RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
VARS2-201ENST00000321897 LPIN2Q92539 896 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 CNNM2Q9H8M5 875 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 SPTLC3Q9NUV7 552 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 SERTAD1Q9UHV2 236 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 DENND2AQ9ULE3 1009 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 SMYD4Q8IYR2 804 aaPredicted RBP17.3■□□□□ 0.36
VARS2-201ENST00000321897 BAG1Q99933 345 aaPredicted RBP17.3■□□□□ 0.36
VARS2-201ENST00000321897 ARID5AQ03989 594 aa17.29■□□□□ 0.36
VARS2-201ENST00000321897 TDRD12Q587J7 1177 aaKnown RBP17.29■□□□□ 0.36
VARS2-201ENST00000321897 ZBTB38Q8NAP3 1195 aaPredicted RBP17.29■□□□□ 0.36
VARS2-201ENST00000321897 CEP89Q96ST8 783 aa17.29■□□□□ 0.36
VARS2-201ENST00000321897 MAP2P11137 1827 aaKnown RBP17.29■□□□□ 0.36
VARS2-201ENST00000321897 ATP1A3P13637 1013 aa17.29■□□□□ 0.36
VARS2-201ENST00000321897 STAT6P42226 847 aa17.29■□□□□ 0.36
VARS2-201ENST00000321897 ETF1P62495 437 aaKnown RBP17.29■□□□□ 0.36
VARS2-201ENST00000321897 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
VARS2-201ENST00000321897 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.36
VARS2-201ENST00000321897 JADE2Q9NQC1 790 aa17.29■□□□□ 0.36
VARS2-201ENST00000321897 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
VARS2-201ENST00000321897 CEP170BQ9Y4F5 1589 aaPredicted RBP17.28■□□□□ 0.36
VARS2-201ENST00000321897 OVOS2A0A0J9YW53 1432 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 OVOS2Q6IE36 1432 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 PDE8BO95263 885 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 E2F4Q16254 413 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
VARS2-201ENST00000321897 CTDP1Q9Y5B0 961 aaPredicted RBP17.28■□□□□ 0.36
VARS2-201ENST00000321897 ADAMTS13Q76LX8 1427 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 CASP1P29466 404 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 MCAMP43121 646 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 RESTQ13127 1097 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 GUCA1BQ9UMX6 200 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 ZEB2O60315 1214 aa17.28■□□□□ 0.36
VARS2-201ENST00000321897 DYNLL1P63167 89 aaKnown RBP17.28■□□□□ 0.36
VARS2-201ENST00000321897 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
VARS2-201ENST00000321897 MYO1BO43795 1136 aa17.27■□□□□ 0.36
VARS2-201ENST00000321897 ZC3H13Q5T200 1668 aaKnown RBP17.27■□□□□ 0.36
VARS2-201ENST00000321897 TRIM21P19474 475 aaKnown RBP17.27■□□□□ 0.36
VARS2-201ENST00000321897 AKNAD1Q5T1N1 836 aa17.27■□□□□ 0.36
VARS2-201ENST00000321897 MMRN2Q9H8L6 949 aa17.27■□□□□ 0.36
VARS2-201ENST00000321897 BCCIPQ9P287 314 aaKnown RBP eCLIP17.27■□□□□ 0.36
VARS2-201ENST00000321897 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.35
VARS2-201ENST00000321897 CCDC175P0C221 793 aa17.27■□□□□ 0.35
VARS2-201ENST00000321897 GOLGA8HP0CJ92 632 aa17.27■□□□□ 0.35
VARS2-201ENST00000321897 PNMA6AP0CW24 399 aaPredicted RBP17.27■□□□□ 0.35
VARS2-201ENST00000321897 LETM2Q2VYF4 491 aa17.27■□□□□ 0.35
VARS2-201ENST00000321897 ADALQ6DHV7 355 aa17.27■□□□□ 0.35
VARS2-201ENST00000321897 PCDHA5Q9Y5H7 936 aa17.27■□□□□ 0.35
VARS2-201ENST00000321897 ELP1O95163 1332 aa17.27■□□□□ 0.35
VARS2-201ENST00000321897 CHMP4BP1P59074 171 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 RPAP1Q9BWH6 1393 aaPredicted RBP17.26■□□□□ 0.35
VARS2-201ENST00000321897 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 NAPAP54920 295 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 ZFYVE27Q5T4F4 411 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 TDRD7Q8NHU6 1098 aaKnown RBP17.26■□□□□ 0.35
VARS2-201ENST00000321897 ZNF335Q9H4Z2 1342 aaPredicted RBP17.26■□□□□ 0.35
VARS2-201ENST00000321897 GOLGA6L9A6NEM1 432 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 RAD51AP2Q09MP3 1159 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 MAP9Q49MG5 647 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 GIGYF2Q6Y7W6 1299 aaKnown RBP17.26■□□□□ 0.35
VARS2-201ENST00000321897 ZNF274Q96GC6 653 aaPredicted RBP17.26■□□□□ 0.35
VARS2-201ENST00000321897 GOLPH3LQ9H4A5 285 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 TCP11L1Q9NUJ3 509 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 ZNF76P36508 570 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 ASIC1P78348 528 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 CACNA2D4Q7Z3S7 1137 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 ZNF654Q8IZM8 581 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 RASGRP4Q8TDF6 673 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 PPP1R13BQ96KQ4 1090 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 ZSWIM5Q9P217 1185 aa17.26■□□□□ 0.35
VARS2-201ENST00000321897 TCERG1LQ5VWI1 586 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 FRMPD1Q5SYB0 1578 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 KIF5BP33176 963 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 KRT2P35908 639 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 TAX1BP1Q86VP1 789 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 NLRP10Q86W26 655 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 CEP57Q86XR8 500 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 GOLGA6L10A6NI86 522 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 PCCAP05165 728 aaPredicted RBP17.25■□□□□ 0.35
VARS2-201ENST00000321897 SF3A3Q12874 501 aaKnown RBP eCLIP17.25■□□□□ 0.351e-6■□□□□ 9.9
VARS2-201ENST00000321897 LCORLQ8N3X6 602 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.357e-6■■■■■ 33.4
VARS2-201ENST00000321897 GPR101Q96P66 508 aaPredicted RBP17.25■□□□□ 0.35
VARS2-201ENST00000321897 PSMB7Q99436 277 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 PDE11AQ9HCR9 933 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 CCDC87Q9NVE4 849 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 CTNND2Q9UQB3 1225 aa17.25■□□□□ 0.35
VARS2-201ENST00000321897 CLTCQ00610 1675 aaKnown RBP17.24■□□□□ 0.35
VARS2-201ENST00000321897 H7C1W4 665 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 TNNI2P48788 182 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 CT47A1Q5JQC4 288 aaPredicted RBP17.24■□□□□ 0.35
VARS2-201ENST00000321897 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 TNKSO95271 1327 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 CTAGE9A4FU28 777 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 PDIA6Q15084 440 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms