RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 NUP98P52948 1817 aa20.46■□□□□ 0.87
IFFO1-201ENST00000336604 PSDA5PKW4 1024 aaPredicted RBP20.46■□□□□ 0.87
IFFO1-201ENST00000336604 TMEM232C9JQI7 657 aa20.46■□□□□ 0.87
IFFO1-201ENST00000336604 KIF2AO00139 706 aaPredicted RBP20.46■□□□□ 0.87
IFFO1-201ENST00000336604 GABPB1Q06547 395 aaPredicted RBP20.46■□□□□ 0.87
IFFO1-201ENST00000336604 NR5A1Q13285 461 aa20.46■□□□□ 0.87
IFFO1-201ENST00000336604 RTN1Q16799 776 aa20.46■□□□□ 0.87
IFFO1-201ENST00000336604 OLFM4Q6UX06 510 aa20.46■□□□□ 0.87
IFFO1-201ENST00000336604 ANKRD36CQ5JPF3 1778 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 NPHP1O15259 732 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 SLU7O95391 586 aaKnown RBP20.45■□□□□ 0.86
IFFO1-201ENST00000336604 WTAPQ15007 396 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 KMT5BQ4FZB7 885 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 ERO1AQ96HE7 468 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 IQSEC3Q9UPP2 1182 aaPredicted RBP20.45■□□□□ 0.86
IFFO1-201ENST00000336604 NRDCO43847 1150 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 SAFBQ15424 915 aaKnown RBP eCLIP20.45■□□□□ 0.86
IFFO1-201ENST00000336604 TRIM22Q8IYM9 498 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 NUP133Q8WUM0 1156 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 STAG1Q8WVM7 1258 aa20.45■□□□□ 0.86
IFFO1-201ENST00000336604 A0A0G2JS52 829 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 ATP2B1P20020 1258 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 MDM2Q00987 491 aaPredicted RBP20.44■□□□□ 0.86
IFFO1-201ENST00000336604 SART3Q15020 963 aaKnown RBP20.44■□□□□ 0.86
IFFO1-201ENST00000336604 TAF3Q5VWG9 929 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 WASF1Q92558 559 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 NACAP1Q9BZK3 213 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 TMEM51Q9NW97 253 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 PCDHB6Q9Y5E3 794 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 LRP5O75197 1615 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 ERICH4A6NGS2 130 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 SMIM22K7EJ46 135 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 KCNJ6P48051 423 aa20.44■□□□□ 0.86
IFFO1-201ENST00000336604 POLR2DO15514 142 aaKnown RBP20.43■□□□□ 0.86
IFFO1-201ENST00000336604 HOMER1Q86YM7 354 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 LRRN4CLQ8ND94 238 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 OXER1Q8TDS5 423 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 INTS13Q9NVM9 706 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 LRP2BPQ9P2M1 347 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 FBXO2Q9UK22 296 aaPredicted RBP20.43■□□□□ 0.86
IFFO1-201ENST00000336604 MORC2Q9Y6X9 1032 aaPredicted RBP20.43■□□□□ 0.86
IFFO1-201ENST00000336604 ZNF827Q17R98 1081 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 FBXO38Q6PIJ6 1188 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 GRAMD1CQ8IYS0 662 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 CRACR2BQ8N4Y2 399 aaPredicted RBP20.43■□□□□ 0.86
IFFO1-201ENST00000336604 PDILTQ8N807 584 aa20.43■□□□□ 0.86
IFFO1-201ENST00000336604 VGLL3A8MV65 326 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 EXOC5O00471 708 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 CBFA2T2O43439 604 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 PRR29P0C7W0 189 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 ADGRA1Q86SQ6 560 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 VSTM4Q8IW00 320 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 SDR42E1Q8WUS8 393 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 L2HGDHQ9H9P8 463 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 ERICH2A1L162 156 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 DISP2A7MBM2 1401 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 PTPREP23469 700 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
IFFO1-201ENST00000336604 POSTNQ15063 836 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 TERF2Q15554 542 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 PNPLA7Q6ZV29 1317 aa20.42■□□□□ 0.86
IFFO1-201ENST00000336604 UTP14AQ9BVJ6 771 aaKnown RBP20.42■□□□□ 0.86
IFFO1-201ENST00000336604 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
IFFO1-201ENST00000336604 GNAT2P19087 354 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 DHX8Q14562 1220 aaKnown RBP20.41■□□□□ 0.86
IFFO1-201ENST00000336604 RILPL1Q5EBL4 403 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 KRT222Q8N1A0 295 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 FANCBQ8NB91 859 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 ZNF397Q8NF99 534 aaPredicted RBP20.41■□□□□ 0.86
IFFO1-201ENST00000336604 FOXP1Q9H334 677 aaPredicted RBP20.41■□□□□ 0.86
IFFO1-201ENST00000336604 ST7Q9NRC1 585 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 SERTAD1Q9UHV2 236 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 MAN1B1Q9UKM7 699 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 NID2Q14112 1375 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 FMR1Q06787 632 aaKnown RBP eCLIP20.41■□□□□ 0.86
IFFO1-201ENST00000336604 USP49Q70CQ1 688 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 ZNF654Q8IZM8 581 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 AK7Q96M32 723 aa20.41■□□□□ 0.86
IFFO1-201ENST00000336604 MINDY4BA8MYZ0 360 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 DEXIO95424 95 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 TMX1Q9H3N1 280 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 PPARAQ07869 468 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 ERCC6LQ2NKX8 1250 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 INTS5Q6P9B9 1019 aaKnown RBP20.4■□□□□ 0.86
IFFO1-201ENST00000336604 TRMT44Q8IYL2 757 aaKnown RBP20.4■□□□□ 0.86
IFFO1-201ENST00000336604 CABP5Q9NP86 173 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 ABCF2Q9UG63 623 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 DNAI1Q9UI46 699 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 ETF1P62495 437 aaKnown RBP20.4■□□□□ 0.86
IFFO1-201ENST00000336604 CCDC93Q567U6 631 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 UBAC1Q9BSL1 405 aa20.4■□□□□ 0.86
IFFO1-201ENST00000336604 ARAP2Q8WZ64 1704 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 WTIPA6NIX2 430 aaPredicted RBP20.39■□□□□ 0.85
IFFO1-201ENST00000336604 FANCGO15287 622 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 IGHMBP2P38935 993 aaKnown RBP20.39■□□□□ 0.85
IFFO1-201ENST00000336604 CHRNDQ07001 517 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 CCDC152Q4G0S7 254 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 SHISA4Q96DD7 197 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 HOOK1Q9UJC3 728 aaKnown RBP20.39■□□□□ 0.85
IFFO1-201ENST00000336604 NFE2L3Q9Y4A8 694 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms