RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 MFSD6Q6ZSS7 791 aa16.75■□□□□ 0.27
ARHGEF1-202ENST00000347545 CNNM2Q9H8M5 875 aa16.75■□□□□ 0.27
ARHGEF1-202ENST00000347545 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
ARHGEF1-202ENST00000347545 FBXO2Q9UK22 296 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF1-202ENST00000347545 PCDHA5Q9Y5H7 936 aa16.75■□□□□ 0.27
ARHGEF1-202ENST00000347545 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 SCN7AQ01118 1682 aa16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 TMEM232C9JQI7 657 aa16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 MYL5Q02045 173 aa16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 MIGA1Q8NAN2 632 aa16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.74■□□□□ 0.277e-6■■□□□ 11.8
ARHGEF1-202ENST00000347545 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 V9GYY5 206 aaPredicted RBP16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 DMTNQ08495 405 aa16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 DIS3L2Q8IYB7 885 aaKnown RBP16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 KRT23Q9C075 422 aa16.74■□□□□ 0.27
ARHGEF1-202ENST00000347545 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 SFPQP23246 707 aaKnown RBP eCLIP16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 KRI1Q8N9T8 703 aaKnown RBP16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 DUOX1Q9NRD9 1551 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 KCNJ6P48051 423 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 TDO2P48775 406 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 NR5A1Q13285 461 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 OXER1Q8TDS5 423 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 MPHOSPH8Q99549 860 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 NTSR2O95665 410 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 TPM4P67936 248 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 RTN1Q16799 776 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 CCDC82Q8N4S0 544 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 CRACR2BQ8N4Y2 399 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 LRRN4CLQ8ND94 238 aa16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 UTP14AQ9BVJ6 771 aaKnown RBP16.73■□□□□ 0.27
ARHGEF1-202ENST00000347545 ROBO1Q9Y6N7 1651 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 EXOC5O00471 708 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 WTAPQ15007 396 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 CNNM3Q8NE01 707 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 TMX1Q9H3N1 280 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 PCDHB6Q9Y5E3 794 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 RTL9Q8NET4 1388 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 CRKLP46109 303 aaKnown RBP16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 KIF18AQ8NI77 898 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 CCDC87Q9NVE4 849 aa16.72■□□□□ 0.27
ARHGEF1-202ENST00000347545 COL5A3P25940 1745 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 FANCGO15287 622 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 PTPREP23469 700 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 UBASH3AP57075 661 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 VSTM4Q8IW00 320 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 MED15Q96RN5 788 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 IQSEC3Q9UPP2 1182 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 NRAPQ86VF7 1730 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 CHRNDQ07001 517 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 GRAMD1CQ8IYS0 662 aa16.71■□□□□ 0.27
ARHGEF1-202ENST00000347545 GNAT2P19087 354 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 FMR1Q06787 632 aaKnown RBP eCLIP16.71■□□□□ 0.262e-6■■■□□ 15.1
ARHGEF1-202ENST00000347545 ITPK1Q13572 414 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 SEC23AQ15436 765 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 CCDC93Q567U6 631 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 USP49Q70CQ1 688 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 TMEM139Q8IV31 216 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 SDR42E1Q8WUS8 393 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 L2HGDHQ9H9P8 463 aa16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 CGNQ9P2M7 1197 aaKnown RBP16.71■□□□□ 0.26
ARHGEF1-202ENST00000347545 FAM205CA6NFA0 338 aa16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 PPARAQ07869 468 aa16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 KMT5BQ4FZB7 885 aa16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 SYT10Q6XYQ8 523 aa16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 ELOA2Q8IYF1 753 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 WASF1Q92558 559 aa16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 TOMM22Q9NS69 142 aa16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 SERTAD1Q9UHV2 236 aa16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 MYH13Q9UKX3 1938 aa16.7■□□□□ 0.26
ARHGEF1-202ENST00000347545 SARSP49591 514 aaKnown RBP16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 ELF2Q15723 593 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 NT5DC1Q5TFE4 455 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 ERO1AQ96HE7 468 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 NACAP1Q9BZK3 213 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 POLR2DO15514 142 aaKnown RBP16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 ACTN4O43707 911 aaKnown RBP16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 SERPINC1P01008 464 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 CCDC152Q4G0S7 254 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 HSP90AA4PQ58FG1 418 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 EARS2Q5JPH6 523 aaKnown RBP16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 C3orf67Q6ZVT6 689 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 FEZ1Q99689 392 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 ZNF804BA4D1E1 1349 aa16.69■□□□□ 0.26
ARHGEF1-202ENST00000347545 DEXIO95424 95 aa16.68■□□□□ 0.26
ARHGEF1-202ENST00000347545 POSTNQ15063 836 aa16.68■□□□□ 0.26
ARHGEF1-202ENST00000347545 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms