RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 N4BP1O75113 896 aaKnown RBP21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 MB21D2Q8IYB1 491 aaPredicted RBP21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 OSBP2Q969R2 916 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 PDE11AQ9HCR9 933 aa21.62■■□□□ 1.05
HERPUD2-201ENST00000311350 SPTLC2O15270 562 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 HSP90AA4PQ58FG1 418 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 CHST3Q7LGC8 479 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 TMEM139Q8IV31 216 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 SLC16A10Q8TF71 515 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 DHX58Q96C10 678 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 SERPINC1P01008 464 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 GTF2A1P52655 376 aaPredicted RBP21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 MCM6Q14566 821 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 SF3A1Q15459 793 aaKnown RBP21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 CFAP100Q494V2 611 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 MYSM1Q5VVJ2 828 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 CEP126Q9P2H0 1117 aa21.61■■□□□ 1.05
HERPUD2-201ENST00000311350 LRRC24Q50LG9 513 aa21.6■■□□□ 1.05
HERPUD2-201ENST00000311350 TOGARAM2Q6ZUX3 1019 aa21.6■■□□□ 1.05
HERPUD2-201ENST00000311350 QSER1Q2KHR3 1735 aa21.6■■□□□ 1.05
HERPUD2-201ENST00000311350 ZNF202O95125 648 aa21.6■■□□□ 1.05
HERPUD2-201ENST00000311350 CMA1P23946 247 aa21.6■■□□□ 1.05
HERPUD2-201ENST00000311350 PACS2Q86VP3 889 aa21.6■■□□□ 1.05
HERPUD2-201ENST00000311350 SUGCTQ9HAC7 445 aa21.6■■□□□ 1.05
HERPUD2-201ENST00000311350 PSD3Q9NYI0 1048 aa21.6■■□□□ 1.05
HERPUD2-201ENST00000311350 IKBKBO14920 756 aa21.59■■□□□ 1.05
HERPUD2-201ENST00000311350 APPBP2Q92624 585 aa21.59■■□□□ 1.05
HERPUD2-201ENST00000311350 SGIP1Q9BQI5 828 aa21.59■■□□□ 1.05
HERPUD2-201ENST00000311350 IRX2Q9BZI1 471 aaPredicted RBP21.59■■□□□ 1.05
HERPUD2-201ENST00000311350 GJB4Q9NTQ9 266 aa21.59■■□□□ 1.05
HERPUD2-201ENST00000311350 HPS5Q9UPZ3 1129 aa21.59■■□□□ 1.05
HERPUD2-201ENST00000311350 FOXP2O15409 715 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 ATP6V1AP38606 617 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 WWC2Q6AWC2 1192 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 TTLL7Q6ZT98 887 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 NCOA7Q8NI08 942 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 KIFC2Q96AC6 838 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 MPHOSPH8Q99549 860 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 KCPQ6ZWJ8 1503 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 PRC1O43663 620 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 TTLL5Q6EMB2 1281 aa21.58■■□□□ 1.05
HERPUD2-201ENST00000311350 MAP2K7O14733 419 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 ZSCAN12O43309 604 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 MYO1BO43795 1136 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 KARSQ15046 597 aaKnown RBP21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 ICE2Q659A1 982 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 LINC00116Q8NCU8 138 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 RABGGTAQ92696 567 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 DESI2Q9BSY9 194 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 TOP1P11387 765 aaKnown RBP21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 ITPK1Q13572 414 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 TTC39AQ5SRH9 613 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 ANO1Q5XXA6 986 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 COL23A1Q86Y22 540 aaPredicted RBP21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 VSTM4Q8IW00 320 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 IQUBQ8NA54 791 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 ISCA1Q9BUE6 129 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 PLA2G12BQ9BX93 195 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 TOMM22Q9NS69 142 aa21.57■■□□□ 1.04
HERPUD2-201ENST00000311350 KLF18A0A0U1RQI7 1052 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 FAM237AA0A1B0GTK4 181 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 KIF23Q02241 960 aaPredicted RBP21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 AXDND1Q5T1B0 1012 aaPredicted RBP21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 SYNE3Q6ZMZ3 975 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 INTS13Q9NVM9 706 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 GOLGA8BA8MQT2 603 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 TXLNAP40222 546 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 TRIM28Q13263 835 aaKnown RBP21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 PDILTQ8N807 584 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 GOLGA1Q92805 767 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 PLEKHA4Q9H4M7 779 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 C4BP0C0L5 1744 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 TAF1LQ8IZX4 1826 aa21.56■■□□□ 1.04
HERPUD2-201ENST00000311350 FGAP02671 866 aa21.55■■□□□ 1.04
HERPUD2-201ENST00000311350 ADKP55263 362 aaKnown RBP21.55■■□□□ 1.04
HERPUD2-201ENST00000311350 LEKR1Q6ZMV7 388 aa21.55■■□□□ 1.04
HERPUD2-201ENST00000311350 FLAD1Q8NFF5 587 aa21.55■■□□□ 1.04
HERPUD2-201ENST00000311350 PUF60Q9UHX1 559 aaKnown RBP21.55■■□□□ 1.04
HERPUD2-201ENST00000311350 FAN1Q9Y2M0 1017 aa21.55■■□□□ 1.04
HERPUD2-201ENST00000311350 LOC102724159A0A0B4J2E5 919 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 PPP6R2O75170 966 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 C4AP0C0L4 1744 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 PFKFB1P16118 471 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 ANTXR2P58335 489 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 SLC39A14Q15043 492 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 PWP2Q15269 919 aaKnown RBP21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 RALYLQ86SE5 291 aaKnown RBP21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 ZNF594Q96JF6 807 aaPredicted RBP21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 SLC4A9Q96Q91 983 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 GPHNQ9NQX3 736 aaPredicted RBP21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 FANCLQ9NW38 375 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 TUBE1Q9UJT0 475 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 MROH7-TTC4A0A0A0MT08 1334 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 A0A0U1RQJ8 604 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 CPLX1O14810 134 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 ARHGAP6O43182 974 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 TFRCP02786 760 aaKnown RBP21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 ATRIPQ8WXE1 791 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 XAGE2Q96GT9 111 aa21.54■■□□□ 1.04
HERPUD2-201ENST00000311350 PNKPQ96T60 521 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms