RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 TREML2Q5T2D2 321 aa21.47■■□□□ 1.03
EXOSC4-201ENST00000316052 TEX11Q8IYF3 940 aa21.47■■□□□ 1.03
EXOSC4-201ENST00000316052 TRIOBPQ9H2D6 2365 aa21.47■■□□□ 1.03
EXOSC4-201ENST00000316052 SPP2Q13103 211 aa21.46■■□□□ 1.03
EXOSC4-201ENST00000316052 AGTPBP1Q9UPW5 1226 aa21.46■■□□□ 1.03
EXOSC4-201ENST00000316052 COL2A1P02458 1487 aaPredicted RBP21.45■■□□□ 1.03
EXOSC4-201ENST00000316052 SURF6O75683 361 aaKnown RBP21.45■■□□□ 1.02
EXOSC4-201ENST00000316052 CYP2E1P05181 493 aaPredicted RBP21.45■■□□□ 1.02
EXOSC4-201ENST00000316052 RLBP1P12271 317 aa21.45■■□□□ 1.02
EXOSC4-201ENST00000316052 CCL5P13501 91 aa21.45■■□□□ 1.02
EXOSC4-201ENST00000316052 TTC39AQ5SRH9 613 aa21.45■■□□□ 1.02
EXOSC4-201ENST00000316052 ADGRA1Q86SQ6 560 aa21.45■■□□□ 1.02
EXOSC4-201ENST00000316052 BIN2Q9UBW5 565 aaPredicted RBP21.45■■□□□ 1.02
EXOSC4-201ENST00000316052 ATAD5Q96QE3 1844 aa21.45■■□□□ 1.02
EXOSC4-201ENST00000316052 CAP2P40123 477 aa21.44■■□□□ 1.02
EXOSC4-201ENST00000316052 OS9Q13438 667 aaPredicted RBP21.44■■□□□ 1.02
EXOSC4-201ENST00000316052 CCDC158Q5M9N0 1113 aa21.44■■□□□ 1.02
EXOSC4-201ENST00000316052 NAA16Q6N069 864 aaPredicted RBP21.44■■□□□ 1.02
EXOSC4-201ENST00000316052 SMCR8Q8TEV9 937 aaPredicted RBP21.44■■□□□ 1.02
EXOSC4-201ENST00000316052 AATFQ9NY61 560 aaKnown RBP eCLIP21.44■■□□□ 1.02
EXOSC4-201ENST00000316052 ZBTB7BO15156 539 aaPredicted RBP21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 GJB1P08034 283 aa21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 FLT3LGP49771 235 aa21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 PPP4CP60510 307 aa21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 HNRNPUQ00839 825 aaKnown RBP eCLIP21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 ANKRD13CQ8N6S4 541 aa21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 ZNF280CQ8ND82 737 aa21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 RNF208Q9H0X6 261 aa21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 NOP58Q9Y2X3 529 aaKnown RBP21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 SIPA1L1O43166 1804 aa21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 CDK5RAP2Q96SN8 1893 aa21.43■■□□□ 1.02
EXOSC4-201ENST00000316052 H0YGN5 161 aa21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 ADCY3O60266 1144 aa21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 ELNP15502 786 aa21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 GJA8P48165 433 aa21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 MIER1Q8N108 512 aa21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 PROCA1Q8NCQ7 364 aaPredicted RBP21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 SLAIN1Q8ND83 568 aa21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 TGFBRAP1Q8WUH2 860 aa21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 PIH1D3Q9NQM4 214 aaKnown RBP21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 PI4KBQ9UBF8 816 aa21.42■■□□□ 1.02
EXOSC4-201ENST00000316052 TNPO2O14787 897 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 BAG3O95817 575 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 ZAP70P43403 619 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 HMGCS2P54868 508 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 UBXN2AP68543 259 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 JAG1P78504 1218 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 UBE2Q1Q7Z7E8 422 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 MAPKAPK5Q8IW41 473 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 ZNF512BQ96KM6 892 aaPredicted RBP21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 NOL10Q9BSC4 688 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 UNC93B1Q9H1C4 597 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 TLR7Q9NYK1 1049 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 HERC5Q9UII4 1024 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 DBNLQ9UJU6 430 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 COLQQ9Y215 455 aaPredicted RBP21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 SZT2Q5T011 3432 aa21.41■■□□□ 1.02
EXOSC4-201ENST00000316052 USP17L5A8MUK1 530 aa21.4■■□□□ 1.02
EXOSC4-201ENST00000316052 ITPRIPQ8IWB1 547 aa21.4■■□□□ 1.02
EXOSC4-201ENST00000316052 FTSJ3Q8IY81 847 aaKnown RBP21.4■■□□□ 1.02
EXOSC4-201ENST00000316052 NKX2-3Q8TAU0 364 aa21.4■■□□□ 1.02
EXOSC4-201ENST00000316052 CCDC8Q9H0W5 538 aaPredicted RBP21.4■■□□□ 1.02
EXOSC4-201ENST00000316052 DHX36Q9H2U1 1008 aaKnown RBP21.4■■□□□ 1.02
EXOSC4-201ENST00000316052 DNAJC18Q9H819 358 aa21.4■■□□□ 1.02
EXOSC4-201ENST00000316052 LOC285556D6RIA3 1793 aa21.4■■□□□ 1.02
EXOSC4-201ENST00000316052 PLCG2P16885 1265 aa21.39■■□□□ 1.01
EXOSC4-201ENST00000316052 SHROOM1Q2M3G4 852 aaPredicted RBP21.39■■□□□ 1.01
EXOSC4-201ENST00000316052 METTL16Q86W50 562 aaKnown RBP21.39■■□□□ 1.01
EXOSC4-201ENST00000316052 EAF2Q96CJ1 260 aaPredicted RBP21.39■■□□□ 1.01
EXOSC4-201ENST00000316052 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
EXOSC4-201ENST00000316052 FLT1P17948 1338 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 IRF5Q13568 498 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 FAM110CQ1W6H9 321 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 SH3D19Q5HYK7 790 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 PXYLP1Q8TE99 480 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 U2AF1L4Q8WU68 220 aaKnown RBP21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 TBC1D2Q9BYX2 928 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 ASCC2Q9H1I8 757 aaPredicted RBP21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 PALD1Q9ULE6 856 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 FOCADQ5VW36 1801 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
EXOSC4-201ENST00000316052 INHAP05111 366 aa21.37■■□□□ 1.01
EXOSC4-201ENST00000316052 DYNLL1P63167 89 aaKnown RBP21.37■■□□□ 1.01
EXOSC4-201ENST00000316052 FOXP4Q8IVH2 680 aaPredicted RBP21.37■■□□□ 1.01
EXOSC4-201ENST00000316052 DPF3Q92784 378 aa21.37■■□□□ 1.01
EXOSC4-201ENST00000316052 WDR18Q9BV38 432 aa21.37■■□□□ 1.01
EXOSC4-201ENST00000316052 SGPL1O95470 568 aa21.36■■□□□ 1.01
EXOSC4-201ENST00000316052 GCLCP48506 637 aaPredicted RBP21.36■■□□□ 1.01
EXOSC4-201ENST00000316052 FXR1P51114 621 aaKnown RBP eCLIP21.36■■□□□ 1.01
EXOSC4-201ENST00000316052 COA7Q96BR5 231 aa21.36■■□□□ 1.01
EXOSC4-201ENST00000316052 AS3MTQ9HBK9 375 aa21.36■■□□□ 1.01
EXOSC4-201ENST00000316052 SAP30BPQ9UHR5 308 aaKnown RBP21.36■■□□□ 1.01
EXOSC4-201ENST00000316052 NDUFB9Q9Y6M9 179 aa21.36■■□□□ 1.01
EXOSC4-201ENST00000316052 ASNSP08243 561 aa21.35■■□□□ 1.01
EXOSC4-201ENST00000316052 CYP7A1P22680 504 aa21.35■■□□□ 1.01
EXOSC4-201ENST00000316052 BACE1P56817 501 aa21.35■■□□□ 1.01
EXOSC4-201ENST00000316052 MTMR2Q13614 643 aa21.35■■□□□ 1.01
EXOSC4-201ENST00000316052 CEP85Q6P2H3 762 aa21.35■■□□□ 1.01
EXOSC4-201ENST00000316052 TAOK2Q9UL54 1235 aa21.35■■□□□ 1.01
EXOSC4-201ENST00000316052 PEX10O60683 326 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms