RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SCLYQ96I15 445 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 PTCH2Q9Y6C5 1203 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 COMMD10Q9Y6G5 202 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 RGPD1P0DJD0 1748 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 WNT7AO00755 349 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 ATP4AP20648 1035 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 THBS2P35442 1172 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 HTRA4P83105 476 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 ROR1Q01973 937 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 FAAP100Q0VG06 881 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 EML3Q32P44 896 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 HABP4Q5JVS0 413 aaKnown RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 C16orf46Q6P387 395 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 SAPCD2Q86UD0 394 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 TRIM42Q8IWZ5 723 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 PJA1Q8NG27 643 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 NKX2-3Q8TAU0 364 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 MRGPRX3Q96LB0 322 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 USB1Q9BQ65 265 aaKnown RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 STRN4Q9NRL3 753 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 MRPS23Q9Y3D9 190 aaKnown RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 ABCC3O15438 1527 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 DNAJC25-GNG10A0A024R161 153 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 PPP1R12AO14974 1030 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 RAB27AP51159 221 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 LMNB2Q03252 620 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 ZFYVE27Q5T4F4 411 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 IER5Q5VY09 327 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 ABHD17CQ6PCB6 329 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 FANCLQ9NW38 375 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 FBXO9Q9UK97 447 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 PRDM4Q9UKN5 801 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 FYCO1Q9BQS8 1478 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 MST1RQ04912 1400 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 EPB41L2O43491 1005 aaKnown RBP2.57□□□□□ -2
SMARCAD1-202ENST00000359052 A1BGP04217 495 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 ANAPC15P60006 121 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 CMTR2Q8IYT2 770 aaKnown RBP2.57□□□□□ -2
SMARCAD1-202ENST00000359052 PLSCR4Q9NRQ2 329 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 LAMB4A4D0S4 1761 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 DHHO43323 396 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 ADD2P35612 726 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 KIAA0319LQ8IZA0 1049 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 KRT78Q8N1N4 520 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 KLHL23Q8NBE8 558 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 SEZ6LQ9BYH1 1024 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 SRCIN1Q9C0H9 1055 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 OBP2AQ9NY56 170 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 ARHGEF28Q8N1W1 1705 aaKnown RBP2.57□□□□□ -2
SMARCAD1-202ENST00000359052 ROBO2Q9HCK4 1378 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 ASXL1Q8IXJ9 1541 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 WIPF3A6NGB9 483 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 TBX3O15119 743 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 TCEA3O75764 348 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 GJB6O95452 261 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 MAP3K11Q16584 847 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 SYCP2LQ5T4T6 812 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 SWSAP1Q6NVH7 229 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 ZCRB1Q8TBF4 217 aaKnown RBP2.57□□□□□ -2
SMARCAD1-202ENST00000359052 PRDM13Q9H4Q3 707 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 AKAP2Q9Y2D5 859 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 hCG_2014768A0A024R1R8 64 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 EFSO43281 561 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 LDHCP07864 332 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 HCLS1P14317 486 aaPredicted RBP2.57□□□□□ -2
SMARCAD1-202ENST00000359052 NEK2P51955 445 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 PLCB3Q01970 1234 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 PABPC4Q13310 644 aaKnown RBP eCLIP2.57□□□□□ -2
SMARCAD1-202ENST00000359052 GRIP2Q9C0E4 1043 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 MTMR10Q9NXD2 777 aa2.57□□□□□ -2
SMARCAD1-202ENST00000359052 A0A1W2PQH9 124 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 LCE2BO14633 110 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 TNFRSF10CO14798 259 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 SCG5P05408 212 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 TNFRSF8P28908 595 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 AGFG1P52594 562 aaKnown RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 LCE2AQ5TA79 106 aaPredicted RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 ANKS3Q6ZW76 656 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 GALNT5Q7Z7M9 940 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 ANKRD23Q86SG2 305 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 TMEM102Q8N9M5 508 aaPredicted RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 HCN4Q9Y3Q4 1203 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 PAPPAQ13219 1627 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 FHOD3Q2V2M9 1422 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 TGM5O43548 720 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 VAMP4O75379 141 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 PAGE1O75459 146 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 ZC3H12AQ5D1E8 599 aaKnown RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 TMEM67Q5HYA8 995 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 SLC27A3Q5K4L6 730 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 ODR4Q5SWX8 454 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 MENTQ9BUN1 341 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 OPA1O60313 960 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 LDHAP00338 332 aaKnown RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 ASGR2P07307 311 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 SMTNP53814 917 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 SCARF1Q14162 830 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 SHROOM1Q2M3G4 852 aaPredicted RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 WFDC3Q8IUB2 231 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 VWA5B2Q8N398 1253 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms