RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 DENND2AQ9ULE3 1009 aa27.06■■□□□ 1.92
NPAS3-203ENST00000357798 PRR29P0C7W0 189 aa27.06■■□□□ 1.92
NPAS3-203ENST00000357798 KANK3Q6NY19 840 aa27.06■■□□□ 1.92
NPAS3-203ENST00000357798 ADGRG1Q9Y653 693 aa27.06■■□□□ 1.92
NPAS3-203ENST00000357798 TRMT44Q8IYL2 757 aaKnown RBP27.05■■□□□ 1.92
NPAS3-203ENST00000357798 ANKZF1Q9H8Y5 726 aa27.05■■□□□ 1.92
NPAS3-203ENST00000357798 SERTAD1Q9UHV2 236 aa27.05■■□□□ 1.92
NPAS3-203ENST00000357798 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
NPAS3-203ENST00000357798 MTF1Q14872 753 aa27.05■■□□□ 1.92
NPAS3-203ENST00000357798 CT47A1Q5JQC4 288 aaPredicted RBP27.05■■□□□ 1.92
NPAS3-203ENST00000357798 WASF1Q92558 559 aa27.05■■□□□ 1.92
NPAS3-203ENST00000357798 FAM217BQ9NTX9 383 aaPredicted RBP27.05■■□□□ 1.92
NPAS3-203ENST00000357798 ADD2P35612 726 aa27.04■■□□□ 1.92
NPAS3-203ENST00000357798 BEND6Q5SZJ8 279 aaPredicted RBP27.04■■□□□ 1.92
NPAS3-203ENST00000357798 HDXQ7Z353 690 aa27.04■■□□□ 1.92
NPAS3-203ENST00000357798 ZNF579Q8NAF0 562 aaKnown RBP27.04■■□□□ 1.92
NPAS3-203ENST00000357798 IGDCC4Q8TDY8 1250 aa27.04■■□□□ 1.92
NPAS3-203ENST00000357798 TEX13AQ9BXU3 409 aaPredicted RBP27.04■■□□□ 1.92
NPAS3-203ENST00000357798 AKAP11Q9UKA4 1901 aa27.04■■□□□ 1.92
NPAS3-203ENST00000357798 KIF5CO60282 957 aa27.04■■□□□ 1.92
NPAS3-203ENST00000357798 SSRP1Q08945 709 aaKnown RBP27.04■■□□□ 1.92
NPAS3-203ENST00000357798 NKX2-3Q8TAU0 364 aa27.04■■□□□ 1.92
NPAS3-203ENST00000357798 MED15Q96RN5 788 aa27.04■■□□□ 1.92
NPAS3-203ENST00000357798 SAMSN1Q9NSI8 373 aaKnown RBP27.04■■□□□ 1.92
NPAS3-203ENST00000357798 COL18A1P39060 1754 aa27.04■■□□□ 1.92
NPAS3-203ENST00000357798 SOWAHDA6NJG2 315 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 POLR2DO15514 142 aaKnown RBP27.03■■□□□ 1.92
NPAS3-203ENST00000357798 LMAN1P49257 510 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 SPECC1Q5M775 1068 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 ANKLE2Q86XL3 938 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 LY9Q9HBG7 655 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 SENP2Q9HC62 589 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 VGLL3A8MV65 326 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 ERLIN1O75477 346 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 UBR2Q8IWV8 1755 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 FMNL1O95466 1100 aaPredicted RBP27.03■■□□□ 1.92
NPAS3-203ENST00000357798 ACTN2P35609 894 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 NFXL1Q6ZNB6 911 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 SPATA20Q8TB22 786 aa27.03■■□□□ 1.92
NPAS3-203ENST00000357798 B4E1Z4 1266 aa27.02■■□□□ 1.92
NPAS3-203ENST00000357798 TOB1P50616 345 aaPredicted RBP27.02■■□□□ 1.92
NPAS3-203ENST00000357798 SAFBQ15424 915 aaKnown RBP eCLIP27.02■■□□□ 1.92
NPAS3-203ENST00000357798 ZNF827Q17R98 1081 aa27.02■■□□□ 1.92
NPAS3-203ENST00000357798 RAD9BQ6WBX8 426 aa27.02■■□□□ 1.92
NPAS3-203ENST00000357798 TRIM34Q9BYJ4 488 aa27.02■■□□□ 1.92
NPAS3-203ENST00000357798 IRX2Q9BZI1 471 aaPredicted RBP27.02■■□□□ 1.92
NPAS3-203ENST00000357798 EIF3JO75822 258 aaKnown RBP27.02■■□□□ 1.92
NPAS3-203ENST00000357798 GYS2P54840 703 aa27.02■■□□□ 1.92
NPAS3-203ENST00000357798 PPFIBP1Q86W92 1011 aa27.02■■□□□ 1.92
NPAS3-203ENST00000357798 SLC26A6Q9BXS9 759 aa27.02■■□□□ 1.92
NPAS3-203ENST00000357798 NID2Q14112 1375 aa27.02■■□□□ 1.92
NPAS3-203ENST00000357798 LRP6O75581 1613 aa27.01■■□□□ 1.91
NPAS3-203ENST00000357798 MMP1P03956 469 aa27.01■■□□□ 1.91
NPAS3-203ENST00000357798 RILPL1Q5EBL4 403 aa27.01■■□□□ 1.91
NPAS3-203ENST00000357798 PI16Q6UXB8 463 aa27.01■■□□□ 1.91
NPAS3-203ENST00000357798 APTXQ7Z2E3 356 aaKnown RBP27.01■■□□□ 1.91
NPAS3-203ENST00000357798 RASSF4Q9H2L5 321 aa27.01■■□□□ 1.91
NPAS3-203ENST00000357798 ZBTB3Q9H5J0 574 aa27.01■■□□□ 1.91
NPAS3-203ENST00000357798 LZTFL1Q9NQ48 299 aa27.01■■□□□ 1.91
NPAS3-203ENST00000357798 ACTN4O43707 911 aaKnown RBP27.01■■□□□ 1.91
NPAS3-203ENST00000357798 LIFRP42702 1097 aa27.01■■□□□ 1.91
NPAS3-203ENST00000357798 SLC9C2Q5TAH2 1124 aa27■■□□□ 1.91
NPAS3-203ENST00000357798 RASGRP2Q7LDG7 609 aa27■■□□□ 1.91
NPAS3-203ENST00000357798 ZSWIM4Q9H7M6 989 aa27■■□□□ 1.91
NPAS3-203ENST00000357798 TAOK2Q9UL54 1235 aa27■■□□□ 1.91
NPAS3-203ENST00000357798 PBX1P40424 430 aa27■■□□□ 1.91
NPAS3-203ENST00000357798 GRIN1Q05586 938 aa27■■□□□ 1.91
NPAS3-203ENST00000357798 TMEM67Q5HYA8 995 aa27■■□□□ 1.91
NPAS3-203ENST00000357798 FOXP1Q9H334 677 aaPredicted RBP27■■□□□ 1.91
NPAS3-203ENST00000357798 PDE11AQ9HCR9 933 aa27■■□□□ 1.91
NPAS3-203ENST00000357798 MYO5AQ9Y4I1 1855 aaKnown RBP26.99■■□□□ 1.91
NPAS3-203ENST00000357798 IFNAR1P17181 557 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 IGSF22Q8N9C0 903 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 PUF60Q9UHX1 559 aaKnown RBP26.99■■□□□ 1.91
NPAS3-203ENST00000357798 WDR17Q8IZU2 1322 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 BTBD18B2RXH4 712 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 MYO1CO00159 1063 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 UBE3CQ15386 1083 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 SPATA1Q5VX52 437 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 DIS3L2Q8IYB7 885 aaKnown RBP26.99■■□□□ 1.91
NPAS3-203ENST00000357798 ISCA1Q9BUE6 129 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 SRPRBQ9Y5M8 271 aaKnown RBP26.99■■□□□ 1.91
NPAS3-203ENST00000357798 RIC1Q4ADV7 1423 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 CHD4Q14839 1912 aa26.99■■□□□ 1.91
NPAS3-203ENST00000357798 MCAMP43121 646 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 RBL2Q08999 1139 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 TTF1Q15361 905 aaPredicted RBP26.98■■□□□ 1.91
NPAS3-203ENST00000357798 PNKPQ96T60 521 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 L1RE1Q9UN81 338 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 TEX33O43247 280 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 IVLP07476 585 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 FECHP22830 423 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 CCDC51Q96ER9 411 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 ZNF512BQ96KM6 892 aaPredicted RBP26.98■■□□□ 1.91
NPAS3-203ENST00000357798 ADAMTSL3P82987 1691 aa26.98■■□□□ 1.91
NPAS3-203ENST00000357798 LEKR1Q6ZMV7 388 aa26.97■■□□□ 1.91
NPAS3-203ENST00000357798 GRAMD1CQ8IYS0 662 aa26.97■■□□□ 1.91
NPAS3-203ENST00000357798 GBP3Q9H0R5 595 aa26.97■■□□□ 1.91
NPAS3-203ENST00000357798 CEP131Q9UPN4 1083 aa26.97■■□□□ 1.91
NPAS3-203ENST00000357798 TBC1D2BQ9UPU7 963 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms