RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 CASP7P55210 303 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 TOB2Q14106 344 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 WDR78Q5VTH9 848 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 TBC1D10CQ8IV04 446 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 DYNLL2Q96FJ2 89 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 PLIN2Q99541 437 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 RAB34Q9BZG1 259 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 C6orf50Q9HD87 102 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 ATP8A2Q9NTI2 1148 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 PRR5LQ6MZQ0 368 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 TANGO6Q9C0B7 1094 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 RBSNQ9H1K0 784 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 CLIP2Q9UDT6 1046 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 SF3B3Q15393 1217 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 VWA3AA6NCI4 1184 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 ZSCAN30Q86W11 494 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 ZNF609O15014 1411 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 ADAMTSL3P82987 1691 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 AKAP12Q02952 1782 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 PPFIBP1Q86W92 1011 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 NIM1KQ8IY84 436 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 TTC14Q96N46 770 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 AIFM3Q96NN9 605 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 BTBD18B2RXH4 712 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 CYP2D6P10635 497 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 DLGAP5Q15398 846 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 LETM2Q2VYF4 491 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 RILPL1Q5EBL4 403 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 STOX1Q6ZVD7 989 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 GJB4Q9NTQ9 266 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 ZMYM6O95789 1325 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 SALL3Q9BXA9 1300 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 NPR1P16066 1061 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 CERS3Q8IU89 383 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 FAM177A1Q8N128 213 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 SUPT20HQ8NEM7 779 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 GPT2Q8TD30 523 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 FTOQ9C0B1 505 aaKnown RBP eCLIP10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 CD209Q9NNX6 404 aa10.63□□□□□ -0.71
TMEM39A-201ENST00000319172 CNTNAP4Q9C0A0 1308 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 A0A0G2JLW4 131 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 BMP15O95972 392 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 LIG1P18858 919 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 LUZP1Q86V48 1076 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 LRRC47Q8N1G4 583 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 FBXO18Q8NFZ0 1043 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 ZNF830Q96NB3 372 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 CBFA2T2O43439 604 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 OFD1O75665 1012 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 GPSM2P81274 684 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 FAM160A1Q05DH4 1040 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 JAKMIP3Q5VZ66 844 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 AOPEPQ8N6M6 819 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 CALML4Q96GE6 196 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 UIMC1Q96RL1 719 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 C21orf2O43822 256 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 RAD17O75943 681 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 ARID4AP29374 1257 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 GNA11P29992 359 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 UBA5Q9GZZ9 404 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 PRM3Q9NNZ6 103 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 TNS2Q63HR2 1409 aa10.62□□□□□ -0.71
TMEM39A-201ENST00000319172 TCP10L2B9ZVM9 353 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 STAT6P42226 847 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 SLC1A4P43007 532 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 SH2B2O14492 632 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 NAP1L1P55209 391 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 ATL3Q6DD88 541 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 MASTLQ96GX5 879 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 BCCIPQ9P287 314 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 CLRN2A0PK11 232 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 LMOD1P29536 600 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 CACNB3P54284 484 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 PPP4R3BQ5MIZ7 849 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 CHD2O14647 1828 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 SLIT3O75094 1523 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 NEDD4P46934 1319 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 FRMPD2Q68DX3 1309 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 GSG1L2A8MUP6 293 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 TMC4Q7Z404 712 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 SMARCC2Q8TAQ2 1214 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 SH3RF3Q8TEJ3 882 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 CPLX3Q8WVH0 158 aa10.61□□□□□ -0.71
TMEM39A-201ENST00000319172 GPKOWQ92917 476 aaPredicted RBP eCLIP10.61□□□□□ -0.711e-6■■■■■ 44.7
TMEM39A-201ENST00000319172 ZBTB7AO95365 584 aa10.6□□□□□ -0.71
TMEM39A-201ENST00000319172 KLRK1P26718 216 aa10.6□□□□□ -0.71
TMEM39A-201ENST00000319172 PRKG1Q13976 671 aa10.6□□□□□ -0.71
TMEM39A-201ENST00000319172 C3orf67Q6ZVT6 689 aa10.6□□□□□ -0.71
TMEM39A-201ENST00000319172 SFPQP23246 707 aaKnown RBP eCLIP10.6□□□□□ -0.71
TMEM39A-201ENST00000319172 CHRNA5P30532 468 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms