RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TRAPPC3LQ5T215 181 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 HHIPL1Q96JK4 782 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 EHD2Q9NZN4 543 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 ATRXP46100 2492 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 PRDM1O75626 825 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 SEC31AO94979 1220 aaKnown RBP6.75□□□□□ -1.33
CD47-201ENST00000355354 CSB-PGBD3P0DP91 1061 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 LONRF3Q496Y0 759 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 ARMCX5Q6P1M9 558 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 APTXQ7Z2E3 356 aaKnown RBP6.75□□□□□ -1.33
CD47-201ENST00000355354 TRMT44Q8IYL2 757 aaKnown RBP6.75□□□□□ -1.33
CD47-201ENST00000355354 TMEM130Q8N3G9 435 aa6.75□□□□□ -1.33
CD47-201ENST00000355354 RANBP6O60518 1105 aaKnown RBP6.74□□□□□ -1.33
CD47-201ENST00000355354 TEFQ10587 303 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 CST9Q5W186 159 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 ZBED3Q96IU2 234 aaPredicted RBP6.74□□□□□ -1.33
CD47-201ENST00000355354 WDR24Q96S15 920 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 ZNF330Q9Y3S2 320 aaPredicted RBP6.74□□□□□ -1.33
CD47-201ENST00000355354 SEC16AO15027 2179 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 RAD50Q92878 1312 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 DOCK6Q96HP0 2047 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 PDE6BP35913 854 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 TOB1P50616 345 aaPredicted RBP6.74□□□□□ -1.33
CD47-201ENST00000355354 FMR1Q06787 632 aaKnown RBP eCLIP6.74□□□□□ -1.33
CD47-201ENST00000355354 TMEM139Q8IV31 216 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 CFHR5Q9BXR6 569 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 CBX8Q9HC52 389 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 BABAM1Q9NWV8 329 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 BCS1LQ9Y276 419 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 ZNFX1Q9P2E3 1918 aaKnown RBP6.74□□□□□ -1.33
CD47-201ENST00000355354 M0R2C6 588 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 MARCKSP29966 332 aaPredicted RBP6.74□□□□□ -1.33
CD47-201ENST00000355354 NPY5RQ15761 445 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 C9orf131Q5VYM1 1079 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 CYB5R4Q7L1T6 521 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 ENGASEQ8NFI3 743 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 RTCBQ9Y3I0 505 aaKnown RBP6.74□□□□□ -1.33
CD47-201ENST00000355354 ERVV-1B6SEH8 477 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 FOXO4P98177 505 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 TEX13AQ9BXU3 409 aaPredicted RBP6.74□□□□□ -1.33
CD47-201ENST00000355354 CREBZFQ9NS37 354 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 DOCK3Q8IZD9 2030 aa6.74□□□□□ -1.33
CD47-201ENST00000355354 TRIM66O15016 1216 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 RAB11FIP3O75154 756 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 LMBR1LQ6UX01 489 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 AK7Q96M32 723 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 VPS33BQ9H267 617 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 COL1A1P02452 1464 aaPredicted RBP6.73□□□□□ -1.33
CD47-201ENST00000355354 PLEKHO1Q53GL0 409 aaPredicted RBP6.73□□□□□ -1.33
CD47-201ENST00000355354 DESI2Q9BSY9 194 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 WBP1LQ9NX94 342 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.73□□□□□ -1.33
CD47-201ENST00000355354 CEP295Q9C0D2 2601 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 SLC27A2O14975 620 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 PRR29P0C7W0 189 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 GTF2E1P29083 439 aaPredicted RBP6.73□□□□□ -1.33
CD47-201ENST00000355354 ERCC6LQ2NKX8 1250 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.73□□□□□ -1.33
CD47-201ENST00000355354 MAP4K1Q92918 833 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 ZSWIM4Q9H7M6 989 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 STAP2Q9UGK3 403 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 FZD1Q9UP38 647 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 PP2D1A8MPX8 630 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 TEX33O43247 280 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 NDUFA8P51970 172 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 ALDH1L2Q3SY69 923 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 CREB3L3Q68CJ9 461 aa6.73□□□□□ -1.33
CD47-201ENST00000355354 PTPRSQ13332 1948 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 RCCD1A6NED2 376 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 CD44P16070 742 aaKnown RBP6.72□□□□□ -1.33
CD47-201ENST00000355354 MRE11P49959 708 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 FBXO38Q6PIJ6 1188 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 FILIP1Q7Z7B0 1213 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 ZSCAN30Q86W11 494 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 PIBF1Q8WXW3 757 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 TMEM51Q9NW97 253 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 PIM2Q9P1W9 311 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 CDC45O75419 566 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 MYBL2P10244 700 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 LMNB1P20700 586 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 TBC1D10CQ8IV04 446 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 FGFBP2Q9BYJ0 223 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 CCZ1BP86790 482 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 CCZ1P86791 482 aaPredicted RBP6.72□□□□□ -1.33
CD47-201ENST00000355354 SF3A3Q12874 501 aaKnown RBP eCLIP6.72□□□□□ -1.33
CD47-201ENST00000355354 LRSAM1Q6UWE0 723 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 GMLQ99445 158 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 MAPK8IP1Q9UQF2 711 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 F5P12259 2224 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 ZNF530Q6P9A1 599 aaPredicted RBP6.72□□□□□ -1.33
CD47-201ENST00000355354 CCDC155Q8N6L0 562 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 PPP1R1BQ9UD71 204 aaPredicted RBP6.72□□□□□ -1.33
CD47-201ENST00000355354 TBC1D2BQ9UPU7 963 aa6.72□□□□□ -1.33
CD47-201ENST00000355354 SPAG17Q6Q759 2223 aa6.71□□□□□ -1.33
CD47-201ENST00000355354 SERPINB2P05120 415 aa6.71□□□□□ -1.33
CD47-201ENST00000355354 HSP90AA2PQ14568 343 aaPredicted RBP6.71□□□□□ -1.33
CD47-201ENST00000355354 AXDND1Q5T1B0 1012 aaPredicted RBP6.71□□□□□ -1.33
CD47-201ENST00000355354 EPB41L4AQ9HCS5 686 aaPredicted RBP6.71□□□□□ -1.33
CD47-201ENST00000355354 CDHR2Q9BYE9 1310 aa6.71□□□□□ -1.33
CD47-201ENST00000355354 NEURL1BA8MQ27 555 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms