RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ABCF2Q9UG63 623 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
CSDC2-201ENST00000306149 hCG_1642624A0A1W2PR95 340 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 IKBKBO14920 756 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 CUTAO60888 179 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 IFNAR1P17181 557 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 MYL5Q02045 173 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 RTN1Q16799 776 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 SYT10Q6XYQ8 523 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 GRAMD1CQ8IYS0 662 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 OXER1Q8TDS5 423 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 ERO1AQ96HE7 468 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.4■□□□□ 0.38
CSDC2-201ENST00000306149 ZNF827Q17R98 1081 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 KRI1Q8N9T8 703 aaKnown RBP17.4■□□□□ 0.38
CSDC2-201ENST00000306149 PCDHB6Q9Y5E3 794 aa17.4■□□□□ 0.38
CSDC2-201ENST00000306149 MMP1P03956 469 aa17.39■□□□□ 0.37
CSDC2-201ENST00000306149 ZNF397Q8NF99 534 aaPredicted RBP17.39■□□□□ 0.37
CSDC2-201ENST00000306149 UTP14AQ9BVJ6 771 aaKnown RBP17.39■□□□□ 0.37
CSDC2-201ENST00000306149 KRT23Q9C075 422 aa17.39■□□□□ 0.37
CSDC2-201ENST00000306149 ANKRD36CQ5JPF3 1778 aa17.39■□□□□ 0.37
CSDC2-201ENST00000306149 IGSF3O75054 1194 aa17.39■□□□□ 0.37
CSDC2-201ENST00000306149 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
CSDC2-201ENST00000306149 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
CSDC2-201ENST00000306149 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
CSDC2-201ENST00000306149 CNNM2Q9H8M5 875 aa17.39■□□□□ 0.37
CSDC2-201ENST00000306149 PSDA5PKW4 1024 aaPredicted RBP17.38■□□□□ 0.37
CSDC2-201ENST00000306149 POLR2DO15514 142 aaKnown RBP17.38■□□□□ 0.37
CSDC2-201ENST00000306149 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
CSDC2-201ENST00000306149 OLFM4Q6UX06 510 aa17.38■□□□□ 0.37
CSDC2-201ENST00000306149 USP49Q70CQ1 688 aa17.38■□□□□ 0.37
CSDC2-201ENST00000306149 TRIM22Q8IYM9 498 aa17.38■□□□□ 0.37
CSDC2-201ENST00000306149 NACAP1Q9BZK3 213 aa17.38■□□□□ 0.37
CSDC2-201ENST00000306149 CYP7A1P22680 504 aa17.38■□□□□ 0.37
CSDC2-201ENST00000306149 ATP6V1AP38606 617 aa17.38■□□□□ 0.37
CSDC2-201ENST00000306149 ELF2Q15723 593 aa17.38■□□□□ 0.37
CSDC2-201ENST00000306149 LRRN4CLQ8ND94 238 aa17.38■□□□□ 0.37
CSDC2-201ENST00000306149 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
CSDC2-201ENST00000306149 ERICH2A1L162 156 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 FAM205CA6NFA0 338 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 CRKLP46109 303 aaKnown RBP17.37■□□□□ 0.37
CSDC2-201ENST00000306149 CHRNDQ07001 517 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 CRACR2BQ8N4Y2 399 aaPredicted RBP17.37■□□□□ 0.37
CSDC2-201ENST00000306149 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 MORC2Q9Y6X9 1032 aaPredicted RBP17.37■□□□□ 0.37
CSDC2-201ENST00000306149 ARAP2Q8WZ64 1704 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 CYP2D7A0A087X1C5 515 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 FAM237AA0A1B0GTK4 181 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 KIF20AO95235 890 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 SLU7O95391 586 aaKnown RBP17.37■□□□□ 0.37
CSDC2-201ENST00000306149 IGHMBP2P38935 993 aaKnown RBP17.37■□□□□ 0.37
CSDC2-201ENST00000306149 SART3Q15020 963 aaKnown RBP17.37■□□□□ 0.37
CSDC2-201ENST00000306149 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
CSDC2-201ENST00000306149 STAG1Q8WVM7 1258 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 CABP5Q9NP86 173 aa17.37■□□□□ 0.37
CSDC2-201ENST00000306149 GYG1P46976 350 aa17.36■□□□□ 0.37
CSDC2-201ENST00000306149 MDM2Q00987 491 aaPredicted RBP17.36■□□□□ 0.37
CSDC2-201ENST00000306149 HOMER1Q86YM7 354 aa17.36■□□□□ 0.37
CSDC2-201ENST00000306149 ZNF654Q8IZM8 581 aa17.36■□□□□ 0.37
CSDC2-201ENST00000306149 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
CSDC2-201ENST00000306149 FBXO2Q9UK22 296 aaPredicted RBP17.36■□□□□ 0.37
CSDC2-201ENST00000306149 ZHX1Q9UKY1 873 aaPredicted RBP17.36■□□□□ 0.37
CSDC2-201ENST00000306149 STK36Q9NRP7 1315 aa17.36■□□□□ 0.37
CSDC2-201ENST00000306149 PPARAQ07869 468 aa17.36■□□□□ 0.37
CSDC2-201ENST00000306149 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
CSDC2-201ENST00000306149 RAI14Q9P0K7 980 aa17.36■□□□□ 0.37
CSDC2-201ENST00000306149 NRDCO43847 1150 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 PRDM1O75626 825 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 TUBB4AP04350 444 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 KMT5BQ4FZB7 885 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 WASF1Q92558 559 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 UBAC1Q9BSL1 405 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 L2HGDHQ9H9P8 463 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 INTS13Q9NVM9 706 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 MAN1B1Q9UKM7 699 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 BAZ2BQ9UIF8 2168 aaKnown RBP17.35■□□□□ 0.37
CSDC2-201ENST00000306149 GABPB1Q06547 395 aaPredicted RBP17.35■□□□□ 0.37
CSDC2-201ENST00000306149 FMR1Q06787 632 aaKnown RBP eCLIP17.35■□□□□ 0.37
CSDC2-201ENST00000306149 SHISA4Q96DD7 197 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 DOCK2Q92608 1830 aa17.35■□□□□ 0.37
CSDC2-201ENST00000306149 PTPREP23469 700 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 POSTNQ15063 836 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 VPS54Q9P1Q0 977 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 DISP2A7MBM2 1401 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 CAMTA2O94983 1202 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 DEXIO95424 95 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 TOP1P11387 765 aaKnown RBP17.34■□□□□ 0.37
CSDC2-201ENST00000306149 TNKSO95271 1327 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 DYNLL1P63167 89 aaKnown RBP17.34■□□□□ 0.37
CSDC2-201ENST00000306149 ITPK1Q13572 414 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 EARS2Q5JPH6 523 aaKnown RBP17.34■□□□□ 0.37
CSDC2-201ENST00000306149 VSTM4Q8IW00 320 aa17.34■□□□□ 0.37
CSDC2-201ENST00000306149 FAM177A1Q8N128 213 aaPredicted RBP17.34■□□□□ 0.37
CSDC2-201ENST00000306149 TIAM2Q8IVF5 1701 aa17.33■□□□□ 0.37
CSDC2-201ENST00000306149 PNPLA7Q6ZV29 1317 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 GNAT2P19087 354 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 CASP1P29466 404 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 EVX2Q03828 476 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms