RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ST5P78524 1137 aa15.26■□□□□ 0.03
CASC4-202ENST00000345795 SKIDA1Q1XH10 827 aa15.26■□□□□ 0.03
CASC4-202ENST00000345795 ZNF274Q96GC6 653 aaPredicted RBP15.26■□□□□ 0.03
CASC4-202ENST00000345795 CNNM2Q9H8M5 875 aa15.26■□□□□ 0.03
CASC4-202ENST00000345795 USP42Q9H9J4 1324 aaKnown RBP15.26■□□□□ 0.03
CASC4-202ENST00000345795 COL5A2P05997 1499 aaPredicted RBP15.26■□□□□ 0.03
CASC4-202ENST00000345795 GRIN1Q05586 938 aa15.26■□□□□ 0.03
CASC4-202ENST00000345795 SERTAD1Q9UHV2 236 aa15.26■□□□□ 0.03
CASC4-202ENST00000345795 RGPD2P0DJD1 1756 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 TRIM75PA6NK02 468 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 BAG3O95817 575 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 UBE3CQ15386 1083 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 USP49Q70CQ1 688 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 WASF1Q92558 559 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 AP5Z1O43299 807 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 MB21D2Q8IYB1 491 aaPredicted RBP15.25■□□□□ 0.03
CASC4-202ENST00000345795 CCDC112Q8NEF3 446 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 SMARCE1Q969G3 411 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 CDK5RAP3Q96JB5 506 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 FAM84BQ96KN1 310 aaPredicted RBP15.25■□□□□ 0.03
CASC4-202ENST00000345795 SPATA31A1Q5TZJ5 1347 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 CSF1RP07333 972 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 TOP1P11387 765 aaKnown RBP15.25■□□□□ 0.03
CASC4-202ENST00000345795 KIF23Q02241 960 aaPredicted RBP15.25■□□□□ 0.03
CASC4-202ENST00000345795 GPR108Q9NPR9 543 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 NFAT5O94916 1531 aa15.25■□□□□ 0.03
CASC4-202ENST00000345795 SH2B2O14492 632 aaPredicted RBP15.24■□□□□ 0.03
CASC4-202ENST00000345795 NAPAP54920 295 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
CASC4-202ENST00000345795 EPSTI1Q96J88 318 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 POLD4Q9HCU8 107 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 TNNI2P48788 182 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 SNAP25P60880 206 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 ZNF34Q8IZ26 560 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 PPP1R9BQ96SB3 815 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
CASC4-202ENST00000345795 TANGO6Q9C0B7 1094 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 NYXQ9GZU5 481 aa15.24■□□□□ 0.03
CASC4-202ENST00000345795 SEC63Q9UGP8 760 aaKnown RBP15.24■□□□□ 0.03
CASC4-202ENST00000345795 NWD1Q149M9 1564 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 EXOSC10Q01780 885 aaKnown RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 KARSQ15046 597 aaKnown RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 LINC00301Q8NCQ3 95 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 FNBP4Q8N3X1 1017 aaPredicted RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 TMEM87BQ96K49 555 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 LLPHQ9BRT6 129 aaKnown RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 VEZTQ9HBM0 779 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 URI1O94763 535 aaPredicted RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 SLC16A2P36021 539 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 UBA7P41226 1012 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 NAP1L1P55209 391 aaKnown RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 NAA30Q147X3 362 aaPredicted RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 CCDC178Q5BJE1 867 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 SH3RF3Q8TEJ3 882 aaPredicted RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 ZSCAN10Q96SZ4 725 aaPredicted RBP15.23■□□□□ 0.03
CASC4-202ENST00000345795 NALCNQ8IZF0 1738 aa15.23■□□□□ 0.03
CASC4-202ENST00000345795 ERVV-1B6SEH8 477 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 WDHD1O75717 1129 aaPredicted RBP15.22■□□□□ 0.03
CASC4-202ENST00000345795 SERPINB2P05120 415 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 TXLNAP40222 546 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 ZNF75DP51815 510 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 PKD2L1Q9P0L9 805 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 GGA1Q9UJY5 639 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 PCDHA5Q9Y5H7 936 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 NTSR2O95665 410 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 KRT18P05783 430 aaKnown RBP15.22■□□□□ 0.03
CASC4-202ENST00000345795 TPM3P06753 285 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
CASC4-202ENST00000345795 RRAGBQ5VZM2 374 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 ZNF804AQ7Z570 1209 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 AFF2P51816 1311 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 AMIGO3Q86WK7 504 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 NOSTRINQ8IVI9 506 aa15.22■□□□□ 0.03
CASC4-202ENST00000345795 LTN1O94822 1766 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 HSPA1LP34931 641 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 INF2Q27J81 1249 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 TTF2Q9UNY4 1162 aaKnown RBP15.21■□□□□ 0.03
CASC4-202ENST00000345795 ZMYM6O95789 1325 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 BTDP43251 543 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 ADKP55263 362 aaKnown RBP15.21■□□□□ 0.03
CASC4-202ENST00000345795 MNS1Q8NEH6 495 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 CACTINQ8WUQ7 758 aaKnown RBP15.21■□□□□ 0.03
CASC4-202ENST00000345795 LY9Q9HBG7 655 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 FANCLQ9NW38 375 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 KIAA1468Q9P260 1216 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 HPS5Q9UPZ3 1129 aa15.21■□□□□ 0.03
CASC4-202ENST00000345795 AKAP12Q02952 1782 aa15.21■□□□□ 0.02
CASC4-202ENST00000345795 KRT2P35908 639 aa15.21■□□□□ 0.02
CASC4-202ENST00000345795 PNMA1Q8ND90 353 aa15.21■□□□□ 0.02
CASC4-202ENST00000345795 HINFPQ9BQA5 517 aa15.21■□□□□ 0.02
CASC4-202ENST00000345795 VPS16Q9H269 839 aa15.21■□□□□ 0.02
CASC4-202ENST00000345795 OFD1O75665 1012 aa15.2■□□□□ 0.02
CASC4-202ENST00000345795 BIN2Q9UBW5 565 aaPredicted RBP15.2■□□□□ 0.02
CASC4-202ENST00000345795 GNAT2P19087 354 aa15.2■□□□□ 0.02
CASC4-202ENST00000345795 TRIM28Q13263 835 aaKnown RBP15.2■□□□□ 0.02
CASC4-202ENST00000345795 CCDC144BQ3MJ40 725 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms