RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 IL25Q9H293 177 aa13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 DCTPP1Q9H773 170 aa13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 DNAAF2Q9NVR5 837 aaKnown RBP13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 EID1Q9Y6B2 187 aa13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 MPRIPQ6WCQ1 1025 aa13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 MPHOSPH8Q99549 860 aa13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 TFIP11Q9UBB9 837 aaKnown RBP13.76□□□□□ -0.21
CTNNB1-201ENST00000349496 VIRMAQ69YN4 1812 aaKnown RBP13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 PHLPP2Q6ZVD8 1323 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 SPDYE3A6NKU9 549 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 PPFIA3O75145 1194 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 IRAK1P51617 712 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 CCDC57Q2TAC2 916 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 TTC22Q5TAA0 569 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 EHD4Q9H223 541 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 E2F6O75461 281 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 USP5P45974 858 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 FOXD4Q12950 439 aaPredicted RBP13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 PRPF40BQ6NWY9 871 aaKnown RBP13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 TMCO5AQ8N6Q1 288 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 RBM41Q96IZ5 413 aaKnown RBP13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 ITM2BQ9Y287 266 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 CYP11B2P19099 503 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 STIM1Q13586 685 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 HOOK2Q96ED9 719 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 SPATA32Q96LK8 384 aa13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 BZW2Q9Y6E2 419 aaKnown RBP13.75□□□□□ -0.21
CTNNB1-201ENST00000349496 GOLGA6L10A0A0M3HER8 536 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 KIF5CO60282 957 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 OPA1O60313 960 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 UPP2O95045 317 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 SMTNP53814 917 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 DDX19AQ9NUU7 478 aaKnown RBP13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 F13A1P00488 732 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 PPP1R7Q15435 360 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 ANKRD44Q8N8A2 993 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.74□□□□□ -0.213e-7■■■■□ 19.4
CTNNB1-201ENST00000349496 PALD1Q9ULE6 856 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 RIMS1Q86UR5 1692 aaKnown RBP13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 ATP1A2P50993 1020 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 CCDC93Q567U6 631 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 CYB5D1Q6P9G0 228 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 DZIP3Q86Y13 1208 aaKnown RBP13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 AOPEPQ8N6M6 819 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 CXorf38Q8TB03 319 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 ABTB1Q969K4 478 aaPredicted RBP13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 GORASP1Q9BQQ3 440 aa13.74□□□□□ -0.21
CTNNB1-201ENST00000349496 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 LSM1O15116 133 aaKnown RBP13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 FLIIQ13045 1269 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 GALNT17Q6IS24 598 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 CUL5Q93034 780 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 ATP7BP35670 1465 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 CTAGE15A4D2H0 777 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 CTAGE8P0CG41 777 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 PCK1P35558 622 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 PPFIA1Q13136 1202 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 CTAGE6Q86UF2 777 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 CTAGE4Q8IX94 777 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 ZMAT2Q96NC0 199 aaKnown RBP13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 PPP1R12CQ9BZL4 782 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 TAOK3Q9H2K8 898 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 SLC39A2Q9NP94 309 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 USP32Q8NFA0 1604 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 ZNF202O95125 648 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 CPA1P15085 419 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 ZNF24P17028 368 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 CCDC13Q8IYE1 715 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 RMDN2Q96LZ7 410 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 HAUS2Q9NVX0 235 aa13.73□□□□□ -0.21
CTNNB1-201ENST00000349496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.215e-6■□□□□ 9.7
CTNNB1-201ENST00000349496 AIMP1Q12904 312 aaKnown RBP13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 CUL4BQ13620 913 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 WLSQ5T9L3 541 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 HIBCHQ6NVY1 386 aaPredicted RBP13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 OR8K1Q8NGG5 319 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 TEKT4Q8WW24 435 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 DHX58Q96C10 678 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 IFNKQ9P0W0 207 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 RABL2AQ9UBK7 228 aaPredicted RBP13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 KRT38O76015 456 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 SERPINC1P01008 464 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 HDGFP51858 240 aaKnown RBP13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 SLC7A5Q01650 507 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 SDF4Q9BRK5 362 aa13.72□□□□□ -0.21
CTNNB1-201ENST00000349496 HNRNPCP07910 306 aaKnown RBP eCLIP13.72□□□□□ -0.211e-8■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 1677.7 ms