RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 EXOSC9Q06265 439 aaKnown RBP14.83□□□□□ -0.04
SMIM4-201ENST00000307106 PABPC4Q13310 644 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMIM4-201ENST00000307106 UTYO14607 1347 aa14.83□□□□□ -0.04
SMIM4-201ENST00000307106 CDK5RAP2Q96SN8 1893 aa14.82□□□□□ -0.04
SMIM4-201ENST00000307106 SPP2Q13103 211 aa14.82□□□□□ -0.04
SMIM4-201ENST00000307106 ANKRD44Q8N8A2 993 aa14.82□□□□□ -0.04
SMIM4-201ENST00000307106 LPIN2Q92539 896 aa14.82□□□□□ -0.04
SMIM4-201ENST00000307106 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
SMIM4-201ENST00000307106 XRCC5P13010 732 aaKnown RBP14.81□□□□□ -0.04
SMIM4-201ENST00000307106 HMGCS2P54868 508 aa14.81□□□□□ -0.04
SMIM4-201ENST00000307106 SOCS4Q8WXH5 440 aa14.81□□□□□ -0.04
SMIM4-201ENST00000307106 SYMPKQ92797 1274 aaKnown RBP14.81□□□□□ -0.04
SMIM4-201ENST00000307106 NUDT12Q9BQG2 462 aa14.81□□□□□ -0.04
SMIM4-201ENST00000307106 MORF4L1Q9UBU8 362 aa14.81□□□□□ -0.04
SMIM4-201ENST00000307106 SALL1Q9NSC2 1324 aa14.81□□□□□ -0.04
SMIM4-201ENST00000307106 MUC3AQ02505 3323 aa14.81□□□□□ -0.04
SMIM4-201ENST00000307106 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
SMIM4-201ENST00000307106 ZKSCAN1P17029 563 aaPredicted RBP14.8□□□□□ -0.04
SMIM4-201ENST00000307106 COL9A1P20849 921 aa14.8□□□□□ -0.04
SMIM4-201ENST00000307106 CCND3P30281 292 aaPredicted RBP14.8□□□□□ -0.04
SMIM4-201ENST00000307106 CACNB2Q08289 660 aaPredicted RBP14.8□□□□□ -0.04
SMIM4-201ENST00000307106 PICALMQ13492 652 aa14.8□□□□□ -0.04
SMIM4-201ENST00000307106 LHX8Q68G74 356 aa14.8□□□□□ -0.04
SMIM4-201ENST00000307106 ZNF280CQ8ND82 737 aa14.8□□□□□ -0.04
SMIM4-201ENST00000307106 DDX4Q9NQI0 724 aaKnown RBP14.8□□□□□ -0.04
SMIM4-201ENST00000307106 GAKO14976 1311 aa14.8□□□□□ -0.04
SMIM4-201ENST00000307106 FAM196BA6NMK8 535 aa14.79□□□□□ -0.04
SMIM4-201ENST00000307106 TRMT44Q8IYL2 757 aaKnown RBP14.79□□□□□ -0.04
SMIM4-201ENST00000307106 MYLIPQ8WY64 445 aa14.79□□□□□ -0.04
SMIM4-201ENST00000307106 TTC28Q96AY4 2481 aa14.79□□□□□ -0.04
SMIM4-201ENST00000307106 TBC1D2Q9BYX2 928 aa14.79□□□□□ -0.04
SMIM4-201ENST00000307106 OSBPL5Q9H0X9 879 aaPredicted RBP14.79□□□□□ -0.04
SMIM4-201ENST00000307106 SEMA6BQ9H3T3 888 aa14.79□□□□□ -0.04
SMIM4-201ENST00000307106 GNL3LQ9NVN8 582 aaKnown RBP14.79□□□□□ -0.04
SMIM4-201ENST00000307106 FOCADQ5VW36 1801 aa14.78□□□□□ -0.04
SMIM4-201ENST00000307106 EYA2O00167 538 aa14.78□□□□□ -0.04
SMIM4-201ENST00000307106 TBC1D12O60347 775 aa14.78□□□□□ -0.04
SMIM4-201ENST00000307106 SENP6Q9GZR1 1112 aaPredicted RBP14.78□□□□□ -0.04
SMIM4-201ENST00000307106 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.78□□□□□ -0.041e-6■■■□□ 18.5
SMIM4-201ENST00000307106 PRKAG2Q9UGJ0 569 aa14.78□□□□□ -0.04
SMIM4-201ENST00000307106 IRX3P78415 501 aaPredicted RBP14.77□□□□□ -0.05
SMIM4-201ENST00000307106 PDE3AQ14432 1141 aa14.77□□□□□ -0.05
SMIM4-201ENST00000307106 CCL14Q16627 93 aa14.77□□□□□ -0.05
SMIM4-201ENST00000307106 SH3D19Q5HYK7 790 aa14.77□□□□□ -0.05
SMIM4-201ENST00000307106 DZIP1Q86YF9 867 aaKnown RBP14.77□□□□□ -0.05
SMIM4-201ENST00000307106 ZGPATQ8N5A5 531 aaKnown RBP14.77□□□□□ -0.05
SMIM4-201ENST00000307106 DENND2AQ9ULE3 1009 aa14.77□□□□□ -0.05
SMIM4-201ENST00000307106 MYO9BQ13459 2157 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 SEMA3EO15041 775 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 PEX10O60683 326 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 FOSL2P15408 326 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 RGS2P41220 211 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 BTDP43251 543 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
SMIM4-201ENST00000307106 SHHQ15465 462 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 SLF2Q8IX21 1173 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 GPRC5AQ8NFJ5 357 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 TTYH1Q9H313 450 aaPredicted RBP14.76□□□□□ -0.05
SMIM4-201ENST00000307106 TXNRD2Q9NNW7 524 aa14.76□□□□□ -0.05
SMIM4-201ENST00000307106 USP17L5A8MUK1 530 aa14.75□□□□□ -0.05
SMIM4-201ENST00000307106 MAPK4P31152 587 aa14.75□□□□□ -0.05
SMIM4-201ENST00000307106 CAP2P40123 477 aa14.75□□□□□ -0.05
SMIM4-201ENST00000307106 PHKA1P46020 1223 aa14.75□□□□□ -0.05
SMIM4-201ENST00000307106 ATP2B3Q16720 1220 aa14.75□□□□□ -0.05
SMIM4-201ENST00000307106 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
SMIM4-201ENST00000307106 USP6NLQ92738 828 aa14.75□□□□□ -0.05
SMIM4-201ENST00000307106 P2RX7Q99572 595 aaKnown RBP14.75□□□□□ -0.05
SMIM4-201ENST00000307106 AS3MTQ9HBK9 375 aa14.75□□□□□ -0.05
SMIM4-201ENST00000307106 MROH7-TTC4A0A0A0MT08 1334 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 TNFRSF10AO00220 468 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 RFX5P48382 616 aaPredicted RBP14.74□□□□□ -0.05
SMIM4-201ENST00000307106 HERVK_113P62684 666 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 C9orf50Q5SZB4 431 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 ATG9AQ7Z3C6 839 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 GPR142Q7Z601 462 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 WDR63Q8IWG1 891 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 CCAR1Q8IX12 1150 aaKnown RBP14.74□□□□□ -0.05
SMIM4-201ENST00000307106 FAM163AQ96GL9 167 aaPredicted RBP14.74□□□□□ -0.05
SMIM4-201ENST00000307106 APBA2Q99767 749 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 ABCF2Q9UG63 623 aa14.74□□□□□ -0.05
SMIM4-201ENST00000307106 ZNFX1Q9P2E3 1918 aaKnown RBP14.74□□□□□ -0.05
SMIM4-201ENST00000307106 HOXA7P31268 230 aaPredicted RBP14.73□□□□□ -0.05
SMIM4-201ENST00000307106 RHBDL3P58872 404 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 RTP1P59025 263 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 SMAD3P84022 425 aaKnown RBP14.73□□□□□ -0.05
SMIM4-201ENST00000307106 MTMR2Q13614 643 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 RRP1BQ14684 758 aaKnown RBP14.73□□□□□ -0.05
SMIM4-201ENST00000307106 TJAP1Q5JTD0 557 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 MORN1Q5T089 497 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 PORCNQ9H237 461 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 TMOD4Q9NZQ9 345 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 RBPJLQ9UBG7 517 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 RAPGEFL1Q9UHV5 662 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 SALL2Q9Y467 1007 aaPredicted RBP14.73□□□□□ -0.05
SMIM4-201ENST00000307106 PLXNA1Q9UIW2 1896 aa14.73□□□□□ -0.05
SMIM4-201ENST00000307106 MYO5AQ9Y4I1 1855 aaKnown RBP14.73□□□□□ -0.05
SMIM4-201ENST00000307106 MYH1P12882 1939 aa14.72□□□□□ -0.05
SMIM4-201ENST00000307106 SMCHD1A6NHR9 2005 aa14.72□□□□□ -0.05
SMIM4-201ENST00000307106 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
SMIM4-201ENST00000307106 ERVK-9P63128 1117 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms