RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 KRI1Q8N9T8 703 aaKnown RBP20.33■□□□□ 0.85
GYPC-202ENST00000356887 DPF2Q92785 391 aa20.33■□□□□ 0.85
GYPC-202ENST00000356887 SNAP23O00161 211 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 PRKAB2O43741 272 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 NRDCO43847 1150 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 MMP1P03956 469 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 GUCY1A2P33402 732 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 TOB1P50616 345 aaPredicted RBP20.33■□□□□ 0.84
GYPC-202ENST00000356887 UBASH3AP57075 661 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 OLFM4Q6UX06 510 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 STK11IPQ8N1F8 1099 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 CNNM3Q8NE01 707 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 STAG1Q8WVM7 1258 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 THRAP3Q9Y2W1 955 aaKnown RBP20.33■□□□□ 0.84
GYPC-202ENST00000356887 PCDHA5Q9Y5H7 936 aa20.33■□□□□ 0.84
GYPC-202ENST00000356887 BTBD18B2RXH4 712 aa20.32■□□□□ 0.84
GYPC-202ENST00000356887 SLU7O95391 586 aaKnown RBP20.32■□□□□ 0.84
GYPC-202ENST00000356887 GNAT2P19087 354 aa20.32■□□□□ 0.84
GYPC-202ENST00000356887 PNPLA7Q6ZV29 1317 aa20.32■□□□□ 0.84
GYPC-202ENST00000356887 TUBB4AP04350 444 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 SUSD4Q5VX71 490 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 FNBP4Q8N3X1 1017 aaPredicted RBP20.31■□□□□ 0.84
GYPC-202ENST00000356887 L2HGDHQ9H9P8 463 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 SERPINC1P01008 464 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 SAFBQ15424 915 aaKnown RBP eCLIP20.31■□□□□ 0.84
GYPC-202ENST00000356887 RTN1Q16799 776 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 LCORLQ8N3X6 602 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 MTA3Q9BTC8 594 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 NACAP1Q9BZK3 213 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 TMX1Q9H3N1 280 aa20.31■□□□□ 0.84
GYPC-202ENST00000356887 BMP6P22004 513 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 MEX3CQ5U5Q3 659 aaKnown RBP20.3■□□□□ 0.84
GYPC-202ENST00000356887 VSTM4Q8IW00 320 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 DIS3L2Q8IYB7 885 aaKnown RBP20.3■□□□□ 0.84
GYPC-202ENST00000356887 MPHOSPH8Q99549 860 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 FOXP1Q9H334 677 aaPredicted RBP20.3■□□□□ 0.84
GYPC-202ENST00000356887 SEC31BQ9NQW1 1179 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 DDX41Q9UJV9 622 aaKnown RBP20.3■□□□□ 0.84
GYPC-202ENST00000356887 SLC4A4Q9Y6R1 1079 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 EXOC5O00471 708 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 PTPREP23469 700 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 PDE4BQ07343 736 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 WTAPQ15007 396 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 TRIM22Q8IYM9 498 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 CRACR2BQ8N4Y2 399 aaPredicted RBP20.3■□□□□ 0.84
GYPC-202ENST00000356887 ZNF397Q8NF99 534 aaPredicted RBP20.3■□□□□ 0.84
GYPC-202ENST00000356887 FANCLQ9NW38 375 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 FBXO2Q9UK22 296 aaPredicted RBP20.3■□□□□ 0.84
GYPC-202ENST00000356887 KCNJ14Q9UNX9 436 aa20.3■□□□□ 0.84
GYPC-202ENST00000356887 BCORQ6W2J9 1755 aa20.29■□□□□ 0.84
GYPC-202ENST00000356887 FOXN1O15353 648 aa20.29■□□□□ 0.84
GYPC-202ENST00000356887 TDO2P48775 406 aa20.29■□□□□ 0.84
GYPC-202ENST00000356887 BCAMP50895 628 aa20.29■□□□□ 0.84
GYPC-202ENST00000356887 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
GYPC-202ENST00000356887 SART3Q15020 963 aaKnown RBP20.29■□□□□ 0.84
GYPC-202ENST00000356887 CCDC93Q567U6 631 aa20.29■□□□□ 0.84
GYPC-202ENST00000356887 RRP12Q5JTH9 1297 aaKnown RBP20.29■□□□□ 0.84
GYPC-202ENST00000356887 SYT10Q6XYQ8 523 aa20.29■□□□□ 0.84
GYPC-202ENST00000356887 ZKSCAN3Q9BRR0 538 aa20.29■□□□□ 0.84
GYPC-202ENST00000356887 CDCA7Q9BWT1 371 aaPredicted RBP20.29■□□□□ 0.84
GYPC-202ENST00000356887 GTPBP4Q9BZE4 634 aaKnown RBP20.29■□□□□ 0.84
GYPC-202ENST00000356887 VPS72Q15906 364 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 CFAP100Q494V2 611 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 RILPL1Q5EBL4 403 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 SPECC1Q5M775 1068 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 TMTC2Q8N394 836 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 SYTL4Q96C24 671 aaPredicted RBP20.28■□□□□ 0.84
GYPC-202ENST00000356887 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.28■□□□□ 0.84
GYPC-202ENST00000356887 HOOK1Q9UJC3 728 aaKnown RBP20.28■□□□□ 0.84
GYPC-202ENST00000356887 USP21Q9UK80 565 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 V9GYY5 206 aaPredicted RBP20.28■□□□□ 0.84
GYPC-202ENST00000356887 CCP110O43303 1012 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 DEXIO95424 95 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 RCAN1P53805 252 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 GRIN1Q05586 938 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
GYPC-202ENST00000356887 MAN1B1Q9UKM7 699 aa20.28■□□□□ 0.84
GYPC-202ENST00000356887 MORC2Q9Y6X9 1032 aaPredicted RBP20.28■□□□□ 0.84
GYPC-202ENST00000356887 KMT5BQ4FZB7 885 aa20.27■□□□□ 0.84
GYPC-202ENST00000356887 NT5DC1Q5TFE4 455 aa20.27■□□□□ 0.84
GYPC-202ENST00000356887 BARGINQ6ZT62 677 aa20.27■□□□□ 0.84
GYPC-202ENST00000356887 ZNF579Q8NAF0 562 aaKnown RBP20.27■□□□□ 0.84
GYPC-202ENST00000356887 CCDC196A0A1B0GTZ2 297 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 ERICH2A1L162 156 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 TMEM232C9JQI7 657 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 SARSP49591 514 aaKnown RBP20.26■□□□□ 0.83
GYPC-202ENST00000356887 ELF2Q15723 593 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 INTS5Q6P9B9 1019 aaKnown RBP20.26■□□□□ 0.83
GYPC-202ENST00000356887 FBXO41Q8TF61 875 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 TOMM22Q9NS69 142 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 POSTNQ15063 836 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 DDB1Q16531 1140 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 FANCBQ8NB91 859 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 RNF41Q9H4P4 317 aaPredicted RBP20.26■□□□□ 0.83
GYPC-202ENST00000356887 INTS13Q9NVM9 706 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 SERTAD1Q9UHV2 236 aa20.26■□□□□ 0.83
GYPC-202ENST00000356887 TOP1P11387 765 aaKnown RBP20.25■□□□□ 0.83
GYPC-202ENST00000356887 ETF1P62495 437 aaKnown RBP20.25■□□□□ 0.83
GYPC-202ENST00000356887 CCDC152Q4G0S7 254 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms