RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 FAM205AQ6ZU69 1335 aa16.51■□□□□ 0.23
VRK3-201ENST00000316763 TRDNQ13061 729 aa16.51■□□□□ 0.23
VRK3-201ENST00000316763 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
VRK3-201ENST00000316763 LCORLQ8N3X6 602 aa16.51■□□□□ 0.23
VRK3-201ENST00000316763 LARGE2Q8N3Y3 721 aa16.51■□□□□ 0.23
VRK3-201ENST00000316763 DBNDD1Q9H9R9 158 aa16.51■□□□□ 0.23
VRK3-201ENST00000316763 MRVI1Q9Y6F6 885 aa16.51■□□□□ 0.23
VRK3-201ENST00000316763 UTRNP46939 3433 aa16.51■□□□□ 0.23
VRK3-201ENST00000316763 GOLGA6L6A8MZA4 724 aa16.5■□□□□ 0.23
VRK3-201ENST00000316763 CAVIN2O95810 425 aa16.5■□□□□ 0.23
VRK3-201ENST00000316763 FOSBP53539 338 aa16.5■□□□□ 0.23
VRK3-201ENST00000316763 CKAP2LQ8IYA6 745 aa16.5■□□□□ 0.23
VRK3-201ENST00000316763 MIGA1Q8NAN2 632 aa16.5■□□□□ 0.23
VRK3-201ENST00000316763 COL4A5P29400 1685 aa16.5■□□□□ 0.23
VRK3-201ENST00000316763 MAGEB6P1A0A0J9YX57 407 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 GSG1L2A8MUP6 293 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 G3V3G9 751 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 CTAGE5O15320 804 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 NR1I2O75469 434 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 LDHBP07195 334 aaKnown RBP16.49■□□□□ 0.23
VRK3-201ENST00000316763 ADD1P35611 737 aaKnown RBP16.49■□□□□ 0.23
VRK3-201ENST00000316763 DCAF8Q5TAQ9 597 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 DICER1Q9UPY3 1922 aaKnown RBP16.49■□□□□ 0.23
VRK3-201ENST00000316763 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
VRK3-201ENST00000316763 EPB41L4AQ9HCS5 686 aaPredicted RBP16.49■□□□□ 0.23
VRK3-201ENST00000316763 MAST2Q6P0Q8 1798 aa16.48■□□□□ 0.23
VRK3-201ENST00000316763 ECE2O60344 883 aa16.48■□□□□ 0.23
VRK3-201ENST00000316763 CEBPZQ03701 1054 aaKnown RBP16.48■□□□□ 0.23
VRK3-201ENST00000316763 GRIK5Q16478 980 aa16.48■□□□□ 0.23
VRK3-201ENST00000316763 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
VRK3-201ENST00000316763 DZIP1Q86YF9 867 aaKnown RBP16.48■□□□□ 0.23
VRK3-201ENST00000316763 SCN9AQ15858 1988 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 CPLX1O14810 134 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 PRKAB2O43741 272 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 APPP05067 770 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 LMNB1P20700 586 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 ANO6Q4KMQ2 910 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 CCAR1Q8IX12 1150 aaKnown RBP16.47■□□□□ 0.23
VRK3-201ENST00000316763 IFNL3Q8IZI9 196 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 KCNQ5Q9NR82 932 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 MFSD14BQ5SR56 506 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 RGS22Q8NE09 1264 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 C8orf76Q96K31 380 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 NBPF3Q9H094 633 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 SUGT1Q9Y2Z0 365 aa16.47■□□□□ 0.23
VRK3-201ENST00000316763 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
VRK3-201ENST00000316763 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
VRK3-201ENST00000316763 DYNLL1P63167 89 aaKnown RBP16.46■□□□□ 0.23
VRK3-201ENST00000316763 GSTO1P78417 241 aa16.46■□□□□ 0.23
VRK3-201ENST00000316763 NIM1KQ8IY84 436 aa16.46■□□□□ 0.23
VRK3-201ENST00000316763 JDP2Q8WYK2 163 aa16.46■□□□□ 0.23
VRK3-201ENST00000316763 USP28Q96RU2 1077 aa16.46■□□□□ 0.23
VRK3-201ENST00000316763 NACAP1Q9BZK3 213 aa16.46■□□□□ 0.23
VRK3-201ENST00000316763 ORC3Q9UBD5 711 aaPredicted RBP16.46■□□□□ 0.23
VRK3-201ENST00000316763 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
VRK3-201ENST00000316763 ANTXR2P58335 489 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 GTF2IP78347 998 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 GUCY1B3Q02153 619 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 NAPBQ9H115 298 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 CBX8Q9HC52 389 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 GPHNQ9NQX3 736 aaPredicted RBP16.45■□□□□ 0.22
VRK3-201ENST00000316763 ZNRF3Q9ULT6 936 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 ME1P48163 572 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 BRAPQ7Z569 592 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 RTEL1Q9NZ71 1219 aa16.45■□□□□ 0.22
VRK3-201ENST00000316763 KINO60870 393 aaKnown RBP16.44■□□□□ 0.22
VRK3-201ENST00000316763 PPP4CP60510 307 aa16.44■□□□□ 0.22
VRK3-201ENST00000316763 CPLX2Q6PUV4 134 aaKnown RBP16.44■□□□□ 0.22
VRK3-201ENST00000316763 LUZP1Q86V48 1076 aa16.44■□□□□ 0.22
VRK3-201ENST00000316763 FAM163AQ96GL9 167 aaPredicted RBP16.44■□□□□ 0.22
VRK3-201ENST00000316763 AATFQ9NY61 560 aaKnown RBP eCLIP16.44■□□□□ 0.22
VRK3-201ENST00000316763 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
VRK3-201ENST00000316763 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
VRK3-201ENST00000316763 PSME4Q14997 1843 aa16.44■□□□□ 0.22
VRK3-201ENST00000316763 AP5Z1O43299 807 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 CDKL5O76039 1030 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 LDHCP07864 332 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 ZNF165P49910 485 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 FAM160A1Q05DH4 1040 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 DIXDC1Q155Q3 683 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 TBC1D10CQ8IV04 446 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 FBXO18Q8NFZ0 1043 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 SDR42E1Q8WUS8 393 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 ZNF646O15015 1829 aaPredicted RBP16.43■□□□□ 0.22
VRK3-201ENST00000316763 C9orf131Q5VYM1 1079 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 CERS5Q8N5B7 392 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 FSIP1Q8NA03 581 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
VRK3-201ENST00000316763 ZNF830Q96NB3 372 aaPredicted RBP16.43■□□□□ 0.22
VRK3-201ENST00000316763 TTC12Q9H892 705 aaPredicted RBP16.43■□□□□ 0.22
VRK3-201ENST00000316763 MROH7-TTC4A0A0A0MT08 1334 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 USP17L3A6NCW0 530 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms