RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 IRX2Q9BZI1 471 aaPredicted RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 NRXN2Q9P2S2 1712 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 N4BP1O75113 896 aaKnown RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 CYP19A1P11511 503 aaPredicted RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 PNOCQ13519 176 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 ARHGAP29Q52LW3 1261 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 EARS2Q5JPH6 523 aaKnown RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 ZNF662Q6ZS27 426 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 UBE3BQ7Z3V4 1068 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 IRF2BP1Q8IU81 584 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 TTC5Q8N0Z6 440 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 TTYH3Q9C0H2 523 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 EPB41L4AQ9HCS5 686 aaPredicted RBP6.29□□□□□ -1.4
VPS50-202ENST00000305866 MAN1B1Q9UKM7 699 aa6.29□□□□□ -1.4
VPS50-202ENST00000305866 PPP1R3GB7ZBB8 358 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 CUTAO60888 179 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 GUCY1A2P33402 732 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 ERVK-24P63145 666 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 IL17AQ16552 155 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 HSP90AB3PQ58FF7 597 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 TTLL7Q6ZT98 887 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 CHST3Q7LGC8 479 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 ZNF579Q8NAF0 562 aaKnown RBP6.28□□□□□ -1.4
VPS50-202ENST00000305866 SIL1Q9H173 461 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 FANCLQ9NW38 375 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 MYH10P35580 1976 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 A0A1B0GUL7 405 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 GRIN2DO15399 1336 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 ADORA1P30542 326 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 TTF1Q15361 905 aaPredicted RBP6.28□□□□□ -1.4
VPS50-202ENST00000305866 GPR161Q8N6U8 529 aaKnown RBP6.28□□□□□ -1.4
VPS50-202ENST00000305866 DHX58Q96C10 678 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 ZNF396Q96N95 335 aaPredicted RBP6.28□□□□□ -1.4
VPS50-202ENST00000305866 ADD3Q9UEY8 706 aaKnown RBP6.28□□□□□ -1.4
VPS50-202ENST00000305866 THRAP3Q9Y2W1 955 aaKnown RBP6.28□□□□□ -1.4
VPS50-202ENST00000305866 ADGRG1Q9Y653 693 aa6.28□□□□□ -1.4
VPS50-202ENST00000305866 ITIH6Q6UXX5 1313 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 MROH5Q6ZUA9 1318 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 SPTLC2O15270 562 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 STX10O60499 249 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 CCT2P78371 535 aaKnown RBP6.27□□□□□ -1.4
VPS50-202ENST00000305866 OS9Q13438 667 aaPredicted RBP6.27□□□□□ -1.4
VPS50-202ENST00000305866 KRBA2Q6ZNG9 492 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 TMC6Q7Z403 805 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 NLRP10Q86W26 655 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 NEK11Q8NG66 645 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 TTLL11Q8NHH1 800 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 KCNG4Q8TDN1 519 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 RABGGTAQ92696 567 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 SUGCTQ9HAC7 445 aa6.27□□□□□ -1.4
VPS50-202ENST00000305866 LRRIQ3A6PVS8 624 aaPredicted RBP6.27□□□□□ -1.41
VPS50-202ENST00000305866 M0R2N6 131 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 NKRFO15226 690 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS50-202ENST00000305866 GYPCP04921 128 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 IL6STP40189 918 aaPredicted RBP6.27□□□□□ -1.41
VPS50-202ENST00000305866 GYS2P54840 703 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 SEMA3FQ13275 785 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 PKN1Q16512 942 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 WDR93Q6P2C0 686 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 SRLQ86TD4 932 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 ENOX1Q8TC92 643 aaKnown RBP6.27□□□□□ -1.41
VPS50-202ENST00000305866 IPO4Q8TEX9 1081 aaKnown RBP6.27□□□□□ -1.41
VPS50-202ENST00000305866 TMEM87BQ96K49 555 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 CLIC6Q96NY7 704 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 SLC4A9Q96Q91 983 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 PANX2Q96RD6 677 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 CARD6Q9BX69 1037 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 TRIM66O15016 1216 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 TEX33O43247 280 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 PPP2R5BQ15173 497 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 SLC9C2Q5TAH2 1124 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 EMC10Q5UCC4 262 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 LRRC31Q6UY01 552 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 USP49Q70CQ1 688 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 C4orf32Q8N8J7 132 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 BBXQ8WY36 941 aaPredicted RBP6.27□□□□□ -1.41
VPS50-202ENST00000305866 EXOC4Q96A65 974 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 MPHOSPH8Q99549 860 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 ADAM21Q9UKJ8 722 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 PCDHA5Q9Y5H7 936 aa6.27□□□□□ -1.41
VPS50-202ENST00000305866 PCP11498 1178 aaKnown RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 PTPREP23469 700 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 MCAMP43121 646 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 TIMM10P62072 90 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 WDR59Q6PJI9 974 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 FILIP1Q7Z7B0 1213 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 CEP57L1Q8IYX8 460 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 BICD2Q8TD16 824 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 CDCA7Q9BWT1 371 aaPredicted RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 SRRTQ9BXP5 876 aaKnown RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 IQSEC3Q9UPP2 1182 aaPredicted RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 ARHGAP6O43182 974 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 OAS2P29728 719 aaKnown RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 CTSWP56202 376 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 SF3A1Q15459 793 aaKnown RBP6.26□□□□□ -1.41
VPS50-202ENST00000305866 PACS2Q86VP3 889 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 ZNF507Q8TCN5 953 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 STAG1Q8WVM7 1258 aa6.26□□□□□ -1.41
VPS50-202ENST00000305866 STRN4Q9NRL3 753 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms