USP17L8P0C7I0 530 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 HIRAP54198 1017 aaPredicted RBP14.18□□□□□ -0.14
USF1-203ENST00000368021 RAB3GAP1Q15042 981 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 MAP1SQ66K74 1059 aaPredicted RBP14.18□□□□□ -0.14
USF1-203ENST00000368021 CHST3Q7LGC8 479 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 CCDC83Q8IWF9 413 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 GTF3C6Q969F1 213 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 CHMP4CQ96CF2 233 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 TACC3Q9Y6A5 838 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 NAV1Q8NEY1 1877 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 FOCADQ5VW36 1801 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 MYO3BQ8WXR4 1341 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 PFKFB2O60825 505 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 ST3GAL1Q11201 340 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 CYB5R4Q7L1T6 521 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 AMOTL1Q8IY63 956 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 OGFOD1Q8N543 542 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 SMC1BQ8NDV3 1235 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 RBM46Q8TBY0 533 aaKnown RBP14.18□□□□□ -0.14
USF1-203ENST00000368021 GMLQ99445 158 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 MCM9Q9NXL9 1143 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 ZSWIM5Q9P217 1185 aa14.18□□□□□ -0.14
USF1-203ENST00000368021 ANGEL1Q9UNK9 670 aaKnown RBP14.18□□□□□ -0.14
USF1-203ENST00000368021 ROBO3Q96MS0 1386 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 DDX60LQ5H9U9 1706 aaKnown RBP14.17□□□□□ -0.14
USF1-203ENST00000368021 ORC4O43929 436 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 KDM4AO75164 1064 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 C12orf60Q5U649 245 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 USP50Q70EL3 339 aaPredicted RBP14.17□□□□□ -0.14
USF1-203ENST00000368021 LDHDQ86WU2 507 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 TGFBRAP1Q8WUH2 860 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 ESR2Q92731 530 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 ZDHHC15Q96MV8 337 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 SERPINA10Q9UK55 444 aa14.17□□□□□ -0.14
USF1-203ENST00000368021 SH2B2O14492 632 aaPredicted RBP14.16□□□□□ -0.14
USF1-203ENST00000368021 LIFRP42702 1097 aa14.16□□□□□ -0.14
USF1-203ENST00000368021 APOBRQ0VD83 1088 aa14.16□□□□□ -0.14
USF1-203ENST00000368021 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
USF1-203ENST00000368021 SGMS1Q86VZ5 419 aa14.16□□□□□ -0.14
USF1-203ENST00000368021 IGDCC4Q8TDY8 1250 aa14.16□□□□□ -0.14
USF1-203ENST00000368021 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
USF1-203ENST00000368021 SMC3Q9UQE7 1217 aa14.16□□□□□ -0.14
USF1-203ENST00000368021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
USF1-203ENST00000368021 FLT1P17948 1338 aa14.16□□□□□ -0.14
USF1-203ENST00000368021 CYP2D7A0A087X1C5 515 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 TPM2P07951 284 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 PDIA4P13667 645 aaKnown RBP14.15□□□□□ -0.14
USF1-203ENST00000368021 CRKP46108 304 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 PDE4BQ07343 736 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
USF1-203ENST00000368021 KIF4BQ2VIQ3 1234 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 APOBEC3HQ6NTF7 200 aaKnown RBP14.15□□□□□ -0.14
USF1-203ENST00000368021 NECAB1Q8N987 351 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 NKX2-3Q8TAU0 364 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 MAP7D2Q96T17 732 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 LLPHQ9BRT6 129 aaKnown RBP14.15□□□□□ -0.14
USF1-203ENST00000368021 MYOZ2Q9NPC6 264 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 SCAF8Q9UPN6 1271 aaKnown RBP14.15□□□□□ -0.14
USF1-203ENST00000368021 ASTN2O75129 1339 aaPredicted RBP14.15□□□□□ -0.14
USF1-203ENST00000368021 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
USF1-203ENST00000368021 PDCL3Q9H2J4 239 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 TOMM22Q9NS69 142 aa14.15□□□□□ -0.14
USF1-203ENST00000368021 ZNF280AP59817 542 aaPredicted RBP14.14□□□□□ -0.15
USF1-203ENST00000368021 PDE4CQ08493 712 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 SCRN1Q12765 414 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 STK3Q13188 491 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 NBPF9Q3BBW0 867 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 TMEM67Q5HYA8 995 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
USF1-203ENST00000368021 MAPKAPK5Q8IW41 473 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 TMTC2Q8N394 836 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 LY9Q9HBG7 655 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
USF1-203ENST00000368021 PCDHAC2Q9Y5I4 1007 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 MYH1P12882 1939 aa14.14□□□□□ -0.15
USF1-203ENST00000368021 SMIM22K7EJ46 135 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 IFIT3O14879 490 aaKnown RBP14.13□□□□□ -0.15
USF1-203ENST00000368021 CLCN1P35523 988 aa14.13□□□□□ -0.15
USF1-203ENST00000368021 RBM5P52756 815 aaKnown RBP eCLIP14.13□□□□□ -0.15
USF1-203ENST00000368021 FMR1Q06787 632 aaKnown RBP eCLIP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms