RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 NDUFB9Q9Y6M9 179 aa25.91■■□□□ 1.74
UBE2D3-201ENST00000321805 SIPA1L1O43166 1804 aa25.91■■□□□ 1.74
UBE2D3-201ENST00000321805 A0A0G2JLL6 359 aaPredicted RBP25.9■■□□□ 1.74
UBE2D3-201ENST00000321805 PRRT2Q7Z6L0 340 aaPredicted RBP25.9■■□□□ 1.74
UBE2D3-201ENST00000321805 METTL16Q86W50 562 aaKnown RBP25.9■■□□□ 1.74
UBE2D3-201ENST00000321805 CD99L2Q8TCZ2 262 aa25.9■■□□□ 1.74
UBE2D3-201ENST00000321805 ATAD5Q96QE3 1844 aa25.89■■□□□ 1.74
UBE2D3-201ENST00000321805 PDHXO00330 501 aa25.89■■□□□ 1.74
UBE2D3-201ENST00000321805 FOXP4Q8IVH2 680 aaPredicted RBP25.89■■□□□ 1.74
UBE2D3-201ENST00000321805 MAPKAPK5Q8IW41 473 aa25.89■■□□□ 1.74
UBE2D3-201ENST00000321805 EFCC1Q9HA90 598 aa25.89■■□□□ 1.74
UBE2D3-201ENST00000321805 SLURP2P0DP57 97 aa25.88■■□□□ 1.73
UBE2D3-201ENST00000321805 CAP2P40123 477 aa25.88■■□□□ 1.73
UBE2D3-201ENST00000321805 PARK7Q99497 189 aaKnown RBP25.88■■□□□ 1.73
UBE2D3-201ENST00000321805 SLC45A1Q9Y2W3 748 aa25.88■■□□□ 1.73
UBE2D3-201ENST00000321805 FAM196BA6NMK8 535 aa25.87■■□□□ 1.73
UBE2D3-201ENST00000321805 HLA-DOAP06340 250 aa25.87■■□□□ 1.73
UBE2D3-201ENST00000321805 ATP5JP18859 108 aa25.87■■□□□ 1.73
UBE2D3-201ENST00000321805 RRP1P56182 461 aaKnown RBP25.87■■□□□ 1.73
UBE2D3-201ENST00000321805 DYNLL1P63167 89 aaKnown RBP25.87■■□□□ 1.73
UBE2D3-201ENST00000321805 MIGA1Q8NAN2 632 aa25.87■■□□□ 1.73
UBE2D3-201ENST00000321805 GINM1Q9NU53 330 aa25.87■■□□□ 1.73
UBE2D3-201ENST00000321805 DNAJC2Q99543 621 aaKnown RBP25.86■■□□□ 1.73
UBE2D3-201ENST00000321805 PTPN22Q9Y2R2 807 aa25.86■■□□□ 1.73
UBE2D3-201ENST00000321805 HTTP42858 3142 aa25.86■■□□□ 1.73
UBE2D3-201ENST00000321805 MYH1P12882 1939 aa25.86■■□□□ 1.73
UBE2D3-201ENST00000321805 ADGRA2Q96PE1 1338 aa25.86■■□□□ 1.73
UBE2D3-201ENST00000321805 GOLIM4O00461 696 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 GNRH1P01148 92 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 USP5P45974 858 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 KIF22Q14807 665 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 SLC9C2Q5TAH2 1124 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 GPAT2Q6NUI2 795 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 C17orf99Q6UX52 265 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 TRIM34Q9BYJ4 488 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 DCTPP1Q9H773 170 aa25.85■■□□□ 1.73
UBE2D3-201ENST00000321805 PDE6AP16499 860 aa25.84■■□□□ 1.73
UBE2D3-201ENST00000321805 CRACR2BQ8N4Y2 399 aaPredicted RBP25.84■■□□□ 1.73
UBE2D3-201ENST00000321805 HAUS7Q99871 368 aa25.84■■□□□ 1.73
UBE2D3-201ENST00000321805 RIOK1Q9BRS2 568 aaKnown RBP25.84■■□□□ 1.73
UBE2D3-201ENST00000321805 PAG1Q9NWQ8 432 aa25.84■■□□□ 1.73
UBE2D3-201ENST00000321805 PALD1Q9ULE6 856 aa25.84■■□□□ 1.73
UBE2D3-201ENST00000321805 ASNSP08243 561 aa25.83■■□□□ 1.73
UBE2D3-201ENST00000321805 LACTBP83111 547 aaPredicted RBP25.83■■□□□ 1.73
UBE2D3-201ENST00000321805 ZNF280CQ8ND82 737 aa25.83■■□□□ 1.73
UBE2D3-201ENST00000321805 EHD4Q9H223 541 aa25.83■■□□□ 1.73
UBE2D3-201ENST00000321805 DNAJC18Q9H819 358 aa25.83■■□□□ 1.73
UBE2D3-201ENST00000321805 AS3MTQ9HBK9 375 aa25.83■■□□□ 1.73
UBE2D3-201ENST00000321805 MAGEB6P1A0A0J9YX57 407 aa25.82■■□□□ 1.72
UBE2D3-201ENST00000321805 TRIM75PA6NK02 468 aa25.82■■□□□ 1.72
UBE2D3-201ENST00000321805 USP17L5A8MUK1 530 aa25.82■■□□□ 1.72
UBE2D3-201ENST00000321805 MLLT1Q03111 559 aaPredicted RBP25.82■■□□□ 1.72
UBE2D3-201ENST00000321805 PROCA1Q8NCQ7 364 aaPredicted RBP25.82■■□□□ 1.72
UBE2D3-201ENST00000321805 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.82■■□□□ 1.729e-7■■□□□ 13.5
UBE2D3-201ENST00000321805 BOLA2Q9H3K6 86 aa25.82■■□□□ 1.72
UBE2D3-201ENST00000321805 DDX60LQ5H9U9 1706 aaKnown RBP25.82■■□□□ 1.72
UBE2D3-201ENST00000321805 LOC285556D6RIA3 1793 aa25.82■■□□□ 1.72
UBE2D3-201ENST00000321805 RRP1BQ14684 758 aaKnown RBP25.81■■□□□ 1.72
UBE2D3-201ENST00000321805 GADL1Q6ZQY3 521 aa25.81■■□□□ 1.72
UBE2D3-201ENST00000321805 TTC6Q86TZ1 520 aa25.81■■□□□ 1.72
UBE2D3-201ENST00000321805 AGTPBP1Q9UPW5 1226 aa25.81■■□□□ 1.72
UBE2D3-201ENST00000321805 ZNF532Q9HCE3 1301 aa25.81■■□□□ 1.72
UBE2D3-201ENST00000321805 TCRBV5S4A2TA0A5A2 114 aa25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 PRMT2P55345 433 aa25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 CAP1Q01518 475 aa25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 WDR18Q9BV38 432 aa25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 CRNKL1Q9BZJ0 848 aaKnown RBP25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 SAP30BPQ9UHR5 308 aaKnown RBP25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 NAV1Q8NEY1 1877 aa25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 MYH7P12883 1935 aa25.8■■□□□ 1.72
UBE2D3-201ENST00000321805 SOX10P56693 466 aa25.79■■□□□ 1.72
UBE2D3-201ENST00000321805 SPP2Q13103 211 aa25.79■■□□□ 1.72
UBE2D3-201ENST00000321805 GPATCH3Q96I76 525 aa25.79■■□□□ 1.72
UBE2D3-201ENST00000321805 BCL11AQ9H165 835 aa25.79■■□□□ 1.72
UBE2D3-201ENST00000321805 ECHDC1Q9NTX5 307 aa25.79■■□□□ 1.72
UBE2D3-201ENST00000321805 CPA4Q9UI42 421 aa25.79■■□□□ 1.72
UBE2D3-201ENST00000321805 SERPINB13Q9UIV8 391 aa25.79■■□□□ 1.72
UBE2D3-201ENST00000321805 PNMA3Q9UL41 463 aa25.79■■□□□ 1.72
UBE2D3-201ENST00000321805 BCRP11274 1271 aa25.78■■□□□ 1.72
UBE2D3-201ENST00000321805 ADD2P35612 726 aa25.78■■□□□ 1.72
UBE2D3-201ENST00000321805 SH3D19Q5HYK7 790 aa25.78■■□□□ 1.72
UBE2D3-201ENST00000321805 CCDC84Q86UT8 332 aaPredicted RBP25.78■■□□□ 1.72
UBE2D3-201ENST00000321805 ARMC5Q96C12 935 aa25.78■■□□□ 1.72
UBE2D3-201ENST00000321805 TAOK2Q9UL54 1235 aa25.78■■□□□ 1.72
UBE2D3-201ENST00000321805 SMARCA5O60264 1052 aaPredicted RBP25.77■■□□□ 1.72
UBE2D3-201ENST00000321805 PABPC4Q13310 644 aaKnown RBP eCLIP25.77■■□□□ 1.724e-7■■■■□ 24.1
UBE2D3-201ENST00000321805 EDC3Q96F86 508 aaKnown RBP25.77■■□□□ 1.72
UBE2D3-201ENST00000321805 CYP2C8P10632 490 aa25.76■■□□□ 1.71
UBE2D3-201ENST00000321805 UBE3CQ15386 1083 aa25.76■■□□□ 1.71
UBE2D3-201ENST00000321805 ZSCAN25Q6NSZ9 544 aa25.76■■□□□ 1.71
UBE2D3-201ENST00000321805 TATDN1Q6P1N9 297 aa25.76■■□□□ 1.71
UBE2D3-201ENST00000321805 YTHDC1Q96MU7 727 aaKnown RBP25.76■■□□□ 1.71
UBE2D3-201ENST00000321805 ZBTB21Q9ULJ3 1066 aa25.76■■□□□ 1.71
UBE2D3-201ENST00000321805 PCDHB15Q9Y5E8 787 aa25.76■■□□□ 1.71
UBE2D3-201ENST00000321805 SMCR8Q8TEV9 937 aaPredicted RBP25.75■■□□□ 1.71
UBE2D3-201ENST00000321805 ARHGAP39Q9C0H5 1083 aa25.75■■□□□ 1.71
UBE2D3-201ENST00000321805 ZSWIM8A7E2V4 1837 aa25.74■■□□□ 1.71
UBE2D3-201ENST00000321805 RBBP6Q7Z6E9 1792 aaKnown RBP25.74■■□□□ 1.71
UBE2D3-201ENST00000321805 HOXD10P28358 340 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms