RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 SH3RF3Q8TEJ3 882 aaPredicted RBP21.23■□□□□ 0.99
TFF3-201ENST00000291525 SH3TC2Q8TF17 1288 aa21.23■□□□□ 0.99
TFF3-201ENST00000291525 TRIM47Q96LD4 638 aa21.23■□□□□ 0.99
TFF3-201ENST00000291525 AATFQ9NY61 560 aaKnown RBP eCLIP21.23■□□□□ 0.99
TFF3-201ENST00000291525 PI4KBQ9UBF8 816 aa21.23■□□□□ 0.99
TFF3-201ENST00000291525 PNMA3Q9UL41 463 aa21.23■□□□□ 0.99
TFF3-201ENST00000291525 MYPNQ86TC9 1320 aa21.23■□□□□ 0.99
TFF3-201ENST00000291525 FOCADQ5VW36 1801 aa21.22■□□□□ 0.99
TFF3-201ENST00000291525 ECM2O94769 699 aaPredicted RBP21.22■□□□□ 0.99
TFF3-201ENST00000291525 CYP2E1P05181 493 aaPredicted RBP21.22■□□□□ 0.99
TFF3-201ENST00000291525 OSBPP22059 807 aa21.22■□□□□ 0.99
TFF3-201ENST00000291525 CEP85Q6P2H3 762 aa21.22■□□□□ 0.99
TFF3-201ENST00000291525 SMCR8Q8TEV9 937 aaPredicted RBP21.22■□□□□ 0.99
TFF3-201ENST00000291525 AGTPBP1Q9UPW5 1226 aa21.22■□□□□ 0.99
TFF3-201ENST00000291525 CDK5RAP2Q96SN8 1893 aa21.22■□□□□ 0.99
TFF3-201ENST00000291525 FAM196BA6NMK8 535 aa21.21■□□□□ 0.99
TFF3-201ENST00000291525 SLURP2P0DP57 97 aa21.21■□□□□ 0.99
TFF3-201ENST00000291525 PPP4CP60510 307 aa21.21■□□□□ 0.99
TFF3-201ENST00000291525 HSP90AB4PQ58FF6 505 aa21.21■□□□□ 0.99
TFF3-201ENST00000291525 PROCA1Q8NCQ7 364 aaPredicted RBP21.21■□□□□ 0.99
TFF3-201ENST00000291525 TRIM34Q9BYJ4 488 aa21.21■□□□□ 0.99
TFF3-201ENST00000291525 AS3MTQ9HBK9 375 aa21.21■□□□□ 0.99
TFF3-201ENST00000291525 DBNLQ9UJU6 430 aaKnown RBP21.21■□□□□ 0.99
TFF3-201ENST00000291525 MYO5AQ9Y4I1 1855 aaKnown RBP21.21■□□□□ 0.99
TFF3-201ENST00000291525 CENPFP49454 3210 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 CTGFP29279 349 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 GRK4P32298 578 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 CAP2P40123 477 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 ZAP70P43403 619 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 CERS3Q8IU89 383 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 ZNF280CQ8ND82 737 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 GCC1Q96CN9 775 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 LOC285556D6RIA3 1793 aa21.2■□□□□ 0.98
TFF3-201ENST00000291525 USP17L5A8MUK1 530 aa21.19■□□□□ 0.98
TFF3-201ENST00000291525 MYCP01106 439 aaPredicted RBP21.19■□□□□ 0.98
TFF3-201ENST00000291525 PABPC4Q13310 644 aaKnown RBP eCLIP21.19■□□□□ 0.98
TFF3-201ENST00000291525 TMED8Q6PL24 325 aaPredicted RBP21.19■□□□□ 0.98
TFF3-201ENST00000291525 TGFBRAP1Q8WUH2 860 aa21.19■□□□□ 0.98
TFF3-201ENST00000291525 CCDC8Q9H0W5 538 aaPredicted RBP21.19■□□□□ 0.98
TFF3-201ENST00000291525 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.19■□□□□ 0.98
TFF3-201ENST00000291525 UBXN2AP68543 259 aa21.18■□□□□ 0.98
TFF3-201ENST00000291525 SPP2Q13103 211 aa21.18■□□□□ 0.98
TFF3-201ENST00000291525 CCDC84Q86UT8 332 aaPredicted RBP21.18■□□□□ 0.98
TFF3-201ENST00000291525 MAPKAPK5Q8IW41 473 aa21.18■□□□□ 0.98
TFF3-201ENST00000291525 CRACR2BQ8N4Y2 399 aaPredicted RBP21.18■□□□□ 0.98
TFF3-201ENST00000291525 PANK1Q8TE04 598 aa21.18■□□□□ 0.98
TFF3-201ENST00000291525 EAF2Q96CJ1 260 aaPredicted RBP21.18■□□□□ 0.98
TFF3-201ENST00000291525 TLR7Q9NYK1 1049 aaKnown RBP21.18■□□□□ 0.98
TFF3-201ENST00000291525 FLT1P17948 1338 aa21.18■□□□□ 0.98
TFF3-201ENST00000291525 SIPA1L1O43166 1804 aa21.18■□□□□ 0.98
TFF3-201ENST00000291525 IDH1O75874 414 aaKnown RBP21.17■□□□□ 0.98
TFF3-201ENST00000291525 HLA-DOAP06340 250 aa21.17■□□□□ 0.98
TFF3-201ENST00000291525 ASNSP08243 561 aa21.17■□□□□ 0.98
TFF3-201ENST00000291525 FOXP4Q8IVH2 680 aaPredicted RBP21.17■□□□□ 0.98
TFF3-201ENST00000291525 SLAIN1Q8ND83 568 aa21.17■□□□□ 0.98
TFF3-201ENST00000291525 NKX2-3Q8TAU0 364 aa21.17■□□□□ 0.98
TFF3-201ENST00000291525 PIH1D3Q9NQM4 214 aaKnown RBP21.17■□□□□ 0.98
TFF3-201ENST00000291525 BIN2Q9UBW5 565 aaPredicted RBP21.17■□□□□ 0.98
TFF3-201ENST00000291525 CYP7A1P22680 504 aa21.16■□□□□ 0.98
TFF3-201ENST00000291525 PRKCZQ05513 592 aa21.16■□□□□ 0.98
TFF3-201ENST00000291525 ADGRA1Q86SQ6 560 aa21.16■□□□□ 0.98
TFF3-201ENST00000291525 AACSQ86V21 672 aa21.16■□□□□ 0.98
TFF3-201ENST00000291525 GINM1Q9NU53 330 aa21.16■□□□□ 0.98
TFF3-201ENST00000291525 EXOC6BQ9Y2D4 811 aa21.16■□□□□ 0.98
TFF3-201ENST00000291525 TNPO2O14787 897 aaKnown RBP21.15■□□□□ 0.98
TFF3-201ENST00000291525 GCLCP48506 637 aaPredicted RBP21.15■□□□□ 0.98
TFF3-201ENST00000291525 MAP3K12Q12852 859 aa21.15■□□□□ 0.98
TFF3-201ENST00000291525 FAM110CQ1W6H9 321 aa21.15■□□□□ 0.98
TFF3-201ENST00000291525 TREML2Q5T2D2 321 aa21.15■□□□□ 0.98
TFF3-201ENST00000291525 CHMP4BQ9H444 224 aaKnown RBP21.15■□□□□ 0.98
TFF3-201ENST00000291525 MYH1P12882 1939 aa21.15■□□□□ 0.98
TFF3-201ENST00000291525 HMMRO75330 724 aa21.14■□□□□ 0.97
TFF3-201ENST00000291525 HMGCS2P54868 508 aa21.14■□□□□ 0.97
TFF3-201ENST00000291525 SH3D19Q5HYK7 790 aa21.14■□□□□ 0.97
TFF3-201ENST00000291525 ANKRD13CQ8N6S4 541 aa21.14■□□□□ 0.97
TFF3-201ENST00000291525 COA7Q96BR5 231 aa21.14■□□□□ 0.97
TFF3-201ENST00000291525 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.97
TFF3-201ENST00000291525 USP5P45974 858 aa21.13■□□□□ 0.97
TFF3-201ENST00000291525 MTFR1Q15390 333 aa21.13■□□□□ 0.97
TFF3-201ENST00000291525 METTL16Q86W50 562 aaKnown RBP21.13■□□□□ 0.97
TFF3-201ENST00000291525 RPAP2Q8IXW5 612 aaPredicted RBP21.13■□□□□ 0.97
TFF3-201ENST00000291525 MAGEB6Q8N7X4 407 aa21.13■□□□□ 0.97
TFF3-201ENST00000291525 WDR18Q9BV38 432 aa21.13■□□□□ 0.97
TFF3-201ENST00000291525 TMOD4Q9NZQ9 345 aa21.13■□□□□ 0.97
TFF3-201ENST00000291525 PALD1Q9ULE6 856 aa21.13■□□□□ 0.97
TFF3-201ENST00000291525 RRP1BQ14684 758 aaKnown RBP21.12■□□□□ 0.97
TFF3-201ENST00000291525 TTF1Q15361 905 aaPredicted RBP21.12■□□□□ 0.97
TFF3-201ENST00000291525 CLASRPQ8N2M8 674 aaKnown RBP21.12■□□□□ 0.97
TFF3-201ENST00000291525 RHPN1Q8TCX5 695 aa21.12■□□□□ 0.97
TFF3-201ENST00000291525 SAP30BPQ9UHR5 308 aaKnown RBP21.12■□□□□ 0.97
TFF3-201ENST00000291525 GABRQQ9UN88 632 aa21.12■□□□□ 0.97
TFF3-201ENST00000291525 C19orf81C9J6K1 198 aa21.11■□□□□ 0.97
TFF3-201ENST00000291525 ADCY3O60266 1144 aa21.11■□□□□ 0.97
TFF3-201ENST00000291525 CCL5P13501 91 aa21.11■□□□□ 0.97
TFF3-201ENST00000291525 FLT3LGP49771 235 aa21.11■□□□□ 0.97
TFF3-201ENST00000291525 DYNLL1P63167 89 aaKnown RBP21.11■□□□□ 0.97
TFF3-201ENST00000291525 IRX3P78415 501 aaPredicted RBP21.11■□□□□ 0.97
TFF3-201ENST00000291525 IRF5Q13568 498 aa21.11■□□□□ 0.97
TFF3-201ENST00000291525 PXYLP1Q8TE99 480 aa21.11■□□□□ 0.97
TFF3-201ENST00000291525 KIF1BPQ96EK5 621 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms