RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 BIN2Q9UBW5 565 aaPredicted RBP24.65■■□□□ 1.54
SERF1A-201ENST00000317633 PNMA3Q9UL41 463 aa24.65■■□□□ 1.54
SERF1A-201ENST00000317633 AGTPBP1Q9UPW5 1226 aa24.65■■□□□ 1.54
SERF1A-201ENST00000317633 MAST2Q6P0Q8 1798 aa24.65■■□□□ 1.54
SERF1A-201ENST00000317633 BRCA2P51587 3418 aa24.64■■□□□ 1.54
SERF1A-201ENST00000317633 DHX36Q9H2U1 1008 aaKnown RBP24.64■■□□□ 1.54
SERF1A-201ENST00000317633 HERC5Q9UII4 1024 aaKnown RBP24.64■■□□□ 1.54
SERF1A-201ENST00000317633 FAM196BA6NMK8 535 aa24.63■■□□□ 1.53
SERF1A-201ENST00000317633 PRKCZQ05513 592 aa24.63■■□□□ 1.53
SERF1A-201ENST00000317633 MTFR1Q15390 333 aa24.63■■□□□ 1.53
SERF1A-201ENST00000317633 PROCA1Q8NCQ7 364 aaPredicted RBP24.63■■□□□ 1.53
SERF1A-201ENST00000317633 SLAIN1Q8ND83 568 aa24.63■■□□□ 1.53
SERF1A-201ENST00000317633 SNRKQ9NRH2 765 aa24.63■■□□□ 1.53
SERF1A-201ENST00000317633 ZNF280CQ8ND82 737 aa24.62■■□□□ 1.53
SERF1A-201ENST00000317633 SH3RF3Q8TEJ3 882 aaPredicted RBP24.62■■□□□ 1.53
SERF1A-201ENST00000317633 ZNF512BQ96KM6 892 aaPredicted RBP24.62■■□□□ 1.53
SERF1A-201ENST00000317633 DBNDD2Q9BQY9 259 aa24.62■■□□□ 1.53
SERF1A-201ENST00000317633 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.62■■□□□ 1.53
SERF1A-201ENST00000317633 PI4KBQ9UBF8 816 aa24.62■■□□□ 1.53
SERF1A-201ENST00000317633 TNPO2O14787 897 aaKnown RBP24.61■■□□□ 1.53
SERF1A-201ENST00000317633 CAP2P40123 477 aa24.61■■□□□ 1.53
SERF1A-201ENST00000317633 SPP2Q13103 211 aa24.61■■□□□ 1.53
SERF1A-201ENST00000317633 PABPC4Q13310 644 aaKnown RBP eCLIP24.61■■□□□ 1.53
SERF1A-201ENST00000317633 CCDC84Q86UT8 332 aaPredicted RBP24.61■■□□□ 1.53
SERF1A-201ENST00000317633 ITPRIPQ8IWB1 547 aa24.61■■□□□ 1.53
SERF1A-201ENST00000317633 AS3MTQ9HBK9 375 aa24.61■■□□□ 1.53
SERF1A-201ENST00000317633 AATFQ9NY61 560 aaKnown RBP eCLIP24.61■■□□□ 1.53
SERF1A-201ENST00000317633 CDK5RAP2Q96SN8 1893 aa24.6■■□□□ 1.53
SERF1A-201ENST00000317633 MYO5AQ9Y4I1 1855 aaKnown RBP24.6■■□□□ 1.53
SERF1A-201ENST00000317633 USP17L5A8MUK1 530 aa24.6■■□□□ 1.53
SERF1A-201ENST00000317633 GJB1P08034 283 aa24.6■■□□□ 1.53
SERF1A-201ENST00000317633 CCL5P13501 91 aa24.6■■□□□ 1.53
SERF1A-201ENST00000317633 PPP4CP60510 307 aa24.6■■□□□ 1.53
SERF1A-201ENST00000317633 HABP4Q5JVS0 413 aaKnown RBP24.6■■□□□ 1.53
SERF1A-201ENST00000317633 RNF208Q9H0X6 261 aa24.6■■□□□ 1.53
SERF1A-201ENST00000317633 C1orf115Q9H7X2 142 aa24.6■■□□□ 1.53
SERF1A-201ENST00000317633 NOP58Q9Y2X3 529 aaKnown RBP24.6■■□□□ 1.53
SERF1A-201ENST00000317633 LOC285556D6RIA3 1793 aa24.59■■□□□ 1.53
SERF1A-201ENST00000317633 FOCADQ5VW36 1801 aa24.59■■□□□ 1.53
SERF1A-201ENST00000317633 CYP2E1P05181 493 aaPredicted RBP24.59■■□□□ 1.53
SERF1A-201ENST00000317633 GABRQQ9UN88 632 aa24.59■■□□□ 1.53
SERF1A-201ENST00000317633 ZBTB7BO15156 539 aaPredicted RBP24.58■■□□□ 1.53
SERF1A-201ENST00000317633 ADCY3O60266 1144 aa24.58■■□□□ 1.53
SERF1A-201ENST00000317633 GJA8P48165 433 aa24.58■■□□□ 1.53
SERF1A-201ENST00000317633 FLT3LGP49771 235 aa24.58■■□□□ 1.53
SERF1A-201ENST00000317633 TREML2Q5T2D2 321 aa24.58■■□□□ 1.53
SERF1A-201ENST00000317633 ANKRD13CQ8N6S4 541 aa24.58■■□□□ 1.53
SERF1A-201ENST00000317633 COA7Q96BR5 231 aa24.58■■□□□ 1.53
SERF1A-201ENST00000317633 TRIM34Q9BYJ4 488 aa24.58■■□□□ 1.53
SERF1A-201ENST00000317633 GCLCP48506 637 aaPredicted RBP24.57■■□□□ 1.52
SERF1A-201ENST00000317633 FAM110CQ1W6H9 321 aa24.57■■□□□ 1.52
SERF1A-201ENST00000317633 FOXP4Q8IVH2 680 aaPredicted RBP24.57■■□□□ 1.52
SERF1A-201ENST00000317633 PXYLP1Q8TE99 480 aa24.57■■□□□ 1.52
SERF1A-201ENST00000317633 TGFBRAP1Q8WUH2 860 aa24.57■■□□□ 1.52
SERF1A-201ENST00000317633 SHISA4Q96DD7 197 aa24.57■■□□□ 1.52
SERF1A-201ENST00000317633 DOCK3Q8IZD9 2030 aa24.57■■□□□ 1.52
SERF1A-201ENST00000317633 ASNSP08243 561 aa24.56■■□□□ 1.52
SERF1A-201ENST00000317633 ZAP70P43403 619 aa24.56■■□□□ 1.52
SERF1A-201ENST00000317633 HMGCS2P54868 508 aa24.56■■□□□ 1.52
SERF1A-201ENST00000317633 IRF5Q13568 498 aa24.56■■□□□ 1.52
SERF1A-201ENST00000317633 MAPKAPK5Q8IW41 473 aa24.56■■□□□ 1.52
SERF1A-201ENST00000317633 CRACR2BQ8N4Y2 399 aaPredicted RBP24.56■■□□□ 1.52
SERF1A-201ENST00000317633 SIPA1L1O43166 1804 aa24.56■■□□□ 1.52
SERF1A-201ENST00000317633 CAPN2P17655 700 aa24.55■■□□□ 1.52
SERF1A-201ENST00000317633 SH3D19Q5HYK7 790 aa24.55■■□□□ 1.52
SERF1A-201ENST00000317633 CERS3Q8IU89 383 aa24.55■■□□□ 1.52
SERF1A-201ENST00000317633 GINM1Q9NU53 330 aa24.55■■□□□ 1.52
SERF1A-201ENST00000317633 DBNLQ9UJU6 430 aaKnown RBP24.55■■□□□ 1.52
SERF1A-201ENST00000317633 FLT1P17948 1338 aa24.55■■□□□ 1.52
SERF1A-201ENST00000317633 RRP1BQ14684 758 aaKnown RBP24.54■■□□□ 1.52
SERF1A-201ENST00000317633 ADGRA1Q86SQ6 560 aa24.54■■□□□ 1.52
SERF1A-201ENST00000317633 HTATIP2Q9BUP3 242 aa24.54■■□□□ 1.52
SERF1A-201ENST00000317633 WDR18Q9BV38 432 aa24.54■■□□□ 1.52
SERF1A-201ENST00000317633 CCDC8Q9H0W5 538 aaPredicted RBP24.54■■□□□ 1.52
SERF1A-201ENST00000317633 HLA-DOAP06340 250 aa24.53■■□□□ 1.52
SERF1A-201ENST00000317633 RLBP1P12271 317 aa24.53■■□□□ 1.52
SERF1A-201ENST00000317633 METTL16Q86W50 562 aaKnown RBP24.53■■□□□ 1.52
SERF1A-201ENST00000317633 ERC1Q8IUD2 1116 aa24.53■■□□□ 1.52
SERF1A-201ENST00000317633 MIER1Q8N108 512 aa24.53■■□□□ 1.52
SERF1A-201ENST00000317633 U2AF1L4Q8WU68 220 aaKnown RBP24.53■■□□□ 1.52
SERF1A-201ENST00000317633 DPF3Q92784 378 aa24.53■■□□□ 1.52
SERF1A-201ENST00000317633 EAF2Q96CJ1 260 aaPredicted RBP24.53■■□□□ 1.52
SERF1A-201ENST00000317633 UNC93B1Q9H1C4 597 aa24.53■■□□□ 1.52
SERF1A-201ENST00000317633 ELNP15502 786 aa24.52■■□□□ 1.52
SERF1A-201ENST00000317633 ASCC2Q9H1I8 757 aaPredicted RBP24.52■■□□□ 1.52
SERF1A-201ENST00000317633 PIH1D3Q9NQM4 214 aaKnown RBP24.52■■□□□ 1.52
SERF1A-201ENST00000317633 TMOD4Q9NZQ9 345 aa24.52■■□□□ 1.52
SERF1A-201ENST00000317633 TAOK2Q9UL54 1235 aa24.52■■□□□ 1.52
SERF1A-201ENST00000317633 PALD1Q9ULE6 856 aa24.52■■□□□ 1.52
SERF1A-201ENST00000317633 MYH1P12882 1939 aa24.52■■□□□ 1.52
SERF1A-201ENST00000317633 C19orf81C9J6K1 198 aa24.51■■□□□ 1.51
SERF1A-201ENST00000317633 IDH1O75874 414 aaKnown RBP24.51■■□□□ 1.51
SERF1A-201ENST00000317633 SGPL1O95470 568 aa24.51■■□□□ 1.51
SERF1A-201ENST00000317633 INHAP05111 366 aa24.51■■□□□ 1.51
SERF1A-201ENST00000317633 CYP7A1P22680 504 aa24.51■■□□□ 1.51
SERF1A-201ENST00000317633 BACE1P56817 501 aa24.51■■□□□ 1.51
SERF1A-201ENST00000317633 TMED8Q6PL24 325 aaPredicted RBP24.51■■□□□ 1.51
SERF1A-201ENST00000317633 TLR7Q9NYK1 1049 aaKnown RBP24.51■■□□□ 1.51
SERF1A-201ENST00000317633 H0YGN5 161 aa24.5■■□□□ 1.51
SERF1A-201ENST00000317633 IRX3P78415 501 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms