RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 A1BGP04217 495 aa20.07■□□□□ 0.8
SMG5-201ENST00000361813 KDRP35968 1356 aa20.07■□□□□ 0.8
SMG5-201ENST00000361813 ERCC3P19447 782 aa20.07■□□□□ 0.8
SMG5-201ENST00000361813 RBM5P52756 815 aaKnown RBP eCLIP20.07■□□□□ 0.8
SMG5-201ENST00000361813 GIGYF2Q6Y7W6 1299 aaKnown RBP20.06■□□□□ 0.8
SMG5-201ENST00000361813 TTC38Q5R3I4 469 aa20.06■□□□□ 0.8
SMG5-201ENST00000361813 NOSTRINQ8IVI9 506 aa20.06■□□□□ 0.8
SMG5-201ENST00000361813 SECISBP2LQ93073 1101 aaKnown RBP20.06■□□□□ 0.8
SMG5-201ENST00000361813 TSPY3P0CV98 308 aa20.06■□□□□ 0.8
SMG5-201ENST00000361813 TSPY8P0CW00 308 aa20.06■□□□□ 0.8
SMG5-201ENST00000361813 POLA2Q14181 598 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 SLC39A14Q15043 492 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 WHAMMP3Q1A5X7 153 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 PLA2G4DQ86XP0 818 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 ANKRD18AQ8IVF6 992 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 SELENOSQ9BQE4 189 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 PARD6BQ9BYG5 372 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 PLEKHA4Q9H4M7 779 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 CCDC152Q4G0S7 254 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 SRGAP1Q7Z6B7 1085 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 LRRC27Q9C0I9 530 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 VPS54Q9P1Q0 977 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 CDC23Q9UJX2 597 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 PDE4DQ08499 809 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 KLHL34Q8N239 644 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 CCDC155Q8N6L0 562 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 PHLPP2Q6ZVD8 1323 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 CARMIL3Q8ND23 1372 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 GNAQP50148 359 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 NELFBQ8WX92 580 aa20.05■□□□□ 0.8
SMG5-201ENST00000361813 TNNC1P63316 161 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 TSGA10Q9BZW7 698 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 ABCA8O94911 1581 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 GYS2P54840 703 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 SARM1Q6SZW1 724 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 IKBKBO14920 756 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 ATP8B1O43520 1251 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 ITGA6P23229 1130 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 TRMT1LQ7Z2T5 733 aaKnown RBP20.04■□□□□ 0.8
SMG5-201ENST00000361813 ZNF532Q9HCE3 1301 aa20.04■□□□□ 0.8
SMG5-201ENST00000361813 SASH1O94885 1247 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 RGS22Q8NE09 1264 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 POLR3EQ9NVU0 708 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 RRP15Q9Y3B9 282 aaKnown RBP20.03■□□□□ 0.8
SMG5-201ENST00000361813 OR8K1Q8NGG5 319 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 FCHSD1Q86WN1 690 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 UBLCP1Q8WVY7 318 aaPredicted RBP20.03■□□□□ 0.8
SMG5-201ENST00000361813 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 ZSCAN20P17040 1043 aaPredicted RBP20.03■□□□□ 0.8
SMG5-201ENST00000361813 LIG3P49916 1009 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 PPFIA1Q13136 1202 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 TOB2Q14106 344 aaPredicted RBP20.03■□□□□ 0.8
SMG5-201ENST00000361813 SLC35F6Q8N357 371 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 ANKS4BQ8N8V4 417 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 COPRSQ9NQ92 184 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 FAN1Q9Y2M0 1017 aa20.03■□□□□ 0.8
SMG5-201ENST00000361813 MAGEA1P43355 309 aa20.02■□□□□ 0.8
SMG5-201ENST00000361813 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
SMG5-201ENST00000361813 KRT13P13646 458 aa20.02■□□□□ 0.8
SMG5-201ENST00000361813 ACTN2P35609 894 aa20.02■□□□□ 0.8
SMG5-201ENST00000361813 CETN2P41208 172 aa20.02■□□□□ 0.8
SMG5-201ENST00000361813 CCDC51Q96ER9 411 aa20.02■□□□□ 0.8
SMG5-201ENST00000361813 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.8
SMG5-201ENST00000361813 LETM2Q2VYF4 491 aa20.02■□□□□ 0.8
SMG5-201ENST00000361813 COBLO75128 1261 aa20.02■□□□□ 0.79
SMG5-201ENST00000361813 BAG3O95817 575 aa20.02■□□□□ 0.79
SMG5-201ENST00000361813 CASP14P31944 242 aa20.02■□□□□ 0.79
SMG5-201ENST00000361813 LRRC24Q50LG9 513 aa20.02■□□□□ 0.79
SMG5-201ENST00000361813 ZCCHC17Q9NP64 241 aaKnown RBP20.02■□□□□ 0.79
SMG5-201ENST00000361813 KRT79Q5XKE5 535 aa20.01■□□□□ 0.79
SMG5-201ENST00000361813 FAM204AQ9H8W3 233 aa20.01■□□□□ 0.79
SMG5-201ENST00000361813 MCM9Q9NXL9 1143 aa20.01■□□□□ 0.79
SMG5-201ENST00000361813 PRAMEF22A3QJZ6 481 aa20.01■□□□□ 0.79
SMG5-201ENST00000361813 BCAS4Q8TDM0 211 aa20.01■□□□□ 0.79
SMG5-201ENST00000361813 RAPGEF1Q13905 1077 aa20.01■□□□□ 0.79
SMG5-201ENST00000361813 CPSF1Q10570 1443 aaKnown RBP20.01■□□□□ 0.79
SMG5-201ENST00000361813 CCDC151A5D8V7 595 aa20■□□□□ 0.79
SMG5-201ENST00000361813 CRACR2BQ8N4Y2 399 aaPredicted RBP20■□□□□ 0.79
SMG5-201ENST00000361813 EEF2KMTQ96G04 330 aa20■□□□□ 0.79
SMG5-201ENST00000361813 TRAF5O00463 557 aa20■□□□□ 0.79
SMG5-201ENST00000361813 GNGT1P63211 74 aa20■□□□□ 0.79
SMG5-201ENST00000361813 TMEM132AQ24JP5 1023 aa20■□□□□ 0.79
SMG5-201ENST00000361813 GJB4Q9NTQ9 266 aa20■□□□□ 0.79
SMG5-201ENST00000361813 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
SMG5-201ENST00000361813 ENC1O14682 589 aa20■□□□□ 0.79
SMG5-201ENST00000361813 FAM71BQ8TC56 605 aa20■□□□□ 0.79
SMG5-201ENST00000361813 FERMT2Q96AC1 680 aa20■□□□□ 0.79
SMG5-201ENST00000361813 GPHNQ9NQX3 736 aaPredicted RBP20■□□□□ 0.79
SMG5-201ENST00000361813 RBM28Q9NW13 759 aaKnown RBP20■□□□□ 0.79
SMG5-201ENST00000361813 SPATA1Q5VX52 437 aa20■□□□□ 0.79
SMG5-201ENST00000361813 CERS3Q8IU89 383 aa20■□□□□ 0.79
SMG5-201ENST00000361813 IFT20Q8IY31 132 aa20■□□□□ 0.79
SMG5-201ENST00000361813 C6orf50Q9HD87 102 aa20■□□□□ 0.79
SMG5-201ENST00000361813 EIF2AK3Q9NZJ5 1116 aaKnown RBP20■□□□□ 0.79
SMG5-201ENST00000361813 IGSF1Q8N6C5 1336 aa19.99■□□□□ 0.79
SMG5-201ENST00000361813 PLCD1P51178 756 aa19.99■□□□□ 0.79
SMG5-201ENST00000361813 CETN1Q12798 172 aa19.99■□□□□ 0.79
SMG5-201ENST00000361813 SF3A3Q12874 501 aaKnown RBP eCLIP19.99■□□□□ 0.797e-7■■■■□ 19.4
SMG5-201ENST00000361813 KIF23Q02241 960 aaPredicted RBP19.99■□□□□ 0.79
SMG5-201ENST00000361813 NSRP1Q9H0G5 558 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms