RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
VAMP2-201ENST00000316509 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
VAMP2-201ENST00000316509 DUOX1Q9NRD9 1551 aa16.15■□□□□ 0.18
VAMP2-201ENST00000316509 LDHBP07195 334 aaKnown RBP16.15■□□□□ 0.18
VAMP2-201ENST00000316509 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
VAMP2-201ENST00000316509 SNW1Q13573 536 aaKnown RBP16.15■□□□□ 0.18
VAMP2-201ENST00000316509 SLC39A14Q15043 492 aa16.15■□□□□ 0.18
VAMP2-201ENST00000316509 CAMK4Q16566 473 aa16.15■□□□□ 0.18
VAMP2-201ENST00000316509 ZNF772Q68DY9 489 aaPredicted RBP16.15■□□□□ 0.18
VAMP2-201ENST00000316509 OTUD7BQ6GQQ9 843 aa16.15■□□□□ 0.18
VAMP2-201ENST00000316509 CCDC24Q8N4L8 307 aa16.15■□□□□ 0.18
VAMP2-201ENST00000316509 SLC26A6Q9BXS9 759 aa16.15■□□□□ 0.18
VAMP2-201ENST00000316509 RNF26Q9BY78 433 aaPredicted RBP16.15■□□□□ 0.18
VAMP2-201ENST00000316509 DCP1AQ9NPI6 582 aaPredicted RBP16.15■□□□□ 0.18
VAMP2-201ENST00000316509 TNRC6CQ9HCJ0 1690 aaKnown RBP16.15■□□□□ 0.18
VAMP2-201ENST00000316509 UBR3Q6ZT12 1888 aa16.15■□□□□ 0.18
VAMP2-201ENST00000316509 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 USP17L21D6R901 530 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
VAMP2-201ENST00000316509 TNKSO95271 1327 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
VAMP2-201ENST00000316509 PDE4BQ07343 736 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 GNL2Q13823 731 aaKnown RBP16.14■□□□□ 0.17
VAMP2-201ENST00000316509 CATIPQ7Z7H3 387 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 FSIP1Q8NA03 581 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 DDAH1O94760 285 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 TPM3P06753 285 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 XBP1P17861 261 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 NBPF11Q86T75 865 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 PHKBQ93100 1093 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 NOL10Q9BSC4 688 aaKnown RBP16.14■□□□□ 0.17
VAMP2-201ENST00000316509 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.14■□□□□ 0.17
VAMP2-201ENST00000316509 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.17
VAMP2-201ENST00000316509 KIAA1551Q9HCM1 1747 aa16.14■□□□□ 0.17
VAMP2-201ENST00000316509 RXRAP19793 462 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 CMA1P23946 247 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 PRDX5P30044 214 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 IFIT1BQ5T764 474 aaKnown RBP16.13■□□□□ 0.17
VAMP2-201ENST00000316509 TXNRD3Q86VQ6 643 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.13■□□□□ 0.17
VAMP2-201ENST00000316509 AATFQ9NY61 560 aaKnown RBP eCLIP16.13■□□□□ 0.17
VAMP2-201ENST00000316509 GGA1Q9UJY5 639 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 CLIC4Q9Y696 253 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 KIF28PB7ZC32 967 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 IL1R1P14778 569 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 SLF2Q8IX21 1173 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 AMOTL1Q8IY63 956 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 FMR1NBQ8N0W7 255 aaPredicted RBP16.13■□□□□ 0.17
VAMP2-201ENST00000316509 FLAD1Q8NFF5 587 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 TIGD1Q96MW7 591 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 USP25Q9UHP3 1055 aa16.13■□□□□ 0.17
VAMP2-201ENST00000316509 MORC2Q9Y6X9 1032 aaPredicted RBP16.13■□□□□ 0.17
VAMP2-201ENST00000316509 MYH13Q9UKX3 1938 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 PLSCR1O15162 318 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 ADCY5O95622 1261 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 MMP1P03956 469 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
VAMP2-201ENST00000316509 CCDC144CPQ8IYA2 1237 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 CKAP2LQ8IYA6 745 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 ENAHQ8N8S7 591 aaPredicted RBP16.12■□□□□ 0.17
VAMP2-201ENST00000316509 ZKSCAN3Q9BRR0 538 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 FTOQ9C0B1 505 aaKnown RBP eCLIP16.12■□□□□ 0.17
VAMP2-201ENST00000316509 ZKSCAN5Q9Y2L8 839 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
VAMP2-201ENST00000316509 PRPF3O43395 683 aaKnown RBP16.11■□□□□ 0.17
VAMP2-201ENST00000316509 GPSM2P81274 684 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 NLGN1Q8N2Q7 840 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 TBC1D22AQ8WUA7 517 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 GOLPH3LQ9H4A5 285 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 FAM237AA0A1B0GTK4 181 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
VAMP2-201ENST00000316509 TRIM37O94972 964 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
VAMP2-201ENST00000316509 STX1AQ16623 288 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 MAP3K14Q99558 947 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 CD209Q9NNX6 404 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 ANO10Q9NW15 660 aa16.11■□□□□ 0.17
VAMP2-201ENST00000316509 ZNF500O60304 480 aaPredicted RBP16.1■□□□□ 0.17
VAMP2-201ENST00000316509 PTMAP06454 111 aaKnown RBP16.1■□□□□ 0.17
VAMP2-201ENST00000316509 PLCG2P16885 1265 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 ANO6Q4KMQ2 910 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 RILPL1Q5EBL4 403 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 NOSTRINQ8IVI9 506 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 FAM163AQ96GL9 167 aaPredicted RBP16.1■□□□□ 0.17
VAMP2-201ENST00000316509 MKRN1Q9UHC7 482 aaKnown RBP16.1■□□□□ 0.17
VAMP2-201ENST00000316509 AXDND1Q5T1B0 1012 aaPredicted RBP16.1■□□□□ 0.17
VAMP2-201ENST00000316509 C12orf60Q5U649 245 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 AIFM3Q96NN9 605 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 ZNF287Q9HBT7 754 aa16.1■□□□□ 0.17
VAMP2-201ENST00000316509 GOLGA6L6A8MZA4 724 aa16.09■□□□□ 0.17
VAMP2-201ENST00000316509 CUTAO60888 179 aa16.09■□□□□ 0.17
VAMP2-201ENST00000316509 UFL1O94874 794 aa16.09■□□□□ 0.17
VAMP2-201ENST00000316509 PTPAQ15257 358 aa16.09■□□□□ 0.17
VAMP2-201ENST00000316509 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms